RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 RFX5P48382 616 aaPredicted RBP17.42■□□□□ 0.38
TTC3-219ENST00000485402 TAF7LQ5H9L4 462 aa17.42■□□□□ 0.38
TTC3-219ENST00000485402 LEO1Q8WVC0 666 aaPredicted RBP17.42■□□□□ 0.38
TTC3-219ENST00000485402 UBN2Q6ZU65 1347 aa17.42■□□□□ 0.38
TTC3-219ENST00000485402 IRS4O14654 1257 aaPredicted RBP17.41■□□□□ 0.38
TTC3-219ENST00000485402 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
TTC3-219ENST00000485402 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
TTC3-219ENST00000485402 COPRSQ9NQ92 184 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 THSD7AQ9UPZ6 1657 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 COL15A1P39059 1388 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 SLC27A2O14975 620 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 TFCP2Q12800 502 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 PSMA5P28066 241 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 RBM6P78332 1123 aaKnown RBP17.41■□□□□ 0.38
TTC3-219ENST00000485402 NECTIN1Q15223 517 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 FAM196AQ6ZSG2 479 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 ANKRD7Q92527 254 aa17.41■□□□□ 0.38
TTC3-219ENST00000485402 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
TTC3-219ENST00000485402 NUP188Q5SRE5 1749 aa17.4■□□□□ 0.38
TTC3-219ENST00000485402 SUSD4Q5VX71 490 aa17.4■□□□□ 0.38
TTC3-219ENST00000485402 CEP135Q66GS9 1140 aa17.4■□□□□ 0.38
TTC3-219ENST00000485402 USP27XA6NNY8 438 aa17.4■□□□□ 0.38
TTC3-219ENST00000485402 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
TTC3-219ENST00000485402 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
TTC3-219ENST00000485402 GUCY1B3Q02153 619 aa17.39■□□□□ 0.37
TTC3-219ENST00000485402 ZNF34Q8IZ26 560 aa17.39■□□□□ 0.37
TTC3-219ENST00000485402 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
TTC3-219ENST00000485402 LRRC24Q50LG9 513 aa17.39■□□□□ 0.37
TTC3-219ENST00000485402 RNF20Q5VTR2 975 aa17.39■□□□□ 0.37
TTC3-219ENST00000485402 PUS3Q9BZE2 481 aaKnown RBP17.39■□□□□ 0.37
TTC3-219ENST00000485402 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
TTC3-219ENST00000485402 SMTNL1A8MU46 457 aa17.39■□□□□ 0.37
TTC3-219ENST00000485402 BRF1Q92994 677 aa17.39■□□□□ 0.37
TTC3-219ENST00000485402 PGBD1Q96JS3 809 aa17.39■□□□□ 0.37
TTC3-219ENST00000485402 RTCBQ9Y3I0 505 aaKnown RBP17.39■□□□□ 0.37
TTC3-219ENST00000485402 EPB41L2O43491 1005 aaKnown RBP17.38■□□□□ 0.37
TTC3-219ENST00000485402 IFIT5Q13325 482 aaKnown RBP17.38■□□□□ 0.37
TTC3-219ENST00000485402 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
TTC3-219ENST00000485402 DDX19AQ9NUU7 478 aaKnown RBP17.38■□□□□ 0.37
TTC3-219ENST00000485402 CTIFO43310 598 aaKnown RBP17.38■□□□□ 0.37
TTC3-219ENST00000485402 CHGBP05060 677 aa17.38■□□□□ 0.37
TTC3-219ENST00000485402 ZNF652Q9Y2D9 606 aa17.38■□□□□ 0.37
TTC3-219ENST00000485402 SKILP12757 684 aa17.38■□□□□ 0.37
TTC3-219ENST00000485402 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 ERICH4A6NGS2 130 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 GTF2E1P29083 439 aaPredicted RBP17.37■□□□□ 0.37
TTC3-219ENST00000485402 USPL1Q5W0Q7 1092 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 UTP14AQ9BVJ6 771 aaKnown RBP17.37■□□□□ 0.37
TTC3-219ENST00000485402 LRRC4BQ9NT99 713 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 OGFRQ9NZT2 677 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 BTAF1O14981 1849 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 ZPR1O75312 459 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 PTPN14Q15678 1187 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 CLSTN2Q9H4D0 955 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 GREM2Q9H772 168 aa17.37■□□□□ 0.37
TTC3-219ENST00000485402 KIF20AO95235 890 aa17.36■□□□□ 0.37
TTC3-219ENST00000485402 RXRBP28702 533 aa17.36■□□□□ 0.37
TTC3-219ENST00000485402 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
TTC3-219ENST00000485402 AK7Q96M32 723 aa17.36■□□□□ 0.37
TTC3-219ENST00000485402 TM6SF1Q9BZW5 370 aa17.36■□□□□ 0.37
TTC3-219ENST00000485402 ZNF215Q9UL58 517 aaPredicted RBP17.36■□□□□ 0.37
TTC3-219ENST00000485402 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
TTC3-219ENST00000485402 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
TTC3-219ENST00000485402 CCDC129Q6ZRS4 1044 aa17.36■□□□□ 0.37
TTC3-219ENST00000485402 C11orf57Q6ZUT1 292 aaPredicted RBP17.36■□□□□ 0.37
TTC3-219ENST00000485402 TTLL11Q8NHH1 800 aa17.36■□□□□ 0.37
TTC3-219ENST00000485402 ITGA6P23229 1130 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 MAP4K1Q92918 833 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 CNTNAP4Q9C0A0 1308 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 CTSWP56202 376 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 TIMM10P62072 90 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
TTC3-219ENST00000485402 FEZ1Q99689 392 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 CTNNA3Q9UI47 895 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 NUP98P52948 1817 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 EYA2O00167 538 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 TNNI3KQ59H18 835 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 FPGT-TNNI3KV9GXZ4 949 aa17.35■□□□□ 0.37
TTC3-219ENST00000485402 PDE8AO60658 829 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 RPS6KB1P23443 525 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
TTC3-219ENST00000485402 GORABQ5T7V8 394 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 ARHGEF1Q92888 912 aaKnown RBP17.34■□□□□ 0.37
TTC3-219ENST00000485402 PAXBP1Q9Y5B6 917 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 ATG9AQ7Z3C6 839 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 RFC4P35249 363 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
TTC3-219ENST00000485402 TOB2Q14106 344 aaPredicted RBP17.34■□□□□ 0.37
TTC3-219ENST00000485402 ANKRD1Q15327 319 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 LDHAL6AQ6ZMR3 332 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 PLA2G4DQ86XP0 818 aa17.34■□□□□ 0.37
TTC3-219ENST00000485402 CCAR1Q8IX12 1150 aaKnown RBP17.34■□□□□ 0.37
TTC3-219ENST00000485402 PARP10Q53GL7 1025 aa17.33■□□□□ 0.37
TTC3-219ENST00000485402 RC3H1Q5TC82 1133 aaKnown RBP17.33■□□□□ 0.37
TTC3-219ENST00000485402 CCDC69A6NI79 296 aa17.33■□□□□ 0.36
TTC3-219ENST00000485402 IL15P40933 162 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms