RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 SLCO4C1Q6ZQN7 724 aa9.44□□□□□ -0.9
VPS50-212ENST00000476413 PHC3Q8NDX5 983 aa9.44□□□□□ -0.9
VPS50-212ENST00000476413 TMEM74Q96NL1 305 aa9.44□□□□□ -0.9
VPS50-212ENST00000476413 CLEC4MQ9H2X3 399 aaPredicted RBP9.44□□□□□ -0.9
VPS50-212ENST00000476413 INPP5FQ9Y2H2 1132 aa9.44□□□□□ -0.9
VPS50-212ENST00000476413 TERTO14746 1132 aaKnown RBP9.43□□□□□ -0.9
VPS50-212ENST00000476413 GARTP22102 1010 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 LIG3P49916 1009 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 NFX1Q12986 1120 aaKnown RBP9.43□□□□□ -0.9
VPS50-212ENST00000476413 PAK2Q13177 524 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 SF3A1Q15459 793 aaKnown RBP9.43□□□□□ -0.9
VPS50-212ENST00000476413 GRIK5Q16478 980 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 MAP3K11Q16584 847 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 ZNF423Q2M1K9 1284 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 PSAPL1Q6NUJ1 521 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 ELMSAN1Q6PJG2 1045 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 C1orf229Q6ZS94 237 aaPredicted RBP9.43□□□□□ -0.9
VPS50-212ENST00000476413 TTC9Q92623 222 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 KCNQ5Q9NR82 932 aa9.43□□□□□ -0.9
VPS50-212ENST00000476413 NSFL1CQ9UNZ2 370 aaKnown RBP9.43□□□□□ -0.9
VPS50-212ENST00000476413 B3GALT4O96024 378 aa9.42□□□□□ -0.9
VPS50-212ENST00000476413 PWP1Q13610 501 aa9.42□□□□□ -0.9
VPS50-212ENST00000476413 RASIP1Q5U651 963 aa9.42□□□□□ -0.9
VPS50-212ENST00000476413 C20orf204Q6ZNR8 217 aa9.42□□□□□ -0.9
VPS50-212ENST00000476413 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
VPS50-212ENST00000476413 TLR6Q9Y2C9 796 aa9.42□□□□□ -0.9
VPS50-212ENST00000476413 PTPRAP18433 802 aa9.41□□□□□ -0.9
VPS50-212ENST00000476413 GBP2P32456 591 aaPredicted RBP9.41□□□□□ -0.9
VPS50-212ENST00000476413 SRSF11Q05519 484 aaKnown RBP9.41□□□□□ -0.9
VPS50-212ENST00000476413 PCDH1Q08174 1060 aa9.41□□□□□ -0.9
VPS50-212ENST00000476413 RELL1Q8IUW5 271 aa9.41□□□□□ -0.9
VPS50-212ENST00000476413 GOLGA6L1Q8N7Z2 621 aa9.41□□□□□ -0.9
VPS50-212ENST00000476413 ACDQ96AP0 544 aa9.41□□□□□ -0.9
VPS50-212ENST00000476413 LACRTQ9GZZ8 138 aa9.41□□□□□ -0.9
VPS50-212ENST00000476413 MINDY4BA8MYZ0 360 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 EPXP11678 715 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 RLBP1P12271 317 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 EPHA1P21709 976 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 EIF4A3P38919 411 aaKnown RBP9.4□□□□□ -0.9
VPS50-212ENST00000476413 ZNF157P51786 506 aaPredicted RBP9.4□□□□□ -0.9
VPS50-212ENST00000476413 AGMOQ6ZNB7 445 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 MICALL1Q8N3F8 863 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 RASGRP4Q8TDF6 673 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 TMEM39AQ9NV64 488 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 PRKAG2Q9UGJ0 569 aa9.4□□□□□ -0.9
VPS50-212ENST00000476413 GPN3Q9UHW5 284 aaPredicted RBP9.4□□□□□ -0.9
VPS50-212ENST00000476413 GDF2Q9UK05 429 aaPredicted RBP9.4□□□□□ -0.9
VPS50-212ENST00000476413 ALBP02768 609 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 ESRRAP11474 423 aaPredicted RBP9.39□□□□□ -0.91
VPS50-212ENST00000476413 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
VPS50-212ENST00000476413 BAG6P46379 1132 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 GNL2Q13823 731 aaKnown RBP9.39□□□□□ -0.91
VPS50-212ENST00000476413 LCE2CQ5TA81 110 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 PCNX4Q63HM2 1172 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 TTBK2Q6IQ55 1244 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 FBXL19Q6PCT2 694 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 KIAA0825Q8IV33 1275 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 STK35Q8TDR2 534 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 UBXN4Q92575 508 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 EAF1Q96JC9 268 aaPredicted RBP9.39□□□□□ -0.91
VPS50-212ENST00000476413 SPON2Q9BUD6 331 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 TANGO6Q9C0B7 1094 aa9.39□□□□□ -0.91
VPS50-212ENST00000476413 GREM1O60565 184 aa9.38□□□□□ -0.91
VPS50-212ENST00000476413 PF4P02776 101 aa9.38□□□□□ -0.91
VPS50-212ENST00000476413 BMP6P22004 513 aa9.38□□□□□ -0.91
VPS50-212ENST00000476413 DNAJA1P31689 397 aaKnown RBP9.38□□□□□ -0.91
VPS50-212ENST00000476413 RPS26P62854 115 aaKnown RBP9.38□□□□□ -0.91
VPS50-212ENST00000476413 ZNF787Q6DD87 383 aa9.38□□□□□ -0.91
VPS50-212ENST00000476413 GDF6Q6KF10 455 aaPredicted RBP9.38□□□□□ -0.91
VPS50-212ENST00000476413 ZNF296Q8WUU4 475 aaPredicted RBP9.38□□□□□ -0.91
VPS50-212ENST00000476413 NUDT8Q8WV74 236 aa9.38□□□□□ -0.91
VPS50-212ENST00000476413 GPRASP2Q96D09 838 aa9.38□□□□□ -0.91
VPS50-212ENST00000476413 RGS9O75916 674 aaPredicted RBP9.37□□□□□ -0.91
VPS50-212ENST00000476413 ADAMTS2O95450 1211 aa9.37□□□□□ -0.91
VPS50-212ENST00000476413 FGRP09769 529 aa9.37□□□□□ -0.91
VPS50-212ENST00000476413 ATF4P18848 351 aaPredicted RBP9.37□□□□□ -0.91
VPS50-212ENST00000476413 CDC27P30260 824 aa9.37□□□□□ -0.91
VPS50-212ENST00000476413 LMNB2Q03252 620 aa9.37□□□□□ -0.91
VPS50-212ENST00000476413 CAMK2GQ13555 558 aaPredicted RBP9.37□□□□□ -0.91
VPS50-212ENST00000476413 HGSNATQ68CP4 663 aa9.37□□□□□ -0.91
VPS50-212ENST00000476413 SOX1O00570 391 aaPredicted RBP9.36□□□□□ -0.91
VPS50-212ENST00000476413 ALAS2P22557 587 aa9.36□□□□□ -0.91
VPS50-212ENST00000476413 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
VPS50-212ENST00000476413 ARID5AQ03989 594 aa9.36□□□□□ -0.91
VPS50-212ENST00000476413 FAM160A1Q05DH4 1040 aa9.36□□□□□ -0.91
VPS50-212ENST00000476413 MCF2L2Q86YR7 1114 aa9.36□□□□□ -0.91
VPS50-212ENST00000476413 NME2P22392 152 aa9.35□□□□□ -0.91
VPS50-212ENST00000476413 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
VPS50-212ENST00000476413 IRF7Q92985 503 aa9.35□□□□□ -0.91
VPS50-212ENST00000476413 JPH1Q9HDC5 661 aaPredicted RBP9.35□□□□□ -0.91
VPS50-212ENST00000476413 PPP1R1BQ9UD71 204 aaPredicted RBP9.35□□□□□ -0.91
VPS50-212ENST00000476413 PCDHB5Q9Y5E4 795 aa9.35□□□□□ -0.91
VPS50-212ENST00000476413 H3BRJ5 948 aa9.34□□□□□ -0.91
VPS50-212ENST00000476413 TM4SF5O14894 197 aa9.34□□□□□ -0.91
VPS50-212ENST00000476413 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
VPS50-212ENST00000476413 CRKP46108 304 aa9.34□□□□□ -0.91
VPS50-212ENST00000476413 PPP2R3AQ06190 1150 aa9.34□□□□□ -0.91
VPS50-212ENST00000476413 IKBKEQ14164 716 aa9.34□□□□□ -0.91
VPS50-212ENST00000476413 ILDR2Q71H61 639 aa9.34□□□□□ -0.91
VPS50-212ENST00000476413 PDZD3Q86UT5 571 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms