RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 SIRT2Q8IXJ6 389 aa23.33■■□□□ 1.33
AGRN-208ENST00000479707 CRBNQ96SW2 442 aa23.33■■□□□ 1.33
AGRN-208ENST00000479707 AKAP2Q9Y2D5 859 aa23.33■■□□□ 1.33
AGRN-208ENST00000479707 SUPT16HQ9Y5B9 1047 aaKnown RBP23.33■■□□□ 1.33
AGRN-208ENST00000479707 A0A1B0GUL7 405 aa23.32■■□□□ 1.32
AGRN-208ENST00000479707 KIAA0825Q8IV33 1275 aa23.32■■□□□ 1.32
AGRN-208ENST00000479707 CERS5Q8N5B7 392 aa23.32■■□□□ 1.32
AGRN-208ENST00000479707 EXOC6BQ9Y2D4 811 aa23.32■■□□□ 1.32
AGRN-208ENST00000479707 NOP58Q9Y2X3 529 aaKnown RBP23.32■■□□□ 1.32
AGRN-208ENST00000479707 MYO3BQ8WXR4 1341 aa23.32■■□□□ 1.32
AGRN-208ENST00000479707 F8W031 263 aaPredicted RBP23.31■■□□□ 1.32
AGRN-208ENST00000479707 ADAMTSL1Q8N6G6 1762 aa23.31■■□□□ 1.32
AGRN-208ENST00000479707 HMMRO75330 724 aa23.3■■□□□ 1.32
AGRN-208ENST00000479707 KIF4BQ2VIQ3 1234 aa23.3■■□□□ 1.32
AGRN-208ENST00000479707 XAGE2Q96GT9 111 aa23.3■■□□□ 1.32
AGRN-208ENST00000479707 FAM205AQ6ZU69 1335 aa23.3■■□□□ 1.32
AGRN-208ENST00000479707 PHKA1P46020 1223 aa23.29■■□□□ 1.32
AGRN-208ENST00000479707 ZNF280AP59817 542 aaPredicted RBP23.29■■□□□ 1.32
AGRN-208ENST00000479707 CNTROBQ8N137 903 aa23.29■■□□□ 1.32
AGRN-208ENST00000479707 OGFOD1Q8N543 542 aa23.29■■□□□ 1.32
AGRN-208ENST00000479707 MYOZ2Q9NPC6 264 aa23.29■■□□□ 1.32
AGRN-208ENST00000479707 MYH13Q9UKX3 1938 aa23.28■■□□□ 1.32
AGRN-208ENST00000479707 ZNF609O15014 1411 aa23.28■■□□□ 1.32
AGRN-208ENST00000479707 APBB1O00213 710 aa23.28■■□□□ 1.32
AGRN-208ENST00000479707 MFSD14BQ5SR56 506 aa23.28■■□□□ 1.32
AGRN-208ENST00000479707 CCDC102BQ68D86 513 aa23.28■■□□□ 1.32
AGRN-208ENST00000479707 BCL11AQ9H165 835 aa23.27■■□□□ 1.32
AGRN-208ENST00000479707 GNL3LQ9NVN8 582 aaKnown RBP23.27■■□□□ 1.32
AGRN-208ENST00000479707 HDAC9Q9UKV0 1011 aa23.27■■□□□ 1.32
AGRN-208ENST00000479707 ARAP2Q8WZ64 1704 aa23.27■■□□□ 1.32
AGRN-208ENST00000479707 FKBP1AP62942 108 aaKnown RBP23.26■■□□□ 1.31
AGRN-208ENST00000479707 TNNI3KQ59H18 835 aa23.26■■□□□ 1.31
AGRN-208ENST00000479707 GORABQ5T7V8 394 aa23.26■■□□□ 1.31
AGRN-208ENST00000479707 FPGT-TNNI3KV9GXZ4 949 aa23.26■■□□□ 1.31
AGRN-208ENST00000479707 POLR2AP24928 1970 aaKnown RBP23.25■■□□□ 1.31
AGRN-208ENST00000479707 HSPA6P17066 643 aa23.25■■□□□ 1.31
AGRN-208ENST00000479707 SCARF1Q14162 830 aa23.25■■□□□ 1.31
AGRN-208ENST00000479707 ASTN2O75129 1339 aaPredicted RBP23.25■■□□□ 1.31
AGRN-208ENST00000479707 ITGBL1O95965 494 aaPredicted RBP23.24■■□□□ 1.31
AGRN-208ENST00000479707 GRIK5Q16478 980 aa23.24■■□□□ 1.31
AGRN-208ENST00000479707 HSP90AB4PQ58FF6 505 aa23.24■■□□□ 1.31
AGRN-208ENST00000479707 ERC1Q8IUD2 1116 aa23.24■■□□□ 1.31
AGRN-208ENST00000479707 GPR108Q9NPR9 543 aa23.24■■□□□ 1.31
AGRN-208ENST00000479707 FMR1Q06787 632 aaKnown RBP eCLIP23.23■■□□□ 1.315e-7■□□□□ 11.2
AGRN-208ENST00000479707 NBPF9Q3BBW0 867 aa23.23■■□□□ 1.31
AGRN-208ENST00000479707 RHPN1Q8TCX5 695 aa23.23■■□□□ 1.31
AGRN-208ENST00000479707 ZC3H15Q8WU90 426 aaKnown RBP23.23■■□□□ 1.31
AGRN-208ENST00000479707 TBC1D22AQ8WUA7 517 aa23.23■■□□□ 1.31
AGRN-208ENST00000479707 DBNDD2Q9BQY9 259 aa23.23■■□□□ 1.31
AGRN-208ENST00000479707 GLIS2Q9BZE0 524 aaPredicted RBP23.23■■□□□ 1.31
AGRN-208ENST00000479707 CCDC8Q9H0W5 538 aaPredicted RBP23.23■■□□□ 1.31
AGRN-208ENST00000479707 IL1RAPL2Q9NP60 686 aa23.23■■□□□ 1.31
AGRN-208ENST00000479707 PGAP2Q9UHJ9 254 aa23.23■■□□□ 1.31
AGRN-208ENST00000479707 TTF2Q9UNY4 1162 aaKnown RBP23.23■■□□□ 1.31
AGRN-208ENST00000479707 PCDHB15Q9Y5E8 787 aa23.23■■□□□ 1.31
AGRN-208ENST00000479707 DENND2AQ9ULE3 1009 aa23.22■■□□□ 1.31
AGRN-208ENST00000479707 PCDHAC2Q9Y5I4 1007 aa23.22■■□□□ 1.31
AGRN-208ENST00000479707 COL1A1P02452 1464 aaPredicted RBP23.22■■□□□ 1.31
AGRN-208ENST00000479707 TRAF5O00463 557 aa23.21■■□□□ 1.31
AGRN-208ENST00000479707 RBM5P52756 815 aaKnown RBP eCLIP23.21■■□□□ 1.311e-6■□□□□ 8
AGRN-208ENST00000479707 HTRA3P83110 453 aa23.21■■□□□ 1.31
AGRN-208ENST00000479707 USP48Q86UV5 1035 aa23.21■■□□□ 1.31
AGRN-208ENST00000479707 DCPSQ96C86 337 aaKnown RBP23.21■■□□□ 1.31
AGRN-208ENST00000479707 EAF2Q96CJ1 260 aaPredicted RBP23.21■■□□□ 1.31
AGRN-208ENST00000479707 GGA3Q9NZ52 723 aa23.21■■□□□ 1.31
AGRN-208ENST00000479707 WNT10BO00744 389 aa23.2■■□□□ 1.3
AGRN-208ENST00000479707 APLP1P51693 650 aa23.2■■□□□ 1.3
AGRN-208ENST00000479707 RASGRF1Q13972 1273 aa23.2■■□□□ 1.3
AGRN-208ENST00000479707 DLGAP5Q15398 846 aa23.2■■□□□ 1.3
AGRN-208ENST00000479707 CFAP100Q494V2 611 aa23.2■■□□□ 1.3
AGRN-208ENST00000479707 ANGEL2Q5VTE6 544 aaKnown RBP23.2■■□□□ 1.3
AGRN-208ENST00000479707 DLK2Q6UY11 383 aa23.2■■□□□ 1.3
AGRN-208ENST00000479707 WDR66Q8TBY9 1149 aa23.2■■□□□ 1.3
AGRN-208ENST00000479707 TLR7Q9NYK1 1049 aaKnown RBP23.2■■□□□ 1.3
AGRN-208ENST00000479707 SCAF8Q9UPN6 1271 aaKnown RBP23.2■■□□□ 1.3
AGRN-208ENST00000479707 PASKQ96RG2 1323 aa23.19■■□□□ 1.3
AGRN-208ENST00000479707 SEMA3EO15041 775 aa23.19■■□□□ 1.3
AGRN-208ENST00000479707 MMP14P50281 582 aa23.19■■□□□ 1.3
AGRN-208ENST00000479707 IRX6P78412 446 aaPredicted RBP23.19■■□□□ 1.3
AGRN-208ENST00000479707 TTC39AQ5SRH9 613 aa23.19■■□□□ 1.3
AGRN-208ENST00000479707 CDC37L1Q7L3B6 337 aa23.19■■□□□ 1.3
AGRN-208ENST00000479707 AACSQ86V21 672 aa23.19■■□□□ 1.3
AGRN-208ENST00000479707 EXOC6Q8TAG9 804 aa23.19■■□□□ 1.3
AGRN-208ENST00000479707 KIF1BPQ96EK5 621 aa23.19■■□□□ 1.3
AGRN-208ENST00000479707 RAB11FIP3O75154 756 aa23.18■■□□□ 1.3
AGRN-208ENST00000479707 CCDC158Q5M9N0 1113 aa23.18■■□□□ 1.3
AGRN-208ENST00000479707 KRT26Q7Z3Y9 468 aa23.18■■□□□ 1.3
AGRN-208ENST00000479707 DBNLQ9UJU6 430 aaKnown RBP23.18■■□□□ 1.3
AGRN-208ENST00000479707 ADM5C9JUS6 153 aa23.17■■□□□ 1.3
AGRN-208ENST00000479707 PI16Q6UXB8 463 aa23.17■■□□□ 1.3
AGRN-208ENST00000479707 CLASRPQ8N2M8 674 aaKnown RBP23.16■■□□□ 1.3
AGRN-208ENST00000479707 ZBED3Q96IU2 234 aaPredicted RBP23.16■■□□□ 1.3
AGRN-208ENST00000479707 PRMT6Q96LA8 375 aaPredicted RBP23.16■■□□□ 1.3
AGRN-208ENST00000479707 SNRKQ9NRH2 765 aa23.16■■□□□ 1.3
AGRN-208ENST00000479707 HMG20BQ9P0W2 317 aa23.16■■□□□ 1.3
AGRN-208ENST00000479707 SMARCA5O60264 1052 aaPredicted RBP23.15■■□□□ 1.3
AGRN-208ENST00000479707 UQCRFS1P1P0C7P4 283 aa23.15■■□□□ 1.3
AGRN-208ENST00000479707 ARID4AP29374 1257 aaPredicted RBP23.15■■□□□ 1.3
AGRN-208ENST00000479707 PRDX5P30044 214 aa23.15■■□□□ 1.3
AGRN-208ENST00000479707 MCAMP43121 646 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms