RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 ACMSDQ8TDX5 336 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 CHMP7Q8WUX9 453 aaPredicted RBP4.42□□□□□ -1.7
LSM2-211ENST00000475835 LZICQ8WZA0 190 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 EXOC4Q96A65 974 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 KIF1BPQ96EK5 621 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.42□□□□□ -1.7
LSM2-211ENST00000475835 TMX1Q9H3N1 280 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 PRKRIP1Q9H875 184 aaPredicted RBP4.42□□□□□ -1.7
LSM2-211ENST00000475835 TCF7L2Q9NQB0 619 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 IFT57Q9NWB7 429 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 ZNF446Q9NWS9 450 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 MKS1Q9NXB0 559 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 TBC1D7Q9P0N9 293 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 CHIC2Q9UKJ5 165 aa4.42□□□□□ -1.7
LSM2-211ENST00000475835 NOSIPQ9Y314 301 aaKnown RBP4.42□□□□□ -1.7
LSM2-211ENST00000475835 LUC7L2Q9Y383 392 aaKnown RBP4.42□□□□□ -1.7
LSM2-211ENST00000475835 DENND4BO75064 1496 aaPredicted RBP4.42□□□□□ -1.7
LSM2-211ENST00000475835 ROCK2O75116 1388 aaKnown RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 MAP3K5Q99683 1374 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 SPDYE4A6NLX3 237 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 TMEM232C9JQI7 657 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 ERC2O15083 957 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 PRC1O43663 620 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 CAPN15O75808 1086 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 FOSP01100 380 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 RBP3P10745 1247 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 ZFXP17010 805 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 EIF4BP23588 611 aaKnown RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 IL4RP24394 825 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 RPL13P26373 211 aaKnown RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 CCT8P50990 548 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 SLC8A3P57103 927 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 CTAG1AP78358 180 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 ADCY1Q08828 1119 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 IKQ13123 557 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 FKBP5Q13451 457 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 ARHGEF6Q15052 776 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 RCN1Q15293 331 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.41□□□□□ -1.7
LSM2-211ENST00000475835 BOLA3Q53S33 107 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 RRP12Q5JTH9 1297 aaKnown RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 DUSP27Q5VZP5 1158 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 RCSD1Q6JBY9 416 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 SYT10Q6XYQ8 523 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 PACS2Q86VP3 889 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 PARP9Q8IXQ6 854 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 STK11IPQ8N1F8 1099 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 PAF1Q8N7H5 531 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 ZNF397Q8NF99 534 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 FBXO18Q8NFZ0 1043 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 KIF18AQ8NI77 898 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 TBC1D5Q92609 795 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 DDX11Q96FC9 970 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 MPHOSPH9Q99550 1183 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 CAPS2Q9BXY5 557 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 IRX2Q9BZI1 471 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 TSGA10Q9BZW7 698 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 TANGO6Q9C0B7 1094 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 PDGFDQ9GZP0 370 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 SLKQ9H2G2 1235 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 TSPYL2Q9H2G4 693 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 TAOK3Q9H2K8 898 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 VCX3BQ9H321 246 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 MMADHCQ9H3L0 296 aaPredicted RBP4.41□□□□□ -1.7
LSM2-211ENST00000475835 PANK3Q9H999 370 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 CD248Q9HCU0 757 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 ZNF304Q9HCX3 659 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 RGL1Q9NZL6 768 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 POLG2Q9UHN1 485 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 CFAP45Q9UL16 551 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 MYO6Q9UM54 1294 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 NUDCQ9Y266 331 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 SSX2IPQ9Y2D8 614 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 CAMSAP2Q08AD1 1489 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 MBD5Q9P267 1494 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 CDC42BPAQ5VT25 1732 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 MYO5CQ9NQX4 1742 aa4.41□□□□□ -1.7
LSM2-211ENST00000475835 AATKQ6ZMQ8 1374 aa4.4□□□□□ -1.7
LSM2-211ENST00000475835 KTN1Q86UP2 1357 aaKnown RBP4.4□□□□□ -1.7
LSM2-211ENST00000475835 GTPBP10A4D1E9 387 aaKnown RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 GOLGA6L9A6NEM1 432 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 KIF2AO00139 706 aaPredicted RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 P4HA2O15460 535 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 AHCYL1O43865 530 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 RPS6KA5O75582 802 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 VIL1P09327 827 aaKnown RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 PYGBP11216 843 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 MYCLP1P12525 358 aaPredicted RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 SKIP12755 728 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 IDO1P14902 403 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 KIF5BP33176 963 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 S100A5P33763 92 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 CASP2P42575 452 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 HDAC4P56524 1084 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 TUBA1BP68363 451 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 LAMB3Q13751 1172 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 UBE4AQ14139 1066 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 AKNAD1Q5T1N1 836 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 TTC39BQ5VTQ0 682 aaPredicted RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 SDE2Q6IQ49 451 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms