RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 GRIK5Q16478 980 aa22.08■■□□□ 1.13
LMNA-211ENST00000470199 USP50Q70EL3 339 aaPredicted RBP22.08■■□□□ 1.13
LMNA-211ENST00000470199 PNMA8AQ86V59 439 aaPredicted RBP22.08■■□□□ 1.13
LMNA-211ENST00000470199 LDHDQ86WU2 507 aa22.08■■□□□ 1.13
LMNA-211ENST00000470199 XAGE2Q96GT9 111 aa22.08■■□□□ 1.13
LMNA-211ENST00000470199 NEUROD6Q96NK8 337 aa22.08■■□□□ 1.13
LMNA-211ENST00000470199 PCDHB15Q9Y5E8 787 aa22.08■■□□□ 1.13
LMNA-211ENST00000470199 FAM205AQ6ZU69 1335 aa22.07■■□□□ 1.12
LMNA-211ENST00000470199 USP17L8P0C7I0 530 aa22.07■■□□□ 1.12
LMNA-211ENST00000470199 ZNF280AP59817 542 aaPredicted RBP22.07■■□□□ 1.12
LMNA-211ENST00000470199 MAP1SQ66K74 1059 aaPredicted RBP22.07■■□□□ 1.12
LMNA-211ENST00000470199 CHADLQ6NUI6 762 aa22.07■■□□□ 1.12
LMNA-211ENST00000470199 KIAA0825Q8IV33 1275 aa22.07■■□□□ 1.12
LMNA-211ENST00000470199 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
LMNA-211ENST00000470199 AKAP2Q9Y2D5 859 aa22.07■■□□□ 1.12
LMNA-211ENST00000470199 COL1A1P02452 1464 aaPredicted RBP22.07■■□□□ 1.12
LMNA-211ENST00000470199 ASTN2O75129 1339 aaPredicted RBP22.06■■□□□ 1.12
LMNA-211ENST00000470199 F8W031 263 aaPredicted RBP22.06■■□□□ 1.12
LMNA-211ENST00000470199 APBB1O00213 710 aa22.06■■□□□ 1.12
LMNA-211ENST00000470199 FRAT2O75474 233 aaPredicted RBP22.05■■□□□ 1.12
LMNA-211ENST00000470199 TNNI3KQ59H18 835 aa22.05■■□□□ 1.12
LMNA-211ENST00000470199 CCDC102BQ68D86 513 aa22.05■■□□□ 1.12
LMNA-211ENST00000470199 FPGT-TNNI3KV9GXZ4 949 aa22.05■■□□□ 1.12
LMNA-211ENST00000470199 ARAP2Q8WZ64 1704 aa22.04■■□□□ 1.12
LMNA-211ENST00000470199 HMMRO75330 724 aa22.04■■□□□ 1.12
LMNA-211ENST00000470199 IRX6P78412 446 aaPredicted RBP22.04■■□□□ 1.12
LMNA-211ENST00000470199 FSTL1Q12841 308 aa22.04■■□□□ 1.12
LMNA-211ENST00000470199 KIF4BQ2VIQ3 1234 aa22.04■■□□□ 1.12
LMNA-211ENST00000470199 EXOC6Q8TAG9 804 aa22.04■■□□□ 1.12
LMNA-211ENST00000470199 TLR7Q9NYK1 1049 aaKnown RBP22.04■■□□□ 1.12
LMNA-211ENST00000470199 PCDHAC2Q9Y5I4 1007 aa22.04■■□□□ 1.12
LMNA-211ENST00000470199 MYO3BQ8WXR4 1341 aa22.04■■□□□ 1.12
LMNA-211ENST00000470199 FMR1Q06787 632 aaKnown RBP eCLIP22.03■■□□□ 1.123e-8■■■□□ 14.7
LMNA-211ENST00000470199 MFSD14BQ5SR56 506 aa22.03■■□□□ 1.12
LMNA-211ENST00000470199 EAF2Q96CJ1 260 aaPredicted RBP22.03■■□□□ 1.12
LMNA-211ENST00000470199 DBNDD2Q9BQY9 259 aa22.03■■□□□ 1.12
LMNA-211ENST00000470199 IL1RAPL2Q9NP60 686 aa22.03■■□□□ 1.12
LMNA-211ENST00000470199 MYOZ2Q9NPC6 264 aa22.03■■□□□ 1.12
LMNA-211ENST00000470199 GPR108Q9NPR9 543 aa22.03■■□□□ 1.12
LMNA-211ENST00000470199 ITGBL1O95965 494 aaPredicted RBP22.02■■□□□ 1.12
LMNA-211ENST00000470199 FKBP1AP62942 108 aaKnown RBP22.02■■□□□ 1.12
LMNA-211ENST00000470199 DLK2Q6UY11 383 aa22.02■■□□□ 1.12
LMNA-211ENST00000470199 RHPN1Q8TCX5 695 aa22.02■■□□□ 1.12
LMNA-211ENST00000470199 CCDC8Q9H0W5 538 aaPredicted RBP22.02■■□□□ 1.12
LMNA-211ENST00000470199 CNTROBQ8N137 903 aa22.01■■□□□ 1.11
LMNA-211ENST00000470199 BCL11AQ9H165 835 aa22.01■■□□□ 1.11
LMNA-211ENST00000470199 PGAP2Q9UHJ9 254 aa22.01■■□□□ 1.11
LMNA-211ENST00000470199 RASGRF1Q13972 1273 aa22■■□□□ 1.11
LMNA-211ENST00000470199 SCARF1Q14162 830 aa22■■□□□ 1.11
LMNA-211ENST00000470199 NBPF9Q3BBW0 867 aa22■■□□□ 1.11
LMNA-211ENST00000470199 PI16Q6UXB8 463 aa22■■□□□ 1.11
LMNA-211ENST00000470199 DBNLQ9UJU6 430 aaKnown RBP22■■□□□ 1.11
LMNA-211ENST00000470199 AOX1Q06278 1338 aa22■■□□□ 1.11
LMNA-211ENST00000470199 TRAF5O00463 557 aa21.99■■□□□ 1.11
LMNA-211ENST00000470199 GORABQ5T7V8 394 aa21.99■■□□□ 1.11
LMNA-211ENST00000470199 ERC1Q8IUD2 1116 aa21.99■■□□□ 1.11
LMNA-211ENST00000470199 OGFOD1Q8N543 542 aa21.99■■□□□ 1.11
LMNA-211ENST00000470199 GLIS2Q9BZE0 524 aaPredicted RBP21.99■■□□□ 1.11
LMNA-211ENST00000470199 GNL3LQ9NVN8 582 aaKnown RBP21.99■■□□□ 1.11
LMNA-211ENST00000470199 SCAF8Q9UPN6 1271 aaKnown RBP21.99■■□□□ 1.11
LMNA-211ENST00000470199 HSP90AB4PQ58FF6 505 aa21.98■■□□□ 1.11
LMNA-211ENST00000470199 TTF2Q9UNY4 1162 aaKnown RBP21.98■■□□□ 1.11
LMNA-211ENST00000470199 WNT10BO00744 389 aa21.97■■□□□ 1.11
LMNA-211ENST00000470199 SMARCA5O60264 1052 aaPredicted RBP21.97■■□□□ 1.11
LMNA-211ENST00000470199 HTRA3P83110 453 aa21.97■■□□□ 1.11
LMNA-211ENST00000470199 AACSQ86V21 672 aa21.97■■□□□ 1.11
LMNA-211ENST00000470199 ZC3H15Q8WU90 426 aaKnown RBP21.97■■□□□ 1.11
LMNA-211ENST00000470199 KIF1BPQ96EK5 621 aa21.97■■□□□ 1.11
LMNA-211ENST00000470199 ZBED3Q96IU2 234 aaPredicted RBP21.97■■□□□ 1.11
LMNA-211ENST00000470199 GGA3Q9NZ52 723 aa21.97■■□□□ 1.11
LMNA-211ENST00000470199 HMG20BQ9P0W2 317 aa21.97■■□□□ 1.11
LMNA-211ENST00000470199 HDAC9Q9UKV0 1011 aa21.97■■□□□ 1.11
LMNA-211ENST00000470199 DENND2AQ9ULE3 1009 aa21.97■■□□□ 1.11
LMNA-211ENST00000470199 RAB11FIP3O75154 756 aa21.96■■□□□ 1.11
LMNA-211ENST00000470199 HSPA6P17066 643 aa21.96■■□□□ 1.11
LMNA-211ENST00000470199 CFAP100Q494V2 611 aa21.96■■□□□ 1.11
LMNA-211ENST00000470199 ANGEL2Q5VTE6 544 aaKnown RBP21.96■■□□□ 1.11
LMNA-211ENST00000470199 USP48Q86UV5 1035 aa21.96■■□□□ 1.11
LMNA-211ENST00000470199 TBC1D22AQ8WUA7 517 aa21.96■■□□□ 1.11
LMNA-211ENST00000470199 DCTPP1Q9H773 170 aa21.96■■□□□ 1.11
LMNA-211ENST00000470199 PASKQ96RG2 1323 aa21.96■■□□□ 1.11
LMNA-211ENST00000470199 SEMA3EO15041 775 aa21.95■■□□□ 1.1
LMNA-211ENST00000470199 ARID4AP29374 1257 aaPredicted RBP21.95■■□□□ 1.1
LMNA-211ENST00000470199 MCAMP43121 646 aa21.95■■□□□ 1.1
LMNA-211ENST00000470199 WDR66Q8TBY9 1149 aa21.95■■□□□ 1.1
LMNA-211ENST00000470199 SNRKQ9NRH2 765 aa21.95■■□□□ 1.1
LMNA-211ENST00000470199 ADM5C9JUS6 153 aa21.94■■□□□ 1.1
LMNA-211ENST00000470199 PRDX5P30044 214 aa21.94■■□□□ 1.1
LMNA-211ENST00000470199 DLGAP5Q15398 846 aa21.94■■□□□ 1.1
LMNA-211ENST00000470199 TTC39AQ5SRH9 613 aa21.94■■□□□ 1.1
LMNA-211ENST00000470199 PRMT6Q96LA8 375 aaPredicted RBP21.94■■□□□ 1.1
LMNA-211ENST00000470199 ZBTB22O15209 634 aa21.93■■□□□ 1.1
LMNA-211ENST00000470199 RBM5P52756 815 aaKnown RBP eCLIP21.93■■□□□ 1.1
LMNA-211ENST00000470199 TBC1D9Q6ZT07 1266 aa21.93■■□□□ 1.1
LMNA-211ENST00000470199 SPATA5Q8NB90 893 aa21.93■■□□□ 1.1
LMNA-211ENST00000470199 MYH13Q9UKX3 1938 aa21.92■■□□□ 1.1
LMNA-211ENST00000470199 CRKP46108 304 aa21.92■■□□□ 1.1
LMNA-211ENST00000470199 APLP1P51693 650 aa21.92■■□□□ 1.1
LMNA-211ENST00000470199 CCDC158Q5M9N0 1113 aa21.92■■□□□ 1.1
LMNA-211ENST00000470199 CLASRPQ8N2M8 674 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms