RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TRAF5O00463 557 aa17.63■□□□□ 0.41
VAMP4-203ENST00000474047 BCAMP50895 628 aa17.63■□□□□ 0.41
VAMP4-203ENST00000474047 FBXO33Q7Z6M2 555 aa17.63■□□□□ 0.41
VAMP4-203ENST00000474047 USP48Q86UV5 1035 aa17.63■□□□□ 0.41
VAMP4-203ENST00000474047 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
VAMP4-203ENST00000474047 CHAF1AQ13111 956 aaPredicted RBP17.62■□□□□ 0.41
VAMP4-203ENST00000474047 KRT26Q7Z3Y9 468 aa17.62■□□□□ 0.41
VAMP4-203ENST00000474047 SULF1Q8IWU6 871 aa17.62■□□□□ 0.41
VAMP4-203ENST00000474047 FGFR2P21802 821 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 FKBP1AP62942 108 aaKnown RBP17.61■□□□□ 0.41
VAMP4-203ENST00000474047 ATP8B2P98198 1209 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
VAMP4-203ENST00000474047 CHMP4BQ9H444 224 aaKnown RBP17.61■□□□□ 0.41
VAMP4-203ENST00000474047 ZNF408Q9H9D4 720 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 GGA3Q9NZ52 723 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 ABT1Q9ULW3 272 aaKnown RBP17.61■□□□□ 0.41
VAMP4-203ENST00000474047 AKAP2Q9Y2D5 859 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 FMR1Q06787 632 aaKnown RBP eCLIP17.61■□□□□ 0.41
VAMP4-203ENST00000474047 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
VAMP4-203ENST00000474047 MFSD14BQ5SR56 506 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 DNAJC5GQ8N7S2 189 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 GNL3LQ9NVN8 582 aaKnown RBP17.61■□□□□ 0.41
VAMP4-203ENST00000474047 DDX19BQ9UMR2 479 aa17.61■□□□□ 0.41
VAMP4-203ENST00000474047 FAM205AQ6ZU69 1335 aa17.6■□□□□ 0.41
VAMP4-203ENST00000474047 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.41
VAMP4-203ENST00000474047 TFCP2Q12800 502 aa17.6■□□□□ 0.41
VAMP4-203ENST00000474047 DLGAP5Q15398 846 aa17.6■□□□□ 0.41
VAMP4-203ENST00000474047 ANGEL2Q5VTE6 544 aaKnown RBP17.6■□□□□ 0.41
VAMP4-203ENST00000474047 CERS5Q8N5B7 392 aa17.6■□□□□ 0.41
VAMP4-203ENST00000474047 KLRG1Q96E93 195 aa17.6■□□□□ 0.41
VAMP4-203ENST00000474047 CELF2O95319 508 aaKnown RBP17.59■□□□□ 0.41
VAMP4-203ENST00000474047 MKRN1Q9UHC7 482 aaKnown RBP17.59■□□□□ 0.41
VAMP4-203ENST00000474047 NBPF9Q3BBW0 867 aa17.58■□□□□ 0.41
VAMP4-203ENST00000474047 TBC1D22AQ8WUA7 517 aa17.58■□□□□ 0.41
VAMP4-203ENST00000474047 NEUROD6Q96NK8 337 aa17.58■□□□□ 0.41
VAMP4-203ENST00000474047 ASTN2O75129 1339 aaPredicted RBP17.58■□□□□ 0.41
VAMP4-203ENST00000474047 POLR2AP24928 1970 aaKnown RBP17.58■□□□□ 0.4
VAMP4-203ENST00000474047 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.4
VAMP4-203ENST00000474047 ADM5C9JUS6 153 aa17.57■□□□□ 0.4
VAMP4-203ENST00000474047 WNT10BO00744 389 aa17.57■□□□□ 0.4
VAMP4-203ENST00000474047 TIMM10P62072 90 aa17.57■□□□□ 0.4
VAMP4-203ENST00000474047 POLA2Q14181 598 aa17.57■□□□□ 0.4
VAMP4-203ENST00000474047 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
VAMP4-203ENST00000474047 GORABQ5T7V8 394 aa17.57■□□□□ 0.4
VAMP4-203ENST00000474047 SSH3Q8TE77 659 aa17.57■□□□□ 0.4
VAMP4-203ENST00000474047 TTF2Q9UNY4 1162 aaKnown RBP17.57■□□□□ 0.4
VAMP4-203ENST00000474047 MYO1BO43795 1136 aa17.56■□□□□ 0.4
VAMP4-203ENST00000474047 CST9Q5W186 159 aa17.56■□□□□ 0.4
VAMP4-203ENST00000474047 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
VAMP4-203ENST00000474047 TRPM7Q96QT4 1865 aa17.56■□□□□ 0.4
VAMP4-203ENST00000474047 ZNF646O15015 1829 aaPredicted RBP17.56■□□□□ 0.4
VAMP4-203ENST00000474047 A0A1B0GUL7 405 aa17.55■□□□□ 0.4
VAMP4-203ENST00000474047 DEFB115Q30KQ5 88 aa17.55■□□□□ 0.4
VAMP4-203ENST00000474047 CFAP100Q494V2 611 aa17.55■□□□□ 0.4
VAMP4-203ENST00000474047 WDR66Q8TBY9 1149 aa17.55■□□□□ 0.4
VAMP4-203ENST00000474047 PITPNM2Q9BZ72 1349 aa17.55■□□□□ 0.4
VAMP4-203ENST00000474047 ADORA1P30542 326 aa17.55■□□□□ 0.4
VAMP4-203ENST00000474047 CEP85Q6P2H3 762 aa17.55■□□□□ 0.4
VAMP4-203ENST00000474047 DLK2Q6UY11 383 aa17.55■□□□□ 0.4
VAMP4-203ENST00000474047 PHKA1P46020 1223 aa17.54■□□□□ 0.4
VAMP4-203ENST00000474047 C2orf69Q8N8R5 385 aa17.54■□□□□ 0.4
VAMP4-203ENST00000474047 XAGE2Q96GT9 111 aa17.54■□□□□ 0.4
VAMP4-203ENST00000474047 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
VAMP4-203ENST00000474047 HMMRO75330 724 aa17.53■□□□□ 0.4
VAMP4-203ENST00000474047 C20orf194Q5TEA3 1177 aa17.53■□□□□ 0.4
VAMP4-203ENST00000474047 CCDC102BQ68D86 513 aa17.53■□□□□ 0.4
VAMP4-203ENST00000474047 APOBEC3FQ8IUX4 373 aaKnown RBP17.53■□□□□ 0.4
VAMP4-203ENST00000474047 MTMR14Q8NCE2 650 aa17.53■□□□□ 0.4
VAMP4-203ENST00000474047 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
VAMP4-203ENST00000474047 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
VAMP4-203ENST00000474047 SEMA3EO15041 775 aa17.52■□□□□ 0.4
VAMP4-203ENST00000474047 GRM1Q13255 1194 aa17.52■□□□□ 0.4
VAMP4-203ENST00000474047 RPAP2Q8IXW5 612 aaPredicted RBP17.52■□□□□ 0.4
VAMP4-203ENST00000474047 CDCA5Q96FF9 252 aa17.52■□□□□ 0.4
VAMP4-203ENST00000474047 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.4
VAMP4-203ENST00000474047 SERPINA10Q9UK55 444 aa17.52■□□□□ 0.4
VAMP4-203ENST00000474047 MAST3O60307 1309 aa17.52■□□□□ 0.39
VAMP4-203ENST00000474047 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.39
VAMP4-203ENST00000474047 SPDYE6P0CI01 402 aa17.52■□□□□ 0.39
VAMP4-203ENST00000474047 VEZTQ9HBM0 779 aa17.52■□□□□ 0.39
VAMP4-203ENST00000474047 GBA2Q9HCG7 927 aaPredicted RBP17.52■□□□□ 0.39
VAMP4-203ENST00000474047 NOP58Q9Y2X3 529 aaKnown RBP17.52■□□□□ 0.39
VAMP4-203ENST00000474047 SUGT1Q9Y2Z0 365 aa17.52■□□□□ 0.39
VAMP4-203ENST00000474047 TLL2Q9Y6L7 1015 aa17.52■□□□□ 0.39
VAMP4-203ENST00000474047 MYH13Q9UKX3 1938 aa17.52■□□□□ 0.39
VAMP4-203ENST00000474047 RASSF10A6NK89 507 aa17.51■□□□□ 0.39
VAMP4-203ENST00000474047 NF2P35240 595 aa17.51■□□□□ 0.39
VAMP4-203ENST00000474047 CRKP46108 304 aa17.51■□□□□ 0.39
VAMP4-203ENST00000474047 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
VAMP4-203ENST00000474047 TEKT1Q969V4 418 aa17.51■□□□□ 0.39
VAMP4-203ENST00000474047 ZBED3Q96IU2 234 aaPredicted RBP17.51■□□□□ 0.39
VAMP4-203ENST00000474047 PRMT6Q96LA8 375 aaPredicted RBP17.51■□□□□ 0.39
VAMP4-203ENST00000474047 PCDHAC2Q9Y5I4 1007 aa17.51■□□□□ 0.39
VAMP4-203ENST00000474047 CLRN2A0PK11 232 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 ECE1P42892 770 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 VEGFBP49765 207 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 LDHBP07195 334 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms