RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SEC31BQ9NQW1 1179 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 PGAP2Q9UHJ9 254 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 CNOT7Q9UIV1 285 aaKnown RBP7.16□□□□□ -1.26
TRA2B-211ENST00000477939 NSFL1CQ9UNZ2 370 aaKnown RBP7.16□□□□□ -1.26
TRA2B-211ENST00000477939 CEP83Q9Y592 693 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 RIMBP2O15034 1052 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 ECE2O60344 883 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 ECE1P42892 770 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 GNAI1P63096 354 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 CCDC184Q52MB2 194 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 WDR78Q5VTH9 848 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 DLK2Q6UY11 383 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 SAMD7Q7Z3H4 446 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 TSPYL6Q8N831 410 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 TBC1D16Q8TBP0 767 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 ZC3H15Q8WU90 426 aaKnown RBP7.15□□□□□ -1.26
TRA2B-211ENST00000477939 SNRNP27Q8WVK2 155 aaKnown RBP7.15□□□□□ -1.26
TRA2B-211ENST00000477939 DPF2Q92785 391 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 MYCBPQ99417 103 aaPredicted RBP7.15□□□□□ -1.26
TRA2B-211ENST00000477939 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.26
TRA2B-211ENST00000477939 ZHX1Q9UKY1 873 aaPredicted RBP7.15□□□□□ -1.26
TRA2B-211ENST00000477939 ZNF609O15014 1411 aa7.15□□□□□ -1.27
TRA2B-211ENST00000477939 C6orf229H3BNL8 230 aa7.14□□□□□ -1.27
TRA2B-211ENST00000477939 AOC2O75106 756 aa7.14□□□□□ -1.27
TRA2B-211ENST00000477939 PCCAP05165 728 aaPredicted RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 RPS8P62241 208 aaKnown RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 MAPK8IP2Q13387 824 aaPredicted RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 ZRSR2Q15696 482 aaKnown RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 DOK7Q18PE1 504 aa7.14□□□□□ -1.27
TRA2B-211ENST00000477939 TBC1D10BQ4KMP7 808 aaPredicted RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 CCDC191Q8NCU4 936 aa7.14□□□□□ -1.27
TRA2B-211ENST00000477939 JARID2Q92833 1246 aaPredicted RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 TSR2Q969E8 191 aaKnown RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 HHIPL1Q96JK4 782 aa7.14□□□□□ -1.27
TRA2B-211ENST00000477939 CCDC85AQ96PX6 553 aaPredicted RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 METTL22Q9BUU2 404 aaPredicted RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 ZNF408Q9H9D4 720 aa7.14□□□□□ -1.27
TRA2B-211ENST00000477939 CWC25Q9NXE8 425 aaPredicted RBP7.14□□□□□ -1.27
TRA2B-211ENST00000477939 TSKSQ9UJT2 592 aa7.14□□□□□ -1.27
TRA2B-211ENST00000477939 CASP8AP2Q9UKL3 1982 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 A0A1B0GUL6 1792 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 ASTN2O75129 1339 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-211ENST00000477939 ESPNB1AK53 854 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 ADM5C9JUS6 153 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 H7C1D1 291 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 PDE8AO60658 829 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 UFL1O94874 794 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 IGKV5-2P06315 115 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 LIG1P18858 919 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 RPS12P25398 132 aaKnown RBP7.13□□□□□ -1.27
TRA2B-211ENST00000477939 CTSWP56202 376 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 KIF4BQ2VIQ3 1234 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 CCDC152Q4G0S7 254 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-211ENST00000477939 CCDC30Q5VVM6 783 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 CDC37L1Q7L3B6 337 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 FOXD4L4Q8WXT5 416 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-211ENST00000477939 ITFG2Q969R8 447 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 EYA3Q99504 573 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 MAP3K2Q9Y2U5 619 aa7.13□□□□□ -1.27
TRA2B-211ENST00000477939 CENPFP49454 3210 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 BRCA2P51587 3418 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 XDHP47989 1333 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 CACNA1FO60840 1977 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 PI4KAP2A4QPH2 592 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 WTIPA6NIX2 430 aaPredicted RBP7.12□□□□□ -1.27
TRA2B-211ENST00000477939 DDX58O95786 925 aaKnown RBP7.12□□□□□ -1.27
TRA2B-211ENST00000477939 VIL1P09327 827 aaKnown RBP7.12□□□□□ -1.27
TRA2B-211ENST00000477939 CCDC172P0C7W6 258 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 MAP2K2P36507 400 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 MFAP1P55081 439 aaKnown RBP7.12□□□□□ -1.27
TRA2B-211ENST00000477939 BRPF1P55201 1214 aaPredicted RBP7.12□□□□□ -1.27
TRA2B-211ENST00000477939 ARMCX6Q7L4S7 300 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 KRT26Q7Z3Y9 468 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 USP48Q86UV5 1035 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 PI4KAP1Q8N8J0 262 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 SGSM3Q96HU1 749 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 ABHD8Q96I13 439 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 ZIC5Q96T25 663 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 BEGAINQ9BUH8 593 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 BRMS1Q9HCU9 246 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 RRAGDQ9NQL2 400 aaPredicted RBP7.12□□□□□ -1.27
TRA2B-211ENST00000477939 PPP4R2Q9NY27 417 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 GGA3Q9NZ52 723 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 ANKIB1Q9P2G1 1089 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 ANAPC4Q9UJX5 808 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 GGA1Q9UJY5 639 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 ISY1Q9ULR0 285 aaKnown RBP7.12□□□□□ -1.27
TRA2B-211ENST00000477939 HTTP42858 3142 aa7.12□□□□□ -1.27
TRA2B-211ENST00000477939 MED23Q9ULK4 1368 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 PAPPA2Q9BXP8 1791 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 NEURL1BA8MQ27 555 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 FAM155AB1AL88 458 aaPredicted RBP7.11□□□□□ -1.27
TRA2B-211ENST00000477939 HUNKP57058 714 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 ZNF280AP59817 542 aaPredicted RBP7.11□□□□□ -1.27
TRA2B-211ENST00000477939 CWF19L2Q2TBE0 894 aaKnown RBP7.11□□□□□ -1.27
TRA2B-211ENST00000477939 RBM26Q5T8P6 1007 aaKnown RBP7.11□□□□□ -1.27
TRA2B-211ENST00000477939 RSBN1LQ6PCB5 846 aaPredicted RBP7.11□□□□□ -1.27
TRA2B-211ENST00000477939 KSR2Q6VAB6 950 aa7.11□□□□□ -1.27
TRA2B-211ENST00000477939 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms