RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 ADH6P28332 368 aa9.1□□□□□ -0.95
SSR3-207ENST00000478842 SIK1P57059 783 aa9.1□□□□□ -0.95
SSR3-207ENST00000478842 GRM2Q14416 872 aa9.1□□□□□ -0.95
SSR3-207ENST00000478842 PEAR1Q5VY43 1037 aaPredicted RBP9.1□□□□□ -0.95
SSR3-207ENST00000478842 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
SSR3-207ENST00000478842 NSUN5Q96P11 429 aaKnown RBP9.1□□□□□ -0.95
SSR3-207ENST00000478842 UBE2OQ9C0C9 1292 aaKnown RBP9.1□□□□□ -0.95
SSR3-207ENST00000478842 SAMD9Q5K651 1589 aa9.1□□□□□ -0.95
SSR3-207ENST00000478842 STRCQ7RTU9 1775 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 SIGLEC1Q9BZZ2 1709 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 YEATS2Q9ULM3 1422 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 C2CD2LO14523 706 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 GSTT1P30711 240 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 PRPF40BQ6NWY9 871 aaKnown RBP9.09□□□□□ -0.95
SSR3-207ENST00000478842 NXPE4Q6UWF7 544 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 CEP120Q8N960 986 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 SLC16A10Q8TF71 515 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 ZFYVE1Q9HBF4 777 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 DNAJB12Q9NXW2 375 aaKnown RBP9.09□□□□□ -0.95
SSR3-207ENST00000478842 ZFYVE16Q7Z3T8 1539 aa9.09□□□□□ -0.95
SSR3-207ENST00000478842 SETD1BQ9UPS6 1966 aaKnown RBP9.08□□□□□ -0.96
SSR3-207ENST00000478842 SPATA31D1Q6ZQQ2 1576 aa9.08□□□□□ -0.96
SSR3-207ENST00000478842 XRCC5P13010 732 aaKnown RBP9.08□□□□□ -0.96
SSR3-207ENST00000478842 GAS6Q14393 721 aa9.08□□□□□ -0.96
SSR3-207ENST00000478842 COL13A1Q5TAT6 717 aaPredicted RBP9.08□□□□□ -0.96
SSR3-207ENST00000478842 ZNF787Q6DD87 383 aa9.08□□□□□ -0.96
SSR3-207ENST00000478842 OSMRQ99650 979 aa9.08□□□□□ -0.96
SSR3-207ENST00000478842 IGFLR1Q9H665 355 aa9.08□□□□□ -0.96
SSR3-207ENST00000478842 LATS2Q9NRM7 1088 aa9.08□□□□□ -0.96
SSR3-207ENST00000478842 PLEKHD1A6NEE1 506 aa9.07□□□□□ -0.96
SSR3-207ENST00000478842 GHRHP01286 108 aa9.07□□□□□ -0.96
SSR3-207ENST00000478842 USP17L7P0C7H9 530 aa9.07□□□□□ -0.96
SSR3-207ENST00000478842 PCBP4P57723 403 aaKnown RBP9.07□□□□□ -0.96
SSR3-207ENST00000478842 ZKSCAN3Q9BRR0 538 aa9.07□□□□□ -0.96
SSR3-207ENST00000478842 LIN7BQ9HAP6 207 aa9.07□□□□□ -0.96
SSR3-207ENST00000478842 DZANK1Q9NVP4 752 aa9.07□□□□□ -0.96
SSR3-207ENST00000478842 ARHGEF12Q9NZN5 1544 aa9.06□□□□□ -0.96
SSR3-207ENST00000478842 ADARB2-AS1A8MUL3 147 aa9.06□□□□□ -0.96
SSR3-207ENST00000478842 TERTO14746 1132 aaKnown RBP9.06□□□□□ -0.96
SSR3-207ENST00000478842 CTSHP09668 335 aa9.06□□□□□ -0.96
SSR3-207ENST00000478842 ST13P50502 369 aaKnown RBP9.06□□□□□ -0.96
SSR3-207ENST00000478842 TBC1D8BQ0IIM8 1120 aa9.06□□□□□ -0.96
SSR3-207ENST00000478842 LDLRAD1Q5T700 205 aa9.06□□□□□ -0.96
SSR3-207ENST00000478842 CCNJLQ8IV13 435 aa9.06□□□□□ -0.96
SSR3-207ENST00000478842 GDF2Q9UK05 429 aaPredicted RBP9.06□□□□□ -0.96
SSR3-207ENST00000478842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.06□□□□□ -0.96
SSR3-207ENST00000478842 NUP153P49790 1475 aaKnown RBP9.06□□□□□ -0.96
SSR3-207ENST00000478842 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 IQSEC2Q5JU85 1478 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 USP31Q70CQ4 1352 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 ZBTB42B2RXF5 422 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 ZNF76P36508 570 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 TAF1CQ15572 869 aaPredicted RBP9.05□□□□□ -0.96
SSR3-207ENST00000478842 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
SSR3-207ENST00000478842 TMEM102Q8N9M5 508 aaPredicted RBP9.05□□□□□ -0.96
SSR3-207ENST00000478842 IRF7Q92985 503 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 RNF34Q969K3 372 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 PBX4Q9BYU1 374 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 BHLHE41Q9C0J9 482 aaPredicted RBP9.05□□□□□ -0.96
SSR3-207ENST00000478842 SLC6A14Q9UN76 642 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.05□□□□□ -0.96
SSR3-207ENST00000478842 PTPRTO14522 1441 aa9.05□□□□□ -0.96
SSR3-207ENST00000478842 ATP10AO60312 1499 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 TMEM238LA0A1B0GVL6 79 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 SMNDC1O75940 238 aaKnown RBP eCLIP9.04□□□□□ -0.96
SSR3-207ENST00000478842 EIF2AK2P19525 551 aaKnown RBP9.04□□□□□ -0.96
SSR3-207ENST00000478842 ADH7P40394 386 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 MLLT1Q03111 559 aaPredicted RBP9.04□□□□□ -0.96
SSR3-207ENST00000478842 SRSF11Q05519 484 aaKnown RBP9.04□□□□□ -0.96
SSR3-207ENST00000478842 FAM35AQ86V20 835 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 GLIS3Q8NEA6 775 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 TCF12Q99081 682 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 PPM1HQ9ULR3 514 aa9.04□□□□□ -0.96
SSR3-207ENST00000478842 ELOA3CA0A087WX78 387 aaPredicted RBP9.03□□□□□ -0.96
SSR3-207ENST00000478842 ELOA3DA6NLF2 546 aaPredicted RBP9.03□□□□□ -0.96
SSR3-207ENST00000478842 J3QW42 95 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 PDE2AO00408 941 aaPredicted RBP9.03□□□□□ -0.96
SSR3-207ENST00000478842 ALAS2P22557 587 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 FANCCQ00597 558 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
SSR3-207ENST00000478842 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
SSR3-207ENST00000478842 ELOA3BQ3SY89 546 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 HFE2Q6ZVN8 426 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 ELOA3Q8NG57 546 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 ANKRD24Q8TF21 1146 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 CNTNAP3BQ96NU0 1288 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 COL25A1Q9BXS0 654 aaPredicted RBP9.03□□□□□ -0.96
SSR3-207ENST00000478842 CNTNAP3Q9BZ76 1288 aa9.03□□□□□ -0.96
SSR3-207ENST00000478842 NEURL1BA8MQ27 555 aa9.02□□□□□ -0.97
SSR3-207ENST00000478842 NFKBIEO00221 500 aa9.02□□□□□ -0.97
SSR3-207ENST00000478842 FCGRTP55899 365 aa9.02□□□□□ -0.97
SSR3-207ENST00000478842 HDLBPQ00341 1268 aaKnown RBP9.02□□□□□ -0.97
SSR3-207ENST00000478842 MLECQ14165 292 aa9.02□□□□□ -0.97
SSR3-207ENST00000478842 ELMSAN1Q6PJG2 1045 aa9.02□□□□□ -0.97
SSR3-207ENST00000478842 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
SSR3-207ENST00000478842 SLCO4C1Q6ZQN7 724 aa9.02□□□□□ -0.97
SSR3-207ENST00000478842 NXPE3Q969Y0 559 aa9.02□□□□□ -0.97
SSR3-207ENST00000478842 MDFIQ99750 246 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms