RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 MXD3Q9BW11 206 aa21.98■■□□□ 1.11
SREBF1-213ENST00000485080 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
SREBF1-213ENST00000485080 ITGBL1O95965 494 aaPredicted RBP21.97■■□□□ 1.11
SREBF1-213ENST00000485080 HSPA6P17066 643 aa21.97■■□□□ 1.11
SREBF1-213ENST00000485080 HSP90AB4PQ58FF6 505 aa21.97■■□□□ 1.11
SREBF1-213ENST00000485080 SAMD7Q7Z3H4 446 aa21.97■■□□□ 1.11
SREBF1-213ENST00000485080 OGFOD1Q8N543 542 aa21.97■■□□□ 1.11
SREBF1-213ENST00000485080 CLEC11AQ9Y240 323 aa21.97■■□□□ 1.11
SREBF1-213ENST00000485080 ARAP2Q8WZ64 1704 aa21.97■■□□□ 1.11
SREBF1-213ENST00000485080 SEMA3EO15041 775 aa21.96■■□□□ 1.11
SREBF1-213ENST00000485080 TIMM10P62072 90 aa21.96■■□□□ 1.11
SREBF1-213ENST00000485080 TBC1D22AQ8WUA7 517 aa21.96■■□□□ 1.11
SREBF1-213ENST00000485080 FBXW7Q969H0 707 aa21.96■■□□□ 1.11
SREBF1-213ENST00000485080 MYOZ2Q9NPC6 264 aa21.96■■□□□ 1.11
SREBF1-213ENST00000485080 GNL3LQ9NVN8 582 aaKnown RBP21.96■■□□□ 1.11
SREBF1-213ENST00000485080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.96■■□□□ 1.11
SREBF1-213ENST00000485080 EGFRP00533 1210 aa21.95■■□□□ 1.1
SREBF1-213ENST00000485080 KIF4BQ2VIQ3 1234 aa21.95■■□□□ 1.1
SREBF1-213ENST00000485080 TBC1D10BQ4KMP7 808 aaPredicted RBP21.95■■□□□ 1.1
SREBF1-213ENST00000485080 ERC1Q8IUD2 1116 aa21.95■■□□□ 1.1
SREBF1-213ENST00000485080 CNTROBQ8N137 903 aa21.95■■□□□ 1.1
SREBF1-213ENST00000485080 XAGE2Q96GT9 111 aa21.95■■□□□ 1.1
SREBF1-213ENST00000485080 SUGT1Q9Y2Z0 365 aa21.95■■□□□ 1.1
SREBF1-213ENST00000485080 PASKQ96RG2 1323 aa21.95■■□□□ 1.1
SREBF1-213ENST00000485080 OS9Q13438 667 aaPredicted RBP21.94■■□□□ 1.1
SREBF1-213ENST00000485080 MFSD14BQ5SR56 506 aa21.94■■□□□ 1.1
SREBF1-213ENST00000485080 MTMR14Q8NCE2 650 aa21.94■■□□□ 1.1
SREBF1-213ENST00000485080 HDAC9Q9UKV0 1011 aa21.94■■□□□ 1.1
SREBF1-213ENST00000485080 PDS5AQ29RF7 1337 aaKnown RBP21.94■■□□□ 1.1
SREBF1-213ENST00000485080 FRAT2O75474 233 aaPredicted RBP21.93■■□□□ 1.1
SREBF1-213ENST00000485080 ADORA1P30542 326 aa21.93■■□□□ 1.1
SREBF1-213ENST00000485080 AAMPQ13685 434 aa21.93■■□□□ 1.1
SREBF1-213ENST00000485080 MAP1SQ66K74 1059 aaPredicted RBP21.93■■□□□ 1.1
SREBF1-213ENST00000485080 CCDC102BQ68D86 513 aa21.93■■□□□ 1.1
SREBF1-213ENST00000485080 KIAA0825Q8IV33 1275 aa21.93■■□□□ 1.1
SREBF1-213ENST00000485080 WDR66Q8TBY9 1149 aa21.93■■□□□ 1.1
SREBF1-213ENST00000485080 ZBED3Q96IU2 234 aaPredicted RBP21.93■■□□□ 1.1
SREBF1-213ENST00000485080 PHKA1P46020 1223 aa21.92■■□□□ 1.1
SREBF1-213ENST00000485080 TNNI3KQ59H18 835 aa21.92■■□□□ 1.1
SREBF1-213ENST00000485080 DENND2AQ9ULE3 1009 aa21.92■■□□□ 1.1
SREBF1-213ENST00000485080 IQSEC3Q9UPP2 1182 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-213ENST00000485080 FPGT-TNNI3KV9GXZ4 949 aa21.92■■□□□ 1.1
SREBF1-213ENST00000485080 SALL1Q9NSC2 1324 aa21.91■■□□□ 1.1
SREBF1-213ENST00000485080 RAB11FIP3O75154 756 aa21.91■■□□□ 1.1
SREBF1-213ENST00000485080 APLP1P51693 650 aa21.91■■□□□ 1.1
SREBF1-213ENST00000485080 MRIQ9BWK5 157 aa21.91■■□□□ 1.1
SREBF1-213ENST00000485080 JAG2Q9Y219 1238 aa21.91■■□□□ 1.1
SREBF1-213ENST00000485080 EXOC6BQ9Y2D4 811 aa21.91■■□□□ 1.1
SREBF1-213ENST00000485080 PITPNM2Q9BZ72 1349 aa21.9■■□□□ 1.1
SREBF1-213ENST00000485080 HDLBPQ00341 1268 aaKnown RBP21.9■■□□□ 1.1
SREBF1-213ENST00000485080 RBM26Q5T8P6 1007 aaKnown RBP21.9■■□□□ 1.1
SREBF1-213ENST00000485080 CDC37L1Q7L3B6 337 aa21.9■■□□□ 1.1
SREBF1-213ENST00000485080 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
SREBF1-213ENST00000485080 NEUROD6Q96NK8 337 aa21.9■■□□□ 1.1
SREBF1-213ENST00000485080 COL1A1P02452 1464 aaPredicted RBP21.9■■□□□ 1.1
SREBF1-213ENST00000485080 WNT10BO00744 389 aa21.89■■□□□ 1.09
SREBF1-213ENST00000485080 CHAF1AQ13111 956 aaPredicted RBP21.89■■□□□ 1.09
SREBF1-213ENST00000485080 SCARF1Q14162 830 aa21.89■■□□□ 1.09
SREBF1-213ENST00000485080 ZNF512BQ96KM6 892 aaPredicted RBP21.89■■□□□ 1.09
SREBF1-213ENST00000485080 CRBNQ96SW2 442 aa21.89■■□□□ 1.09
SREBF1-213ENST00000485080 SERPINA10Q9UK55 444 aa21.89■■□□□ 1.09
SREBF1-213ENST00000485080 MYH13Q9UKX3 1938 aa21.88■■□□□ 1.09
SREBF1-213ENST00000485080 ARID4AP29374 1257 aaPredicted RBP21.88■■□□□ 1.09
SREBF1-213ENST00000485080 RHPN1Q8TCX5 695 aa21.88■■□□□ 1.09
SREBF1-213ENST00000485080 KIF1BPQ96EK5 621 aa21.88■■□□□ 1.09
SREBF1-213ENST00000485080 POLR2AP24928 1970 aaKnown RBP21.87■■□□□ 1.09
SREBF1-213ENST00000485080 UQCRFS1P1P0C7P4 283 aa21.87■■□□□ 1.09
SREBF1-213ENST00000485080 RASGRF1Q13972 1273 aa21.87■■□□□ 1.09
SREBF1-213ENST00000485080 EAF2Q96CJ1 260 aaPredicted RBP21.87■■□□□ 1.09
SREBF1-213ENST00000485080 TTF2Q9UNY4 1162 aaKnown RBP21.87■■□□□ 1.09
SREBF1-213ENST00000485080 PCDHB15Q9Y5E8 787 aa21.87■■□□□ 1.09
SREBF1-213ENST00000485080 DLGAP5Q15398 846 aa21.86■■□□□ 1.09
SREBF1-213ENST00000485080 NBPF9Q3BBW0 867 aa21.86■■□□□ 1.09
SREBF1-213ENST00000485080 GORABQ5T7V8 394 aa21.86■■□□□ 1.09
SREBF1-213ENST00000485080 DCPSQ96C86 337 aaKnown RBP21.86■■□□□ 1.09
SREBF1-213ENST00000485080 DCTPP1Q9H773 170 aa21.86■■□□□ 1.09
SREBF1-213ENST00000485080 GGA3Q9NZ52 723 aa21.86■■□□□ 1.09
SREBF1-213ENST00000485080 SUPT16HQ9Y5B9 1047 aaKnown RBP21.86■■□□□ 1.09
SREBF1-213ENST00000485080 MAST3O60307 1309 aa21.85■■□□□ 1.09
SREBF1-213ENST00000485080 SPDYE2BA6NHP3 402 aa21.85■■□□□ 1.09
SREBF1-213ENST00000485080 SPDYE6P0CI01 402 aa21.85■■□□□ 1.09
SREBF1-213ENST00000485080 GRIK5Q16478 980 aa21.85■■□□□ 1.09
SREBF1-213ENST00000485080 CFAP100Q494V2 611 aa21.85■■□□□ 1.09
SREBF1-213ENST00000485080 ZGPATQ8N5A5 531 aaKnown RBP21.85■■□□□ 1.09
SREBF1-213ENST00000485080 DBNDD2Q9BQY9 259 aa21.85■■□□□ 1.09
SREBF1-213ENST00000485080 GLIS2Q9BZE0 524 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-213ENST00000485080 DBNLQ9UJU6 430 aaKnown RBP21.85■■□□□ 1.09
SREBF1-213ENST00000485080 ASTN2O75129 1339 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-213ENST00000485080 F8W031 263 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-213ENST00000485080 CCDC158Q5M9N0 1113 aa21.84■■□□□ 1.09
SREBF1-213ENST00000485080 ANGEL2Q5VTE6 544 aaKnown RBP21.84■■□□□ 1.09
SREBF1-213ENST00000485080 KRT26Q7Z3Y9 468 aa21.84■■□□□ 1.09
SREBF1-213ENST00000485080 CREBZFQ9NS37 354 aa21.84■■□□□ 1.09
SREBF1-213ENST00000485080 SULF1Q8IWU6 871 aa21.83■■□□□ 1.09
SREBF1-213ENST00000485080 CLASRPQ8N2M8 674 aaKnown RBP21.83■■□□□ 1.09
SREBF1-213ENST00000485080 HMG20BQ9P0W2 317 aa21.83■■□□□ 1.09
SREBF1-213ENST00000485080 TRPM7Q96QT4 1865 aa21.82■■□□□ 1.08
SREBF1-213ENST00000485080 TMEM88BA6NKF7 163 aa21.82■■□□□ 1.08
SREBF1-213ENST00000485080 TRAF5O00463 557 aa21.82■■□□□ 1.08
SREBF1-213ENST00000485080 IGSF3O75054 1194 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms