RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 SAMD7Q7Z3H4 446 aa25.81■■□□□ 1.72
SEC13-217ENST00000482647 IQSEC3Q9UPP2 1182 aaPredicted RBP25.81■■□□□ 1.72
SEC13-217ENST00000482647 JAG2Q9Y219 1238 aa25.81■■□□□ 1.72
SEC13-217ENST00000482647 TBC1D10BQ4KMP7 808 aaPredicted RBP25.8■■□□□ 1.72
SEC13-217ENST00000482647 RBM26Q5T8P6 1007 aaKnown RBP25.8■■□□□ 1.72
SEC13-217ENST00000482647 ERC1Q8IUD2 1116 aa25.8■■□□□ 1.72
SEC13-217ENST00000482647 GPR108Q9NPR9 543 aa25.8■■□□□ 1.72
SEC13-217ENST00000482647 SUPT16HQ9Y5B9 1047 aaKnown RBP25.8■■□□□ 1.72
SEC13-217ENST00000482647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.8■■□□□ 1.72
SEC13-217ENST00000482647 ADORA1P30542 326 aa25.79■■□□□ 1.72
SEC13-217ENST00000482647 HIRAP54198 1017 aaPredicted RBP25.79■■□□□ 1.72
SEC13-217ENST00000482647 KIAA0825Q8IV33 1275 aa25.79■■□□□ 1.72
SEC13-217ENST00000482647 TRPM4Q8TD43 1214 aa25.79■■□□□ 1.72
SEC13-217ENST00000482647 ZC3H15Q8WU90 426 aaKnown RBP25.79■■□□□ 1.72
SEC13-217ENST00000482647 XAGE2Q96GT9 111 aa25.79■■□□□ 1.72
SEC13-217ENST00000482647 CRBNQ96SW2 442 aa25.79■■□□□ 1.72
SEC13-217ENST00000482647 HDAC9Q9UKV0 1011 aa25.79■■□□□ 1.72
SEC13-217ENST00000482647 EXOC6BQ9Y2D4 811 aa25.79■■□□□ 1.72
SEC13-217ENST00000482647 CHAF1AQ13111 956 aaPredicted RBP25.78■■□□□ 1.72
SEC13-217ENST00000482647 MFSD14BQ5SR56 506 aa25.78■■□□□ 1.72
SEC13-217ENST00000482647 CERS5Q8N5B7 392 aa25.78■■□□□ 1.72
SEC13-217ENST00000482647 MYOZ2Q9NPC6 264 aa25.78■■□□□ 1.72
SEC13-217ENST00000482647 KIF4BQ2VIQ3 1234 aa25.77■■□□□ 1.72
SEC13-217ENST00000482647 TNNI3KQ59H18 835 aa25.77■■□□□ 1.72
SEC13-217ENST00000482647 GORABQ5T7V8 394 aa25.77■■□□□ 1.72
SEC13-217ENST00000482647 MAP1SQ66K74 1059 aaPredicted RBP25.77■■□□□ 1.72
SEC13-217ENST00000482647 CCDC102BQ68D86 513 aa25.77■■□□□ 1.72
SEC13-217ENST00000482647 TBC1D22AQ8WUA7 517 aa25.77■■□□□ 1.72
SEC13-217ENST00000482647 FPGT-TNNI3KV9GXZ4 949 aa25.77■■□□□ 1.72
SEC13-217ENST00000482647 SEMA3EO15041 775 aa25.76■■□□□ 1.71
SEC13-217ENST00000482647 EGFRP00533 1210 aa25.76■■□□□ 1.71
SEC13-217ENST00000482647 PHKA1P46020 1223 aa25.76■■□□□ 1.71
SEC13-217ENST00000482647 CNTROBQ8N137 903 aa25.76■■□□□ 1.71
SEC13-217ENST00000482647 PGAP2Q9UHJ9 254 aa25.76■■□□□ 1.71
SEC13-217ENST00000482647 ZBTB22O15209 634 aa25.74■■□□□ 1.71
SEC13-217ENST00000482647 RAB11FIP3O75154 756 aa25.74■■□□□ 1.71
SEC13-217ENST00000482647 WDR66Q8TBY9 1149 aa25.74■■□□□ 1.71
SEC13-217ENST00000482647 DENND2AQ9ULE3 1009 aa25.74■■□□□ 1.71
SEC13-217ENST00000482647 PSME4Q14997 1843 aa25.74■■□□□ 1.71
SEC13-217ENST00000482647 F8W031 263 aaPredicted RBP25.73■■□□□ 1.71
SEC13-217ENST00000482647 AAMPQ13685 434 aa25.73■■□□□ 1.71
SEC13-217ENST00000482647 ITGBL1O95965 494 aaPredicted RBP25.72■■□□□ 1.71
SEC13-217ENST00000482647 HSPA6P17066 643 aa25.72■■□□□ 1.71
SEC13-217ENST00000482647 SCARF1Q14162 830 aa25.72■■□□□ 1.71
SEC13-217ENST00000482647 RHPN1Q8TCX5 695 aa25.72■■□□□ 1.71
SEC13-217ENST00000482647 KIF1BPQ96EK5 621 aa25.72■■□□□ 1.71
SEC13-217ENST00000482647 TTF2Q9UNY4 1162 aaKnown RBP25.71■■□□□ 1.71
SEC13-217ENST00000482647 SUGT1Q9Y2Z0 365 aa25.71■■□□□ 1.71
SEC13-217ENST00000482647 PCDHB15Q9Y5E8 787 aa25.71■■□□□ 1.71
SEC13-217ENST00000482647 APBB1O00213 710 aa25.7■■□□□ 1.7
SEC13-217ENST00000482647 CCDC158Q5M9N0 1113 aa25.7■■□□□ 1.7
SEC13-217ENST00000482647 DCPSQ96C86 337 aaKnown RBP25.7■■□□□ 1.7
SEC13-217ENST00000482647 EAF2Q96CJ1 260 aaPredicted RBP25.7■■□□□ 1.7
SEC13-217ENST00000482647 ADAMTSL1Q8N6G6 1762 aa25.69■■□□□ 1.7
SEC13-217ENST00000482647 UQCRFS1P1P0C7P4 283 aa25.69■■□□□ 1.7
SEC13-217ENST00000482647 RASGRF1Q13972 1273 aa25.69■■□□□ 1.7
SEC13-217ENST00000482647 DLGAP5Q15398 846 aa25.69■■□□□ 1.7
SEC13-217ENST00000482647 CDC37L1Q7L3B6 337 aa25.69■■□□□ 1.7
SEC13-217ENST00000482647 DBNDD2Q9BQY9 259 aa25.69■■□□□ 1.7
SEC13-217ENST00000482647 CLASRPQ8N2M8 674 aaKnown RBP25.68■■□□□ 1.7
SEC13-217ENST00000482647 MTMR14Q8NCE2 650 aa25.68■■□□□ 1.7
SEC13-217ENST00000482647 CCDC8Q9H0W5 538 aaPredicted RBP25.68■■□□□ 1.7
SEC13-217ENST00000482647 IL1RAPL2Q9NP60 686 aa25.68■■□□□ 1.7
SEC13-217ENST00000482647 SERPINA10Q9UK55 444 aa25.68■■□□□ 1.7
SEC13-217ENST00000482647 PDS5AQ29RF7 1337 aaKnown RBP25.67■■□□□ 1.7
SEC13-217ENST00000482647 PASKQ96RG2 1323 aa25.67■■□□□ 1.7
SEC13-217ENST00000482647 WNT10BO00744 389 aa25.67■■□□□ 1.7
SEC13-217ENST00000482647 APLP1P51693 650 aa25.67■■□□□ 1.7
SEC13-217ENST00000482647 NBPF9Q3BBW0 867 aa25.67■■□□□ 1.7
SEC13-217ENST00000482647 AACSQ86V21 672 aa25.67■■□□□ 1.7
SEC13-217ENST00000482647 DCTPP1Q9H773 170 aa25.67■■□□□ 1.7
SEC13-217ENST00000482647 DBNLQ9UJU6 430 aaKnown RBP25.67■■□□□ 1.7
SEC13-217ENST00000482647 SALL1Q9NSC2 1324 aa25.66■■□□□ 1.7
SEC13-217ENST00000482647 ARID4AP29374 1257 aaPredicted RBP25.66■■□□□ 1.7
SEC13-217ENST00000482647 RBM5P52756 815 aaKnown RBP eCLIP25.66■■□□□ 1.7
SEC13-217ENST00000482647 CFAP100Q494V2 611 aa25.66■■□□□ 1.7
SEC13-217ENST00000482647 TTC39AQ5SRH9 613 aa25.66■■□□□ 1.7
SEC13-217ENST00000482647 ANGEL2Q5VTE6 544 aaKnown RBP25.66■■□□□ 1.7
SEC13-217ENST00000482647 ZGPATQ8N5A5 531 aaKnown RBP25.66■■□□□ 1.7
SEC13-217ENST00000482647 GLIS2Q9BZE0 524 aaPredicted RBP25.66■■□□□ 1.7
SEC13-217ENST00000482647 GGA3Q9NZ52 723 aa25.66■■□□□ 1.7
SEC13-217ENST00000482647 ASTN2O75129 1339 aaPredicted RBP25.65■■□□□ 1.7
SEC13-217ENST00000482647 ZNF646O15015 1829 aaPredicted RBP25.65■■□□□ 1.7
SEC13-217ENST00000482647 HDLBPQ00341 1268 aaKnown RBP25.65■■□□□ 1.7
SEC13-217ENST00000482647 GRIK5Q16478 980 aa25.65■■□□□ 1.7
SEC13-217ENST00000482647 KRT26Q7Z3Y9 468 aa25.65■■□□□ 1.7
SEC13-217ENST00000482647 USP48Q86UV5 1035 aa25.65■■□□□ 1.7
SEC13-217ENST00000482647 SULF1Q8IWU6 871 aa25.65■■□□□ 1.7
SEC13-217ENST00000482647 SPATA5Q8NB90 893 aa25.65■■□□□ 1.7
SEC13-217ENST00000482647 ZBED3Q96IU2 234 aaPredicted RBP25.65■■□□□ 1.7
SEC13-217ENST00000482647 MRIQ9BWK5 157 aa25.65■■□□□ 1.7
SEC13-217ENST00000482647 HMG20BQ9P0W2 317 aa25.65■■□□□ 1.7
SEC13-217ENST00000482647 COL1A1P02452 1464 aaPredicted RBP25.65■■□□□ 1.7
SEC13-217ENST00000482647 MAST3O60307 1309 aa25.64■■□□□ 1.7
SEC13-217ENST00000482647 EXOC6Q8TAG9 804 aa25.64■■□□□ 1.7
SEC13-217ENST00000482647 ZNF512BQ96KM6 892 aaPredicted RBP25.64■■□□□ 1.7
SEC13-217ENST00000482647 LRRCC1Q9C099 1032 aa25.64■■□□□ 1.7
SEC13-217ENST00000482647 TLR7Q9NYK1 1049 aaKnown RBP25.64■■□□□ 1.7
SEC13-217ENST00000482647 PITPNM2Q9BZ72 1349 aa25.63■■□□□ 1.69
SEC13-217ENST00000482647 SPDYE2BA6NHP3 402 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms