RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CWC27Q6UX04 472 aaKnown RBP13.01□□□□□ -0.33
SP140-208ENST00000473711 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 ANTXR1Q9H6X2 564 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 ZNF804BA4D1E1 1349 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 HIP1O00291 1037 aa13□□□□□ -0.33
SP140-208ENST00000473711 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
SP140-208ENST00000473711 KBTBD3Q8NAB2 608 aa13□□□□□ -0.33
SP140-208ENST00000473711 FAM84BQ96KN1 310 aaPredicted RBP13□□□□□ -0.33
SP140-208ENST00000473711 C22orf23Q9BZE7 217 aa13□□□□□ -0.33
SP140-208ENST00000473711 NSFL1CQ9UNZ2 370 aaKnown RBP13□□□□□ -0.33
SP140-208ENST00000473711 LEMD3Q9Y2U8 911 aa13□□□□□ -0.33
SP140-208ENST00000473711 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 XDHP47989 1333 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
SP140-208ENST00000473711 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 KLRK1P26718 216 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 NMIQ13287 307 aaPredicted RBP12.99□□□□□ -0.33
SP140-208ENST00000473711 CAVIN4Q5BKX8 364 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 FBXO33Q7Z6M2 555 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 VPS37DQ86XT2 251 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 TBC1D32Q96NH3 1257 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 USP26Q9BXU7 913 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 GNL3LQ9NVN8 582 aaKnown RBP12.99□□□□□ -0.33
SP140-208ENST00000473711 HMG20BQ9P0W2 317 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 IQSEC3Q9UPP2 1182 aaPredicted RBP12.99□□□□□ -0.33
SP140-208ENST00000473711 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
SP140-208ENST00000473711 SGSM2O43147 1006 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 REC8O95072 547 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 CHGBP05060 677 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 ATP2B4P23634 1241 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 HIBADHP31937 336 aaKnown RBP12.98□□□□□ -0.33
SP140-208ENST00000473711 SPATA5Q8NB90 893 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 FAM227BQ96M60 508 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
SP140-208ENST00000473711 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 IL25Q9H293 177 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 GGA1Q9UJY5 639 aa12.98□□□□□ -0.33
SP140-208ENST00000473711 COLQQ9Y215 455 aaPredicted RBP12.98□□□□□ -0.33
SP140-208ENST00000473711 RNF113AO15541 343 aaKnown RBP12.97□□□□□ -0.33
SP140-208ENST00000473711 UFL1O94874 794 aa12.97□□□□□ -0.33
SP140-208ENST00000473711 CYP2E1P05181 493 aaPredicted RBP12.97□□□□□ -0.33
SP140-208ENST00000473711 POLD1P28340 1107 aa12.97□□□□□ -0.33
SP140-208ENST00000473711 ANP32AP39687 249 aaKnown RBP12.97□□□□□ -0.33
SP140-208ENST00000473711 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
SP140-208ENST00000473711 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
SP140-208ENST00000473711 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
SP140-208ENST00000473711 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
SP140-208ENST00000473711 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
SP140-208ENST00000473711 TMX4Q9H1E5 349 aaPredicted RBP12.97□□□□□ -0.33
SP140-208ENST00000473711 PIH1D3Q9NQM4 214 aaKnown RBP12.97□□□□□ -0.33
SP140-208ENST00000473711 A0A0D9SFI3 127 aa12.96□□□□□ -0.33
SP140-208ENST00000473711 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
SP140-208ENST00000473711 TTF1Q15361 905 aaPredicted RBP12.96□□□□□ -0.33
SP140-208ENST00000473711 KIAA1211Q6ZU35 1233 aa12.96□□□□□ -0.33
SP140-208ENST00000473711 MPNDQ8N594 471 aa12.96□□□□□ -0.33
SP140-208ENST00000473711 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.33
SP140-208ENST00000473711 ANO2Q9NQ90 1003 aa12.96□□□□□ -0.33
SP140-208ENST00000473711 PODXL2Q9NZ53 605 aa12.96□□□□□ -0.33
SP140-208ENST00000473711 POLLQ9UGP5 575 aa12.96□□□□□ -0.33
SP140-208ENST00000473711 IRS2Q9Y4H2 1338 aa12.95□□□□□ -0.34
SP140-208ENST00000473711 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
SP140-208ENST00000473711 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
SP140-208ENST00000473711 DPEP1P16444 411 aa12.95□□□□□ -0.34
SP140-208ENST00000473711 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
SP140-208ENST00000473711 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
SP140-208ENST00000473711 SEC62Q99442 399 aaKnown RBP12.95□□□□□ -0.34
SP140-208ENST00000473711 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
SP140-208ENST00000473711 DENND2AQ9ULE3 1009 aa12.95□□□□□ -0.34
SP140-208ENST00000473711 AK9Q5TCS8 1911 aa12.95□□□□□ -0.34
SP140-208ENST00000473711 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
SP140-208ENST00000473711 ARAP2Q8WZ64 1704 aa12.94□□□□□ -0.34
SP140-208ENST00000473711 IDH1O75874 414 aaKnown RBP12.94□□□□□ -0.34
SP140-208ENST00000473711 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
SP140-208ENST00000473711 ZMYM1Q5SVZ6 1142 aa12.94□□□□□ -0.34
SP140-208ENST00000473711 C15orf52Q6ZUT6 534 aaKnown RBP12.94□□□□□ -0.34
SP140-208ENST00000473711 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
SP140-208ENST00000473711 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.94□□□□□ -0.34
SP140-208ENST00000473711 LSG1Q9H089 658 aaKnown RBP12.94□□□□□ -0.34
SP140-208ENST00000473711 HELLSQ9NRZ9 838 aa12.94□□□□□ -0.34
SP140-208ENST00000473711 C10orf71Q711Q0 1435 aa12.94□□□□□ -0.34
SP140-208ENST00000473711 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
SP140-208ENST00000473711 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
SP140-208ENST00000473711 SEMA3EO15041 775 aa12.93□□□□□ -0.34
SP140-208ENST00000473711 ZFYP08048 801 aaPredicted RBP12.93□□□□□ -0.34
SP140-208ENST00000473711 PTH1RQ03431 593 aa12.93□□□□□ -0.34
SP140-208ENST00000473711 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
SP140-208ENST00000473711 WASHC4Q2M389 1173 aa12.93□□□□□ -0.34
SP140-208ENST00000473711 MCMDC2Q4G0Z9 681 aa12.93□□□□□ -0.34
SP140-208ENST00000473711 ZSCAN25Q6NSZ9 544 aa12.93□□□□□ -0.34
SP140-208ENST00000473711 DPP8Q6V1X1 898 aaPredicted RBP12.93□□□□□ -0.34
SP140-208ENST00000473711 CCDC129Q6ZRS4 1044 aa12.93□□□□□ -0.34
SP140-208ENST00000473711 ZNF804AQ7Z570 1209 aa12.93□□□□□ -0.34
SP140-208ENST00000473711 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
SP140-208ENST00000473711 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
SP140-208ENST00000473711 RAD50Q92878 1312 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 KCNA3P22001 575 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms