RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CDAN1Q8IWY9 1227 aa16.2■□□□□ 0.18
TRAF4-209ENST00000473421 PTPN18Q99952 460 aa16.2■□□□□ 0.18
TRAF4-209ENST00000473421 USP2O75604 605 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-209ENST00000473421 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
TRAF4-209ENST00000473421 DLGAP5Q15398 846 aa16.19■□□□□ 0.18
TRAF4-209ENST00000473421 CD99L2Q8TCZ2 262 aa16.19■□□□□ 0.18
TRAF4-209ENST00000473421 ANKRD2Q9GZV1 360 aa16.19■□□□□ 0.18
TRAF4-209ENST00000473421 A0A1B0GUL6 1792 aa16.18■□□□□ 0.18
TRAF4-209ENST00000473421 KIAA0100Q14667 2235 aaKnown RBP16.18■□□□□ 0.18
TRAF4-209ENST00000473421 FOXO4P98177 505 aa16.18■□□□□ 0.18
TRAF4-209ENST00000473421 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
TRAF4-209ENST00000473421 CRHR2Q13324 411 aa16.18■□□□□ 0.18
TRAF4-209ENST00000473421 CFAP100Q494V2 611 aa16.18■□□□□ 0.18
TRAF4-209ENST00000473421 MPHOSPH8Q99549 860 aa16.18■□□□□ 0.18
TRAF4-209ENST00000473421 MANSC4A6NHS7 340 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-209ENST00000473421 EN2P19622 333 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-209ENST00000473421 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-209ENST00000473421 EPHA10Q5JZY3 1008 aa16.17■□□□□ 0.18
TRAF4-209ENST00000473421 MTMR14Q8NCE2 650 aa16.17■□□□□ 0.18
TRAF4-209ENST00000473421 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
TRAF4-209ENST00000473421 ZNF594Q96JF6 807 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-209ENST00000473421 LAMB1P07942 1786 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 SPDYE2BA6NHP3 402 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 SPDYE6P0CI01 402 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 KCNJ4P48050 445 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 FLIIQ13045 1269 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 HABP4Q5JVS0 413 aaKnown RBP16.16■□□□□ 0.18
TRAF4-209ENST00000473421 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 VEZTQ9HBM0 779 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 PTPN22Q9Y2R2 807 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 ECM29Q5VYK3 1845 aa16.16■□□□□ 0.18
TRAF4-209ENST00000473421 F6X3S4 739 aa16.15■□□□□ 0.18
TRAF4-209ENST00000473421 ALDH1A1P00352 501 aa16.15■□□□□ 0.18
TRAF4-209ENST00000473421 ZBTB48P10074 688 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-209ENST00000473421 IL1R1P14778 569 aa16.15■□□□□ 0.18
TRAF4-209ENST00000473421 RASA3Q14644 834 aa16.15■□□□□ 0.18
TRAF4-209ENST00000473421 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
TRAF4-209ENST00000473421 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
TRAF4-209ENST00000473421 DNAAF4Q8WXU2 420 aa16.15■□□□□ 0.18
TRAF4-209ENST00000473421 OTOFQ9HC10 1997 aa16.15■□□□□ 0.18
TRAF4-209ENST00000473421 MMP14P50281 582 aa16.14■□□□□ 0.17
TRAF4-209ENST00000473421 INHBEP58166 350 aa16.14■□□□□ 0.17
TRAF4-209ENST00000473421 GRIK5Q16478 980 aa16.14■□□□□ 0.17
TRAF4-209ENST00000473421 MS4A4AQ96JQ5 239 aa16.14■□□□□ 0.17
TRAF4-209ENST00000473421 COL1A1P02452 1464 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-209ENST00000473421 ANKRD18BA2A2Z9 1011 aa16.13■□□□□ 0.17
TRAF4-209ENST00000473421 PPP1R12BO60237 982 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-209ENST00000473421 PLIN1O60240 522 aa16.13■□□□□ 0.17
TRAF4-209ENST00000473421 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-209ENST00000473421 LINS1Q8NG48 757 aa16.13■□□□□ 0.17
TRAF4-209ENST00000473421 TEPSINQ96N21 525 aa16.13■□□□□ 0.17
TRAF4-209ENST00000473421 ELP3Q9H9T3 547 aa16.13■□□□□ 0.17
TRAF4-209ENST00000473421 TESPA1A2RU30 521 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-209ENST00000473421 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
TRAF4-209ENST00000473421 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-209ENST00000473421 ARMC5Q96C12 935 aa16.12■□□□□ 0.17
TRAF4-209ENST00000473421 TDRD3Q9H7E2 651 aaKnown RBP16.12■□□□□ 0.17
TRAF4-209ENST00000473421 ZSWIM8A7E2V4 1837 aa16.12■□□□□ 0.17
TRAF4-209ENST00000473421 VAMP4O75379 141 aa16.11■□□□□ 0.17
TRAF4-209ENST00000473421 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.178e-14■■■■□ 26.3
TRAF4-209ENST00000473421 IFIT5Q13325 482 aaKnown RBP16.11■□□□□ 0.17
TRAF4-209ENST00000473421 SUPT20HL1Q3ZLR7 823 aa16.11■□□□□ 0.17
TRAF4-209ENST00000473421 BEND3Q5T5X7 828 aa16.11■□□□□ 0.17
TRAF4-209ENST00000473421 BRI3BPQ8WY22 251 aa16.11■□□□□ 0.17
TRAF4-209ENST00000473421 OPTNQ96CV9 577 aa16.11■□□□□ 0.17
TRAF4-209ENST00000473421 PUS3Q9BZE2 481 aaKnown RBP16.11■□□□□ 0.17
TRAF4-209ENST00000473421 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
TRAF4-209ENST00000473421 ZNF70Q9UC06 446 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-209ENST00000473421 CHMP3Q9Y3E7 222 aa16.11■□□□□ 0.17
TRAF4-209ENST00000473421 PPP2R3BQ9Y5P8 575 aa16.11■□□□□ 0.17
TRAF4-209ENST00000473421 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
TRAF4-209ENST00000473421 GYG1P46976 350 aa16.1■□□□□ 0.17
TRAF4-209ENST00000473421 SP3Q02447 781 aa16.1■□□□□ 0.17
TRAF4-209ENST00000473421 ZNF804AQ7Z570 1209 aa16.1■□□□□ 0.17
TRAF4-209ENST00000473421 ERO1AQ96HE7 468 aa16.1■□□□□ 0.17
TRAF4-209ENST00000473421 TMEM39BQ9GZU3 492 aa16.1■□□□□ 0.17
TRAF4-209ENST00000473421 MYH16Q9H6N6 1097 aa16.1■□□□□ 0.17
TRAF4-209ENST00000473421 MYCP01106 439 aaPredicted RBP16.09■□□□□ 0.17
TRAF4-209ENST00000473421 IREB2P48200 963 aaKnown RBP16.09■□□□□ 0.17
TRAF4-209ENST00000473421 FKBP1AP62942 108 aaKnown RBP16.09■□□□□ 0.17
TRAF4-209ENST00000473421 CCDC27Q2M243 656 aa16.09■□□□□ 0.17
TRAF4-209ENST00000473421 SPDYE2Q495Y8 402 aa16.09■□□□□ 0.17
TRAF4-209ENST00000473421 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
TRAF4-209ENST00000473421 ANKRD13AQ8IZ07 590 aa16.09■□□□□ 0.17
TRAF4-209ENST00000473421 FAM43AQ8N2R8 423 aa16.09■□□□□ 0.17
TRAF4-209ENST00000473421 TDRD7Q8NHU6 1098 aaKnown RBP16.09■□□□□ 0.17
TRAF4-209ENST00000473421 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
TRAF4-209ENST00000473421 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
TRAF4-209ENST00000473421 PTCH2Q9Y6C5 1203 aa16.09■□□□□ 0.17
TRAF4-209ENST00000473421 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
TRAF4-209ENST00000473421 TCP10L2B9ZVM9 353 aa16.08■□□□□ 0.16
TRAF4-209ENST00000473421 MYO1BO43795 1136 aa16.08■□□□□ 0.16
TRAF4-209ENST00000473421 FXR1P51114 621 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRAF4-209ENST00000473421 KAZALD1Q96I82 304 aa16.08■□□□□ 0.16
TRAF4-209ENST00000473421 FAM84BQ96KN1 310 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-209ENST00000473421 ARHGAP39Q9C0H5 1083 aa16.08■□□□□ 0.16
TRAF4-209ENST00000473421 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
TRAF4-209ENST00000473421 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-209ENST00000473421 FAM205AQ6ZU69 1335 aa16.08■□□□□ 0.16
TRAF4-209ENST00000473421 UNCXA6NJT0 531 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms