RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.03■■□□□ 1.76
PDLIM1-202ENST00000477757 OTOFQ9HC10 1997 aa26.02■■□□□ 1.76
PDLIM1-202ENST00000477757 GJA5P36382 358 aa26.02■■□□□ 1.76
PDLIM1-202ENST00000477757 CWF19L2Q2TBE0 894 aaKnown RBP26.02■■□□□ 1.76
PDLIM1-202ENST00000477757 SUPT20HL1Q3ZLR7 823 aa26.02■■□□□ 1.76
PDLIM1-202ENST00000477757 UBE3BQ7Z3V4 1068 aa26.02■■□□□ 1.76
PDLIM1-202ENST00000477757 ITGA6P23229 1130 aa26.01■■□□□ 1.75
PDLIM1-202ENST00000477757 SP3Q02447 781 aa26.01■■□□□ 1.75
PDLIM1-202ENST00000477757 PLA2G12BQ9BX93 195 aa26.01■■□□□ 1.75
PDLIM1-202ENST00000477757 IRS2Q9Y4H2 1338 aa26.01■■□□□ 1.75
PDLIM1-202ENST00000477757 PCDHAC2Q9Y5I4 1007 aa26.01■■□□□ 1.75
PDLIM1-202ENST00000477757 A0A1B0GUL6 1792 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 TESPA1A2RU30 521 aaPredicted RBP26■■□□□ 1.75
PDLIM1-202ENST00000477757 SPDYE2BA6NHP3 402 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 H7C1W4 665 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 MYO1BO43795 1136 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 SPDYE6P0CI01 402 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 KCNJ4P48050 445 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 IREB2P48200 963 aaKnown RBP26■■□□□ 1.75
PDLIM1-202ENST00000477757 CAP1Q01518 475 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 MPHOSPH8Q99549 860 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 PTPN18Q99952 460 aa26■■□□□ 1.75
PDLIM1-202ENST00000477757 CLRN2A0PK11 232 aa25.99■■□□□ 1.75
PDLIM1-202ENST00000477757 ZNF333Q96JL9 665 aa25.99■■□□□ 1.75
PDLIM1-202ENST00000477757 CHRNDQ07001 517 aa25.98■■□□□ 1.75
PDLIM1-202ENST00000477757 CFAP100Q494V2 611 aa25.98■■□□□ 1.75
PDLIM1-202ENST00000477757 NBPF12Q5TAG4 269 aaPredicted RBP25.98■■□□□ 1.75
PDLIM1-202ENST00000477757 C15orf52Q6ZUT6 534 aaKnown RBP25.98■■□□□ 1.75
PDLIM1-202ENST00000477757 ANKRD13AQ8IZ07 590 aa25.98■■□□□ 1.75
PDLIM1-202ENST00000477757 TSPYL6Q8N831 410 aa25.97■■□□□ 1.75
PDLIM1-202ENST00000477757 TMEM106CQ9BVX2 250 aa25.97■■□□□ 1.75
PDLIM1-202ENST00000477757 VEZTQ9HBM0 779 aa25.97■■□□□ 1.75
PDLIM1-202ENST00000477757 AOX1Q06278 1338 aa25.96■■□□□ 1.75
PDLIM1-202ENST00000477757 APAF1O14727 1248 aa25.96■■□□□ 1.75
PDLIM1-202ENST00000477757 USP2O75604 605 aaPredicted RBP25.96■■□□□ 1.75
PDLIM1-202ENST00000477757 FKBP1AP62942 108 aaKnown RBP25.96■■□□□ 1.75
PDLIM1-202ENST00000477757 CEP290O15078 2479 aa25.96■■□□□ 1.75
PDLIM1-202ENST00000477757 F8W031 263 aaPredicted RBP25.95■■□□□ 1.74
PDLIM1-202ENST00000477757 CSF1RP07333 972 aa25.95■■□□□ 1.74
PDLIM1-202ENST00000477757 CASP7P55210 303 aa25.95■■□□□ 1.74
PDLIM1-202ENST00000477757 GCKRQ14397 625 aa25.95■■□□□ 1.74
PDLIM1-202ENST00000477757 PRMT6Q96LA8 375 aaPredicted RBP25.95■■□□□ 1.74
PDLIM1-202ENST00000477757 STK31Q9BXU1 1019 aa25.95■■□□□ 1.74
PDLIM1-202ENST00000477757 IL1R1P14778 569 aa25.94■■□□□ 1.74
PDLIM1-202ENST00000477757 RASA3Q14644 834 aa25.94■■□□□ 1.74
PDLIM1-202ENST00000477757 OPTNQ96CV9 577 aa25.94■■□□□ 1.74
PDLIM1-202ENST00000477757 COLQQ9Y215 455 aaPredicted RBP25.94■■□□□ 1.74
PDLIM1-202ENST00000477757 SNAP23O00161 211 aa25.93■■□□□ 1.74
PDLIM1-202ENST00000477757 SLC9C1Q4G0N8 1177 aa25.93■■□□□ 1.74
PDLIM1-202ENST00000477757 ZNF804AQ7Z570 1209 aa25.93■■□□□ 1.74
PDLIM1-202ENST00000477757 MS4A4AQ96JQ5 239 aa25.93■■□□□ 1.74
PDLIM1-202ENST00000477757 ARHGEF6Q15052 776 aa25.92■■□□□ 1.74
PDLIM1-202ENST00000477757 ELP3Q9H9T3 547 aa25.92■■□□□ 1.74
PDLIM1-202ENST00000477757 PTCH2Q9Y6C5 1203 aa25.92■■□□□ 1.74
PDLIM1-202ENST00000477757 TRIOBPQ9H2D6 2365 aa25.92■■□□□ 1.74
PDLIM1-202ENST00000477757 TNFAIP1Q13829 316 aa25.91■■□□□ 1.74
PDLIM1-202ENST00000477757 NBPF11Q86T75 865 aa25.91■■□□□ 1.74
PDLIM1-202ENST00000477757 ANKRD18BA2A2Z9 1011 aa25.9■■□□□ 1.74
PDLIM1-202ENST00000477757 TAF5LO75529 589 aa25.9■■□□□ 1.74
PDLIM1-202ENST00000477757 G2E3Q7L622 706 aa25.9■■□□□ 1.74
PDLIM1-202ENST00000477757 BRI3BPQ8WY22 251 aa25.9■■□□□ 1.74
PDLIM1-202ENST00000477757 MYH16Q9H6N6 1097 aa25.9■■□□□ 1.74
PDLIM1-202ENST00000477757 SZT2Q5T011 3432 aa25.89■■□□□ 1.74
PDLIM1-202ENST00000477757 TAF1CQ15572 869 aaPredicted RBP25.89■■□□□ 1.74
PDLIM1-202ENST00000477757 SPDYE2Q495Y8 402 aa25.89■■□□□ 1.74
PDLIM1-202ENST00000477757 ARAP2Q8WZ64 1704 aa25.88■■□□□ 1.73
PDLIM1-202ENST00000477757 RBM5P52756 815 aaKnown RBP eCLIP25.88■■□□□ 1.73
PDLIM1-202ENST00000477757 HELBQ8NG08 1087 aaPredicted RBP25.88■■□□□ 1.73
PDLIM1-202ENST00000477757 ZFYVE28Q9HCC9 887 aa25.88■■□□□ 1.73
PDLIM1-202ENST00000477757 RANBP2P49792 3224 aaKnown RBP25.87■■□□□ 1.73
PDLIM1-202ENST00000477757 SLC4A8Q2Y0W8 1093 aa25.87■■□□□ 1.73
PDLIM1-202ENST00000477757 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.87■■□□□ 1.73
PDLIM1-202ENST00000477757 TSR2Q969E8 191 aaKnown RBP25.87■■□□□ 1.73
PDLIM1-202ENST00000477757 JAG2Q9Y219 1238 aa25.87■■□□□ 1.73
PDLIM1-202ENST00000477757 CCL15-CCL14A0A0B4J2E2 113 aa25.86■■□□□ 1.73
PDLIM1-202ENST00000477757 GTF2A2P52657 109 aa25.86■■□□□ 1.73
PDLIM1-202ENST00000477757 CCL15Q16663 113 aa25.86■■□□□ 1.73
PDLIM1-202ENST00000477757 CNKSR2Q8WXI2 1034 aa25.86■■□□□ 1.73
PDLIM1-202ENST00000477757 TEPSINQ96N21 525 aa25.86■■□□□ 1.73
PDLIM1-202ENST00000477757 ZNF70Q9UC06 446 aaPredicted RBP25.86■■□□□ 1.73
PDLIM1-202ENST00000477757 H0YGN5 161 aa25.85■■□□□ 1.73
PDLIM1-202ENST00000477757 SLC4A2P04920 1241 aa25.85■■□□□ 1.73
PDLIM1-202ENST00000477757 VGLL4Q14135 290 aa25.85■■□□□ 1.73
PDLIM1-202ENST00000477757 CDAN1Q8IWY9 1227 aa25.85■■□□□ 1.73
PDLIM1-202ENST00000477757 FAM43AQ8N2R8 423 aa25.85■■□□□ 1.73
PDLIM1-202ENST00000477757 LINS1Q8NG48 757 aa25.85■■□□□ 1.73
PDLIM1-202ENST00000477757 FAM205AQ6ZU69 1335 aa25.85■■□□□ 1.73
PDLIM1-202ENST00000477757 FLIIQ13045 1269 aa25.84■■□□□ 1.73
PDLIM1-202ENST00000477757 DDX10Q13206 875 aaKnown RBP25.84■■□□□ 1.73
PDLIM1-202ENST00000477757 IFIT5Q13325 482 aaKnown RBP25.84■■□□□ 1.73
PDLIM1-202ENST00000477757 DNAAF4Q8WXU2 420 aa25.84■■□□□ 1.73
PDLIM1-202ENST00000477757 OTUD5Q96G74 571 aa25.84■■□□□ 1.73
PDLIM1-202ENST00000477757 SERPINA10Q9UK55 444 aa25.84■■□□□ 1.73
PDLIM1-202ENST00000477757 ZSWIM8A7E2V4 1837 aa25.84■■□□□ 1.73
PDLIM1-202ENST00000477757 TWISTNBQ3B726 338 aaPredicted RBP25.83■■□□□ 1.73
PDLIM1-202ENST00000477757 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.83■■□□□ 1.73
PDLIM1-202ENST00000477757 TDRD3Q9H7E2 651 aaKnown RBP25.82■■□□□ 1.72
PDLIM1-202ENST00000477757 CSADQ9Y600 493 aa25.82■■□□□ 1.72
PDLIM1-202ENST00000477757 MAP3K9P80192 1104 aa25.81■■□□□ 1.72
PDLIM1-202ENST00000477757 FOXO4P98177 505 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms