RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ANKRD45Q5TZF3 282 aa15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 TMED8Q6PL24 325 aaPredicted RBP15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 OGFOD1Q8N543 542 aa15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 DBNDD2Q9BQY9 259 aa15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 DBNLQ9UJU6 430 aaKnown RBP15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 ZNF541Q9H0D2 1346 aa15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 SALL1Q9NSC2 1324 aa15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 COL4A5P29400 1685 aa15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 DDNO94850 711 aaPredicted RBP15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 PHKA1P46020 1223 aa15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 TTC39AQ5SRH9 613 aa15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 SPTY2D1Q68D10 685 aaPredicted RBP15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 MRIQ9BWK5 157 aa15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 CCDC8Q9H0W5 538 aaPredicted RBP15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 GJA3Q9Y6H8 435 aa15.45■□□□□ 0.06
SPTLC1-204ENST00000469778 H7C1D1 291 aa15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 USP17L8P0C7I0 530 aa15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 NUCB1Q02818 461 aa15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 PNMA8AQ86V59 439 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 SPATA5Q8NB90 893 aa15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 GMLQ99445 158 aa15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 GPBP1L1Q9HC44 474 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 KCNQ5Q9NR82 932 aa15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 HDAC9Q9UKV0 1011 aa15.44■□□□□ 0.06
SPTLC1-204ENST00000469778 TTC41PQ6P2S7 1318 aa15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 ATP5JP18859 108 aa15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 GMPSP49915 693 aaPredicted RBP15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 HDLBPQ00341 1268 aaKnown RBP15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 MFSD14BQ5SR56 506 aa15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 CENPQQ7L2Z9 268 aaPredicted RBP15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 HACL1Q9UJ83 578 aa15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 MAST3O60307 1309 aa15.43■□□□□ 0.06
SPTLC1-204ENST00000469778 ERC2O15083 957 aa15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 ZNF280AP59817 542 aaPredicted RBP15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 RASGRF1Q13972 1273 aa15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 CHD1LQ86WJ1 897 aa15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 FBXW7Q969H0 707 aa15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 CCDC136Q96JN2 1154 aa15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 PPP4R2Q9NY27 417 aa15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 CNOT7Q9UIV1 285 aaKnown RBP15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 TIAM2Q8IVF5 1701 aa15.42■□□□□ 0.06
SPTLC1-204ENST00000469778 ARAP2Q8WZ64 1704 aa15.41■□□□□ 0.06
SPTLC1-204ENST00000469778 SCNN1DP51172 638 aa15.41■□□□□ 0.06
SPTLC1-204ENST00000469778 TTF1Q15361 905 aaPredicted RBP15.41■□□□□ 0.06
SPTLC1-204ENST00000469778 USP50Q70EL3 339 aaPredicted RBP15.41■□□□□ 0.06
SPTLC1-204ENST00000469778 SLF2Q8IX21 1173 aa15.41■□□□□ 0.06
SPTLC1-204ENST00000469778 ADARB2Q9NS39 739 aaKnown RBP15.41■□□□□ 0.06
SPTLC1-204ENST00000469778 HMG20BQ9P0W2 317 aa15.41■□□□□ 0.06
SPTLC1-204ENST00000469778 SMARCA5O60264 1052 aaPredicted RBP15.4■□□□□ 0.06
SPTLC1-204ENST00000469778 CHAF1AQ13111 956 aaPredicted RBP15.4■□□□□ 0.06
SPTLC1-204ENST00000469778 TICAM2Q86XR7 235 aa15.4■□□□□ 0.06
SPTLC1-204ENST00000469778 ZC3H15Q8WU90 426 aaKnown RBP15.4■□□□□ 0.06
SPTLC1-204ENST00000469778 STAP2Q9UGK3 403 aa15.4■□□□□ 0.06
SPTLC1-204ENST00000469778 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
SPTLC1-204ENST00000469778 WDR90Q96KV7 1748 aa15.4■□□□□ 0.06
SPTLC1-204ENST00000469778 GLRX3O76003 335 aaKnown RBP15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 LDHBP07195 334 aaKnown RBP15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 EPHX2P34913 555 aa15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 MCAMP43121 646 aa15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 MICALL2Q8IY33 904 aa15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 ZNF784Q8NCA9 323 aaPredicted RBP15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 MTMR14Q8NCE2 650 aa15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 TAF1DQ9H5J8 278 aaPredicted RBP15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 RRAGCQ9HB90 399 aa15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 TLR7Q9NYK1 1049 aaKnown RBP15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 SERPINA10Q9UK55 444 aa15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
SPTLC1-204ENST00000469778 POTECB2RU33 542 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 MX1P20591 662 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 GSTO1P78417 241 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 HHIPL2Q6UWX4 724 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 CERS5Q8N5B7 392 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 HAUS7Q99871 368 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 SCN9AQ15858 1988 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 AOX1Q06278 1338 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 SCN4AP35499 1836 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 PSME4Q14997 1843 aa15.38■□□□□ 0.05
SPTLC1-204ENST00000469778 LDHCP07864 332 aa15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 B4GALNT3Q6L9W6 998 aa15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 KIAA0825Q8IV33 1275 aa15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 C16orf71Q8IYS4 520 aaPredicted RBP15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 FAM163AQ96GL9 167 aaPredicted RBP15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 OSBPL3Q9H4L5 887 aa15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 LRP2BPQ9P2M1 347 aa15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 TTF2Q9UNY4 1162 aaKnown RBP15.37■□□□□ 0.05
SPTLC1-204ENST00000469778 MAP4K4O95819 1239 aaPredicted RBP15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 EPS15P42566 896 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 MAP3K12Q12852 859 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 SCARF1Q14162 830 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 LRRFIP1Q32MZ4 808 aaKnown RBP15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 CERS3Q8IU89 383 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 ZNF526Q8TF50 670 aaPredicted RBP15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 TEKT1Q969V4 418 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 MYOZ2Q9NPC6 264 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms