RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 FZD1Q9UP38 647 aa22.81■■□□□ 1.24
ATG4B-221ENST00000483778 CCDC85CA6NKD9 419 aa22.8■■□□□ 1.24
ATG4B-221ENST00000483778 FKBP1BP68106 108 aa22.8■■□□□ 1.24
ATG4B-221ENST00000483778 PRKG1Q13976 671 aa22.8■■□□□ 1.24
ATG4B-221ENST00000483778 SSH1Q8WYL5 1049 aa22.8■■□□□ 1.24
ATG4B-221ENST00000483778 UTYO14607 1347 aa22.8■■□□□ 1.24
ATG4B-221ENST00000483778 HDAC9Q9UKV0 1011 aa22.79■■□□□ 1.24
ATG4B-221ENST00000483778 GYG1P46976 350 aa22.78■■□□□ 1.24
ATG4B-221ENST00000483778 PTPN12Q05209 780 aaKnown RBP22.78■■□□□ 1.24
ATG4B-221ENST00000483778 SLFN5Q08AF3 891 aa22.78■■□□□ 1.24
ATG4B-221ENST00000483778 DGKZQ13574 1117 aa22.78■■□□□ 1.24
ATG4B-221ENST00000483778 TTLL12Q14166 644 aaPredicted RBP22.78■■□□□ 1.24
ATG4B-221ENST00000483778 ZNF804AQ7Z570 1209 aa22.78■■□□□ 1.24
ATG4B-221ENST00000483778 ANKRD44Q8N8A2 993 aa22.78■■□□□ 1.24
ATG4B-221ENST00000483778 PRMT6Q96LA8 375 aaPredicted RBP22.78■■□□□ 1.24
ATG4B-221ENST00000483778 BICC1Q9H694 974 aaKnown RBP22.78■■□□□ 1.24
ATG4B-221ENST00000483778 RIPOR2Q9Y4F9 1068 aa22.78■■□□□ 1.24
ATG4B-221ENST00000483778 DLGAP5Q15398 846 aa22.77■■□□□ 1.24
ATG4B-221ENST00000483778 FAM84BQ96KN1 310 aaPredicted RBP22.77■■□□□ 1.24
ATG4B-221ENST00000483778 MMP14P50281 582 aa22.76■■□□□ 1.23
ATG4B-221ENST00000483778 MKRN3Q13064 507 aaKnown RBP22.76■■□□□ 1.23
ATG4B-221ENST00000483778 CFAP100Q494V2 611 aa22.76■■□□□ 1.23
ATG4B-221ENST00000483778 LRRC24Q50LG9 513 aa22.76■■□□□ 1.23
ATG4B-221ENST00000483778 SAGE1Q9NXZ1 904 aa22.76■■□□□ 1.23
ATG4B-221ENST00000483778 CLRN2A0PK11 232 aa22.75■■□□□ 1.23
ATG4B-221ENST00000483778 APOBEC3FQ8IUX4 373 aaKnown RBP22.75■■□□□ 1.23
ATG4B-221ENST00000483778 MTMR14Q8NCE2 650 aa22.75■■□□□ 1.23
ATG4B-221ENST00000483778 TDRD7Q8NHU6 1098 aaKnown RBP22.75■■□□□ 1.23
ATG4B-221ENST00000483778 KLHDC4Q8TBB5 520 aa22.75■■□□□ 1.23
ATG4B-221ENST00000483778 USP44Q9H0E7 712 aa22.75■■□□□ 1.23
ATG4B-221ENST00000483778 DEFB129Q9H1M3 183 aa22.75■■□□□ 1.23
ATG4B-221ENST00000483778 E9PSI1 815 aa22.74■■□□□ 1.23
ATG4B-221ENST00000483778 UBE4AQ14139 1066 aa22.74■■□□□ 1.23
ATG4B-221ENST00000483778 RABL6Q3YEC7 729 aaPredicted RBP22.74■■□□□ 1.23
ATG4B-221ENST00000483778 FKBP1AP62942 108 aaKnown RBP22.73■■□□□ 1.23
ATG4B-221ENST00000483778 GRIK5Q16478 980 aa22.73■■□□□ 1.23
ATG4B-221ENST00000483778 LDLRAD1Q5T700 205 aa22.73■■□□□ 1.23
ATG4B-221ENST00000483778 FAM205AQ6ZU69 1335 aa22.73■■□□□ 1.23
ATG4B-221ENST00000483778 SPDYE2BA6NHP3 402 aa22.72■■□□□ 1.23
ATG4B-221ENST00000483778 TBC1D8O95759 1140 aa22.72■■□□□ 1.23
ATG4B-221ENST00000483778 SPDYE6P0CI01 402 aa22.72■■□□□ 1.23
ATG4B-221ENST00000483778 HIBADHP31937 336 aaKnown RBP22.72■■□□□ 1.23
ATG4B-221ENST00000483778 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.72■■□□□ 1.23
ATG4B-221ENST00000483778 ANGEL1Q9UNK9 670 aaKnown RBP22.72■■□□□ 1.23
ATG4B-221ENST00000483778 IQSEC3Q9UPP2 1182 aaPredicted RBP22.72■■□□□ 1.23
ATG4B-221ENST00000483778 SSC5DA1L4H1 1573 aa22.72■■□□□ 1.23
ATG4B-221ENST00000483778 NF2P35240 595 aa22.71■■□□□ 1.23
ATG4B-221ENST00000483778 TRMT2AQ8IZ69 625 aaKnown RBP22.71■■□□□ 1.23
ATG4B-221ENST00000483778 PTPRCP08575 1304 aa22.71■■□□□ 1.23
ATG4B-221ENST00000483778 TM4SF4P48230 202 aa22.7■■□□□ 1.22
ATG4B-221ENST00000483778 NBPF12Q5TAG4 269 aaPredicted RBP22.7■■□□□ 1.22
ATG4B-221ENST00000483778 ARMC9Q7Z3E5 817 aa22.7■■□□□ 1.22
ATG4B-221ENST00000483778 FBXO33Q7Z6M2 555 aa22.7■■□□□ 1.22
ATG4B-221ENST00000483778 CLMNQ96JQ2 1002 aa22.7■■□□□ 1.22
ATG4B-221ENST00000483778 R3HDMLQ9H3Y0 253 aa22.7■■□□□ 1.22
ATG4B-221ENST00000483778 RBM5P52756 815 aaKnown RBP eCLIP22.69■■□□□ 1.22
ATG4B-221ENST00000483778 MFSD14BQ5SR56 506 aa22.69■■□□□ 1.22
ATG4B-221ENST00000483778 VGLL2Q8N8G2 317 aa22.69■■□□□ 1.22
ATG4B-221ENST00000483778 MROH5Q6ZUA9 1318 aa22.68■■□□□ 1.22
ATG4B-221ENST00000483778 REM2Q8IYK8 340 aaPredicted RBP22.68■■□□□ 1.22
ATG4B-221ENST00000483778 VEZTQ9HBM0 779 aa22.68■■□□□ 1.22
ATG4B-221ENST00000483778 TTF2Q9UNY4 1162 aaKnown RBP22.68■■□□□ 1.22
ATG4B-221ENST00000483778 ARAP2Q8WZ64 1704 aa22.68■■□□□ 1.22
ATG4B-221ENST00000483778 RGS19P49795 217 aa22.67■■□□□ 1.22
ATG4B-221ENST00000483778 METTL24Q5JXM2 366 aa22.67■■□□□ 1.22
ATG4B-221ENST00000483778 SPRYD7Q5W111 196 aa22.67■■□□□ 1.22
ATG4B-221ENST00000483778 CDAN1Q8IWY9 1227 aa22.67■■□□□ 1.22
ATG4B-221ENST00000483778 TDRD3Q9H7E2 651 aaKnown RBP22.67■■□□□ 1.22
ATG4B-221ENST00000483778 RFX5P48382 616 aaPredicted RBP22.66■■□□□ 1.22
ATG4B-221ENST00000483778 BCAMP50895 628 aa22.66■■□□□ 1.22
ATG4B-221ENST00000483778 RASA3Q14644 834 aa22.66■■□□□ 1.22
ATG4B-221ENST00000483778 ZNF70Q9UC06 446 aaPredicted RBP22.66■■□□□ 1.22
ATG4B-221ENST00000483778 USP2O75604 605 aaPredicted RBP22.65■■□□□ 1.22
ATG4B-221ENST00000483778 PDE8BO95263 885 aa22.65■■□□□ 1.22
ATG4B-221ENST00000483778 CHAF1AQ13111 956 aaPredicted RBP22.65■■□□□ 1.22
ATG4B-221ENST00000483778 SLC10A4Q96EP9 437 aa22.65■■□□□ 1.22
ATG4B-221ENST00000483778 COL1A1P02452 1464 aaPredicted RBP22.65■■□□□ 1.22
ATG4B-221ENST00000483778 OTOFQ9HC10 1997 aa22.64■■□□□ 1.21
ATG4B-221ENST00000483778 MAP3K11Q16584 847 aa22.64■■□□□ 1.21
ATG4B-221ENST00000483778 ALDH1L2Q3SY69 923 aa22.64■■□□□ 1.21
ATG4B-221ENST00000483778 DZIP1LQ8IYY4 767 aaKnown RBP22.64■■□□□ 1.21
ATG4B-221ENST00000483778 ZNF296Q8WUU4 475 aaPredicted RBP22.64■■□□□ 1.21
ATG4B-221ENST00000483778 SMC4Q9NTJ3 1288 aa22.64■■□□□ 1.21
ATG4B-221ENST00000483778 MYO1BO43795 1136 aa22.63■■□□□ 1.21
ATG4B-221ENST00000483778 FGFR2P21802 821 aa22.63■■□□□ 1.21
ATG4B-221ENST00000483778 SPDYE2Q495Y8 402 aa22.63■■□□□ 1.21
ATG4B-221ENST00000483778 NOB1Q9ULX3 412 aaKnown RBP22.63■■□□□ 1.21
ATG4B-221ENST00000483778 TNRC18O15417 2968 aaPredicted RBP22.63■■□□□ 1.21
ATG4B-221ENST00000483778 MYH13Q9UKX3 1938 aa22.63■■□□□ 1.21
ATG4B-221ENST00000483778 GJA5P36382 358 aa22.62■■□□□ 1.21
ATG4B-221ENST00000483778 CRKP46108 304 aa22.62■■□□□ 1.21
ATG4B-221ENST00000483778 CTU1Q7Z7A3 348 aaKnown RBP22.62■■□□□ 1.21
ATG4B-221ENST00000483778 TEPSINQ96N21 525 aa22.62■■□□□ 1.21
ATG4B-221ENST00000483778 SERPINA10Q9UK55 444 aa22.62■■□□□ 1.21
ATG4B-221ENST00000483778 PPP2R3BQ9Y5P8 575 aa22.62■■□□□ 1.21
ATG4B-221ENST00000483778 LAMB1P07942 1786 aa22.62■■□□□ 1.21
ATG4B-221ENST00000483778 SUPT20HL1Q3ZLR7 823 aa22.61■■□□□ 1.21
ATG4B-221ENST00000483778 ATG9AQ7Z3C6 839 aa22.61■■□□□ 1.21
ATG4B-221ENST00000483778 VPS37DQ86XT2 251 aa22.61■■□□□ 1.21
ATG4B-221ENST00000483778 WNK4Q96J92 1243 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms