RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ETFBKMTQ8IXQ9 262 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 RGL4Q8IZJ4 473 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 USP20Q9Y2K6 914 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 TMEM88BA6NKF7 163 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 OPLAHO14841 1288 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 MAP3K6O95382 1288 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 C1QTNF9P0C862 333 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 RARAP10276 462 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 BRD2P25440 801 aaKnown RBP2.97□□□□□ -1.93
UBXN4-207ENST00000471246 NAA30Q147X3 362 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-207ENST00000471246 TRIP4Q15650 581 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-207ENST00000471246 MLANAQ16655 118 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 SPRED2Q7Z698 418 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 ZC3H7BQ9UGR2 993 aaKnown RBP2.97□□□□□ -1.93
UBXN4-207ENST00000471246 SEPT3Q9UH03 358 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 RTCBQ9Y3I0 505 aaKnown RBP2.97□□□□□ -1.93
UBXN4-207ENST00000471246 KCNMB2Q9Y691 235 aa2.97□□□□□ -1.93
UBXN4-207ENST00000471246 OVOL3O00110 214 aa2.96□□□□□ -1.94
UBXN4-207ENST00000471246 SART1O43290 800 aaKnown RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 XYLBO75191 536 aa2.96□□□□□ -1.94
UBXN4-207ENST00000471246 PPP1R15AO75807 674 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 SASH3O75995 380 aa2.96□□□□□ -1.94
UBXN4-207ENST00000471246 IGHA2P01877 340 aa2.96□□□□□ -1.94
UBXN4-207ENST00000471246 EIF2AK2P19525 551 aaKnown RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 TARSP26639 723 aaKnown RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 MAP4P27816 1152 aaKnown RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 CD68P34810 354 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 CMTR1Q8N1G2 835 aaKnown RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 BCL7CQ8WUZ0 217 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 PLD4Q96BZ4 506 aa2.96□□□□□ -1.94
UBXN4-207ENST00000471246 PPP1R16BQ96T49 567 aa2.96□□□□□ -1.94
UBXN4-207ENST00000471246 RC3H2Q9HBD1 1191 aaKnown RBP2.96□□□□□ -1.94
UBXN4-207ENST00000471246 C11orf16Q9NQ32 467 aa2.96□□□□□ -1.94
UBXN4-207ENST00000471246 HIF3AQ9Y2N7 669 aa2.96□□□□□ -1.94
UBXN4-207ENST00000471246 ZNF503-AS2A6NEH8 195 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 EGFRP00533 1210 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 RNASE1P07998 156 aaKnown RBP2.95□□□□□ -1.94
UBXN4-207ENST00000471246 ADMP35318 185 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 SCNN1AP37088 669 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 ZAP70P43403 619 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 SGO2Q562F6 1265 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 SYDE1Q6ZW31 735 aaPredicted RBP2.95□□□□□ -1.94
UBXN4-207ENST00000471246 ABTB2Q8N961 1025 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 MBNL3Q9NUK0 354 aaKnown RBP2.95□□□□□ -1.94
UBXN4-207ENST00000471246 STIM2Q9P246 746 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 ADAMTS6Q9UKP5 1117 aa2.95□□□□□ -1.94
UBXN4-207ENST00000471246 CARNS1A5YM72 827 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 UBAP1LF5GYI3 381 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 LINC01387J3KSC0 135 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 J3QW42 95 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 ZBTB39O15060 712 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 DDX3YO15523 660 aaKnown RBP2.94□□□□□ -1.94
UBXN4-207ENST00000471246 MMP20O60882 483 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 PSAPP07602 524 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 HOXD8P13378 290 aaPredicted RBP2.94□□□□□ -1.94
UBXN4-207ENST00000471246 ARID4AP29374 1257 aaPredicted RBP2.94□□□□□ -1.94
UBXN4-207ENST00000471246 NRLP54845 237 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 DUOXA2Q1HG44 320 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 LRRN4CLQ8ND94 238 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 HELQQ8TDG4 1101 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 GPR152Q8TDT2 470 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 UBASH3BQ8TF42 649 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 FOXD4L4Q8WXT5 416 aaPredicted RBP2.94□□□□□ -1.94
UBXN4-207ENST00000471246 NSUN5Q96P11 429 aaKnown RBP2.94□□□□□ -1.94
UBXN4-207ENST00000471246 METTL22Q9BUU2 404 aaPredicted RBP2.94□□□□□ -1.94
UBXN4-207ENST00000471246 FAM13BQ9NYF5 915 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 TLR7Q9NYK1 1049 aaKnown RBP2.94□□□□□ -1.94
UBXN4-207ENST00000471246 TRIM33Q9UPN9 1127 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 SLC5A6Q9Y289 635 aa2.94□□□□□ -1.94
UBXN4-207ENST00000471246 PITPNM2Q9BZ72 1349 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 A0A0G2JLL6 359 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-207ENST00000471246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-207ENST00000471246 ADAM11O75078 769 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 MPSTP25325 297 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 SSFA2P28290 1259 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 SOX18P35713 384 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 MTMR3Q13615 1198 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 ANKRD34AQ69YU3 496 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 TXNDC11Q6PKC3 985 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 NLRP13Q86W25 1043 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 ATCAYQ86WG3 371 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 GTF3C2Q8WUA4 911 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-207ENST00000471246 PIK3R5Q8WYR1 880 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 ARID3AQ99856 593 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 TIMELESSQ9UNS1 1208 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 USTQ9Y2C2 406 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 PPME1Q9Y570 386 aa2.93□□□□□ -1.94
UBXN4-207ENST00000471246 FAM170BA6NMN3 283 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 NPIPB6E9PJ23 425 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 SUPT5HO00267 1087 aaKnown RBP2.92□□□□□ -1.94
UBXN4-207ENST00000471246 GHRHP01286 108 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 FUT4P22083 530 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 BNIP3Q12983 259 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 PHLDB3Q6NSJ2 640 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 ERICH6Q7L0X2 663 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 OR13H1Q8NG92 308 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 EDEM1Q92611 657 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 NUDT16Q96DE0 195 aaKnown RBP2.92□□□□□ -1.94
UBXN4-207ENST00000471246 CARD10Q9BWT7 1032 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 MUC3BQ9H195 1237 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 456.1 ms