RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
CDHR3-209ENST00000472116 Q7L0L9 218 aa13.42□□□□□ -0.26
CDHR3-209ENST00000472116 RAET1EQ8TD07 263 aa13.42□□□□□ -0.26
CDHR3-209ENST00000472116 OPTNQ96CV9 577 aa13.42□□□□□ -0.26
CDHR3-209ENST00000472116 MXD3Q9BW11 206 aa13.42□□□□□ -0.26
CDHR3-209ENST00000472116 GTF2A2P52657 109 aa13.41□□□□□ -0.26
CDHR3-209ENST00000472116 KIAA0825Q8IV33 1275 aa13.41□□□□□ -0.26
CDHR3-209ENST00000472116 TRIM47Q96LD4 638 aa13.41□□□□□ -0.26
CDHR3-209ENST00000472116 ELP3Q9H9T3 547 aa13.41□□□□□ -0.26
CDHR3-209ENST00000472116 MTMR10Q9NXD2 777 aa13.41□□□□□ -0.26
CDHR3-209ENST00000472116 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
CDHR3-209ENST00000472116 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
CDHR3-209ENST00000472116 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
CDHR3-209ENST00000472116 CCL5P13501 91 aa13.4□□□□□ -0.26
CDHR3-209ENST00000472116 GRK4P32298 578 aa13.4□□□□□ -0.26
CDHR3-209ENST00000472116 GJA5P36382 358 aa13.4□□□□□ -0.26
CDHR3-209ENST00000472116 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
CDHR3-209ENST00000472116 UBE2Q1Q7Z7E8 422 aa13.4□□□□□ -0.26
CDHR3-209ENST00000472116 ANKRD18AQ8IVF6 992 aa13.4□□□□□ -0.26
CDHR3-209ENST00000472116 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
CDHR3-209ENST00000472116 SSC5DA1L4H1 1573 aa13.4□□□□□ -0.26
CDHR3-209ENST00000472116 TLR2O60603 784 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 CAPN2P17655 700 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 BMP8BP34820 402 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 TTLL5Q6EMB2 1281 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 HELBQ8NG08 1087 aaPredicted RBP13.39□□□□□ -0.27
CDHR3-209ENST00000472116 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 BRI3BPQ8WY22 251 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 ARHGAP39Q9C0H5 1083 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 MYH3P11055 1940 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
CDHR3-209ENST00000472116 MGAMO43451 1857 aa13.38□□□□□ -0.27
CDHR3-209ENST00000472116 ATP5J2-PTCD1G3V325 749 aa13.38□□□□□ -0.27
CDHR3-209ENST00000472116 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
CDHR3-209ENST00000472116 USP2O75604 605 aaPredicted RBP13.38□□□□□ -0.27
CDHR3-209ENST00000472116 ECM2O94769 699 aaPredicted RBP13.38□□□□□ -0.27
CDHR3-209ENST00000472116 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
CDHR3-209ENST00000472116 MS4A4AQ96JQ5 239 aa13.38□□□□□ -0.27
CDHR3-209ENST00000472116 VEZTQ9HBM0 779 aa13.38□□□□□ -0.27
CDHR3-209ENST00000472116 RIPOR2Q9Y4F9 1068 aa13.38□□□□□ -0.27
CDHR3-209ENST00000472116 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
CDHR3-209ENST00000472116 LRIT3Q3SXY7 679 aa13.37□□□□□ -0.27
CDHR3-209ENST00000472116 NBPF12Q5TAG4 269 aaPredicted RBP13.37□□□□□ -0.27
CDHR3-209ENST00000472116 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
CDHR3-209ENST00000472116 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
CDHR3-209ENST00000472116 ZCCHC17Q9NP64 241 aaKnown RBP13.37□□□□□ -0.27
CDHR3-209ENST00000472116 SRRDQ9UH36 339 aa13.37□□□□□ -0.27
CDHR3-209ENST00000472116 CSADQ9Y600 493 aa13.37□□□□□ -0.27
CDHR3-209ENST00000472116 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
CDHR3-209ENST00000472116 FMNL1O95466 1100 aaPredicted RBP13.36□□□□□ -0.27
CDHR3-209ENST00000472116 COL9A1P20849 921 aa13.36□□□□□ -0.27
CDHR3-209ENST00000472116 TDHQ8IZJ6 230 aa13.36□□□□□ -0.27
CDHR3-209ENST00000472116 ZBED3Q96IU2 234 aaPredicted RBP13.36□□□□□ -0.27
CDHR3-209ENST00000472116 CDC5LQ99459 802 aaKnown RBP13.36□□□□□ -0.27
CDHR3-209ENST00000472116 GDF15Q99988 308 aa13.36□□□□□ -0.27
CDHR3-209ENST00000472116 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
CDHR3-209ENST00000472116 SGPL1O95470 568 aa13.35□□□□□ -0.27
CDHR3-209ENST00000472116 TFRCP02786 760 aaKnown RBP13.35□□□□□ -0.27
CDHR3-209ENST00000472116 CETPP11597 493 aa13.35□□□□□ -0.27
CDHR3-209ENST00000472116 PSMC4P43686 418 aa13.35□□□□□ -0.27
CDHR3-209ENST00000472116 BCAMP50895 628 aa13.35□□□□□ -0.27
CDHR3-209ENST00000472116 TNFAIP1Q13829 316 aa13.35□□□□□ -0.27
CDHR3-209ENST00000472116 CCT4P50991 539 aaKnown RBP13.34□□□□□ -0.27
CDHR3-209ENST00000472116 GTF2IP78347 998 aa13.34□□□□□ -0.27
CDHR3-209ENST00000472116 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
CDHR3-209ENST00000472116 SLAIN1Q8ND83 568 aa13.34□□□□□ -0.27
CDHR3-209ENST00000472116 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
CDHR3-209ENST00000472116 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
CDHR3-209ENST00000472116 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
CDHR3-209ENST00000472116 IRS2Q9Y4H2 1338 aa13.34□□□□□ -0.27
CDHR3-209ENST00000472116 PDE8AO60658 829 aa13.33□□□□□ -0.28
CDHR3-209ENST00000472116 OSBPP22059 807 aa13.33□□□□□ -0.28
CDHR3-209ENST00000472116 RBM5P52756 815 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDHR3-209ENST00000472116 RASA3Q14644 834 aa13.33□□□□□ -0.28
CDHR3-209ENST00000472116 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
CDHR3-209ENST00000472116 C7orf61Q8IZ16 206 aa13.33□□□□□ -0.28
CDHR3-209ENST00000472116 MTMR14Q8NCE2 650 aa13.33□□□□□ -0.28
CDHR3-209ENST00000472116 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
CDHR3-209ENST00000472116 TRIM28Q13263 835 aaKnown RBP13.32□□□□□ -0.28
CDHR3-209ENST00000472116 NECAB2Q7Z6G3 386 aa13.32□□□□□ -0.28
CDHR3-209ENST00000472116 UBE2OQ9C0C9 1292 aaKnown RBP13.32□□□□□ -0.28
CDHR3-209ENST00000472116 UNC93B1Q9H1C4 597 aa13.32□□□□□ -0.28
CDHR3-209ENST00000472116 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
CDHR3-209ENST00000472116 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
CDHR3-209ENST00000472116 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
CDHR3-209ENST00000472116 VGLL4Q14135 290 aa13.31□□□□□ -0.28
CDHR3-209ENST00000472116 CFAP100Q494V2 611 aa13.31□□□□□ -0.28
CDHR3-209ENST00000472116 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
CDHR3-209ENST00000472116 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
CDHR3-209ENST00000472116 CPA4Q9UI42 421 aa13.31□□□□□ -0.28
CDHR3-209ENST00000472116 LEMD3Q9Y2U8 911 aa13.31□□□□□ -0.28
CDHR3-209ENST00000472116 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
CDHR3-209ENST00000472116 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
CDHR3-209ENST00000472116 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
CDHR3-209ENST00000472116 F8W031 263 aaPredicted RBP13.3□□□□□ -0.28
CDHR3-209ENST00000472116 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
CDHR3-209ENST00000472116 KCNJ4P48050 445 aa13.3□□□□□ -0.28
CDHR3-209ENST00000472116 FCGRTP55899 365 aa13.3□□□□□ -0.28
CDHR3-209ENST00000472116 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms