RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 FAM177BA6PVY3 158 aa6.6□□□□□ -1.35
TTC3-213ENST00000469939 DEAF1O75398 565 aaPredicted RBP6.6□□□□□ -1.35
TTC3-213ENST00000469939 ERCC5P28715 1186 aaPredicted RBP6.6□□□□□ -1.35
TTC3-213ENST00000469939 HDLBPQ00341 1268 aaKnown RBP6.6□□□□□ -1.35
TTC3-213ENST00000469939 USPL1Q5W0Q7 1092 aa6.6□□□□□ -1.35
TTC3-213ENST00000469939 GALNT12Q8IXK2 581 aa6.6□□□□□ -1.35
TTC3-213ENST00000469939 UBXN4Q92575 508 aa6.6□□□□□ -1.35
TTC3-213ENST00000469939 HHIPQ96QV1 700 aa6.6□□□□□ -1.35
TTC3-213ENST00000469939 ADAM19Q9H013 955 aa6.6□□□□□ -1.35
TTC3-213ENST00000469939 DNAJC25Q9H1X3 360 aa6.6□□□□□ -1.35
TTC3-213ENST00000469939 SRA1Q9HD15 236 aaKnown RBP6.6□□□□□ -1.35
TTC3-213ENST00000469939 LATS2Q9NRM7 1088 aa6.6□□□□□ -1.35
TTC3-213ENST00000469939 C9orf172C9J069 976 aa6.59□□□□□ -1.35
TTC3-213ENST00000469939 LINC01387J3KSC0 135 aa6.59□□□□□ -1.35
TTC3-213ENST00000469939 EIF1AYO14602 144 aaKnown RBP6.59□□□□□ -1.35
TTC3-213ENST00000469939 SELPP16109 830 aa6.59□□□□□ -1.35
TTC3-213ENST00000469939 C9orf131Q5VYM1 1079 aa6.59□□□□□ -1.35
TTC3-213ENST00000469939 MAP4K3Q8IVH8 894 aa6.59□□□□□ -1.35
TTC3-213ENST00000469939 NXPE3Q969Y0 559 aa6.59□□□□□ -1.35
TTC3-213ENST00000469939 BCL11AQ9H165 835 aa6.59□□□□□ -1.35
TTC3-213ENST00000469939 SH2B1Q9NRF2 756 aaPredicted RBP6.59□□□□□ -1.35
TTC3-213ENST00000469939 SCAMP3O14828 347 aaKnown RBP6.58□□□□□ -1.36
TTC3-213ENST00000469939 EPHA1P21709 976 aa6.58□□□□□ -1.36
TTC3-213ENST00000469939 ITGB7P26010 798 aa6.58□□□□□ -1.36
TTC3-213ENST00000469939 SETDB1Q15047 1291 aa6.58□□□□□ -1.36
TTC3-213ENST00000469939 SF3A1Q15459 793 aaKnown RBP6.58□□□□□ -1.36
TTC3-213ENST00000469939 SHISA2Q6UWI4 295 aa6.58□□□□□ -1.36
TTC3-213ENST00000469939 DCAF11Q8TEB1 546 aa6.58□□□□□ -1.36
TTC3-213ENST00000469939 LENG1Q96BZ8 264 aaPredicted RBP6.58□□□□□ -1.36
TTC3-213ENST00000469939 CSRNP1Q96S65 589 aa6.58□□□□□ -1.36
TTC3-213ENST00000469939 A0A1W2PP55 124 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 DLL1O00548 723 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 TREHO43280 583 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 SMARCA5O60264 1052 aaPredicted RBP6.57□□□□□ -1.36
TTC3-213ENST00000469939 CDC25BP30305 580 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 CABP4P57796 275 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 NRG1Q02297 640 aaPredicted RBP6.57□□□□□ -1.36
TTC3-213ENST00000469939 FMR1Q06787 632 aaKnown RBP eCLIP6.57□□□□□ -1.36
TTC3-213ENST00000469939 DSC3Q14574 896 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 FAM117BQ6P1L5 589 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 TXNDC11Q6PKC3 985 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 IGF2-ASQ6U949 168 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 ASAP3Q8TDY4 903 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 BHLHE41Q9C0J9 482 aaPredicted RBP6.57□□□□□ -1.36
TTC3-213ENST00000469939 NPHS2Q9NP85 383 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 SOX13Q9UN79 622 aa6.57□□□□□ -1.36
TTC3-213ENST00000469939 H3BRJ5 948 aa6.56□□□□□ -1.36
TTC3-213ENST00000469939 PLCB3Q01970 1234 aa6.56□□□□□ -1.36
TTC3-213ENST00000469939 RAD51AP2Q09MP3 1159 aa6.56□□□□□ -1.36
TTC3-213ENST00000469939 KIAA0319Q5VV43 1072 aa6.56□□□□□ -1.36
TTC3-213ENST00000469939 BSNDQ8WZ55 320 aa6.56□□□□□ -1.36
TTC3-213ENST00000469939 CCDC74AQ96AQ1 378 aa6.56□□□□□ -1.36
TTC3-213ENST00000469939 SPATA32Q96LK8 384 aa6.56□□□□□ -1.36
TTC3-213ENST00000469939 USP21Q9UK80 565 aa6.56□□□□□ -1.36
TTC3-213ENST00000469939 FSCN2O14926 492 aa6.55□□□□□ -1.36
TTC3-213ENST00000469939 CANXP27824 592 aaKnown RBP6.55□□□□□ -1.36
TTC3-213ENST00000469939 ADGRE1Q14246 886 aa6.55□□□□□ -1.36
TTC3-213ENST00000469939 MBTPS1Q14703 1052 aa6.55□□□□□ -1.36
TTC3-213ENST00000469939 METTL16Q86W50 562 aaKnown RBP6.55□□□□□ -1.36
TTC3-213ENST00000469939 CCNJLQ8IV13 435 aa6.55□□□□□ -1.36
TTC3-213ENST00000469939 KLHL23Q8NBE8 558 aa6.55□□□□□ -1.36
TTC3-213ENST00000469939 GALNT11Q8NCW6 608 aa6.55□□□□□ -1.36
TTC3-213ENST00000469939 LIN7BQ9HAP6 207 aa6.55□□□□□ -1.36
TTC3-213ENST00000469939 RNF19AQ9NV58 838 aa6.55□□□□□ -1.36
TTC3-213ENST00000469939 METTL12A8MUP2 240 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 PIP4K2BP78356 416 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 VN1R5Q7Z5H4 357 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 TMEM87AQ8NBN3 555 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 WNT8BQ93098 351 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 FAM161BQ96MY7 647 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 TCF12Q99081 682 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 CARD10Q9BWT7 1032 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 MRPL18Q9H0U6 180 aaKnown RBP6.54□□□□□ -1.36
TTC3-213ENST00000469939 EHD4Q9H223 541 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 SEC31BQ9NQW1 1179 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 PARP2Q9UGN5 583 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
TTC3-213ENST00000469939 A0A096LPE4 126 aa6.53□□□□□ -1.36
TTC3-213ENST00000469939 PNMA6FA0A0J9YX94 578 aa6.53□□□□□ -1.36
TTC3-213ENST00000469939 A0A1W2PPZ6 126 aa6.53□□□□□ -1.36
TTC3-213ENST00000469939 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 TM4SF5O14894 197 aa6.53□□□□□ -1.36
TTC3-213ENST00000469939 GADD45BO75293 160 aaPredicted RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 PRPF40AO75400 957 aaKnown RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 LDHBP07195 334 aaKnown RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 CD68P34810 354 aaPredicted RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 XPCQ01831 940 aaPredicted RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 IKBKEQ14164 716 aa6.53□□□□□ -1.36
TTC3-213ENST00000469939 ENOX2Q16206 610 aaKnown RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 RSPO4Q2I0M5 234 aaPredicted RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 TXNRD3Q86VQ6 643 aa6.53□□□□□ -1.36
TTC3-213ENST00000469939 DUSP9Q99956 384 aaKnown RBP6.53□□□□□ -1.36
TTC3-213ENST00000469939 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
TTC3-213ENST00000469939 OSGEPQ9NPF4 335 aa6.53□□□□□ -1.36
TTC3-213ENST00000469939 MAPK8P45983 427 aa6.52□□□□□ -1.37
TTC3-213ENST00000469939 GRIA4P48058 902 aa6.52□□□□□ -1.37
TTC3-213ENST00000469939 ARL4DP49703 201 aa6.52□□□□□ -1.37
TTC3-213ENST00000469939 FOXD4L6Q3SYB3 417 aaPredicted RBP6.52□□□□□ -1.37
TTC3-213ENST00000469939 FOXD4L3Q6VB84 417 aaPredicted RBP6.52□□□□□ -1.37
TTC3-213ENST00000469939 NT5DC4Q86YG4 428 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms