RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TSGA10IPQ3SY00 556 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 TOGARAM2Q6ZUX3 1019 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 ARFGAP3Q9NP61 516 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 PUF60Q9UHX1 559 aaKnown RBP9.2□□□□□ -0.94
TPM3-215ENST00000469717 HDAC5Q9UQL6 1122 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 KAT6BQ8WYB5 2073 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 ADGRL3Q9HAR2 1447 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 CRYBG1Q9Y4K1 1723 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 GNAT3A8MTJ3 354 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 CTAGE5O15320 804 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 GIGYF1O75420 1035 aaPredicted RBP9.2□□□□□ -0.94
TPM3-215ENST00000469717 TEFQ10587 303 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 CCDC158Q5M9N0 1113 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 PHLPP2Q6ZVD8 1323 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 PRAMEF22A3QJZ6 481 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 MTF1Q14872 753 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 CFAP100Q494V2 611 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 ORAI2Q96SN7 254 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 C9orf78Q9NZ63 289 aaPredicted RBP9.19□□□□□ -0.94
TPM3-215ENST00000469717 IMPACTQ9P2X3 320 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 ADKP55263 362 aaKnown RBP9.19□□□□□ -0.94
TPM3-215ENST00000469717 GPS2Q13227 327 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 ZRSR1Q15695 479 aaKnown RBP9.19□□□□□ -0.94
TPM3-215ENST00000469717 MRPS27Q92552 414 aaKnown RBP9.19□□□□□ -0.94
TPM3-215ENST00000469717 ZSCAN16Q9H4T2 348 aaPredicted RBP9.19□□□□□ -0.94
TPM3-215ENST00000469717 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 PDILTQ8N807 584 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 NAT10Q9H0A0 1025 aaKnown RBP9.19□□□□□ -0.94
TPM3-215ENST00000469717 LGR6Q9HBX8 967 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 PPP2R2CQ9Y2T4 447 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 MED23Q9ULK4 1368 aa9.19□□□□□ -0.94
TPM3-215ENST00000469717 SERPINC1P01008 464 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 PRR29P0C7W0 189 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 MARCKSP29966 332 aaPredicted RBP9.18□□□□□ -0.94
TPM3-215ENST00000469717 UBASH3AP57075 661 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 AXDND1Q5T1B0 1012 aaPredicted RBP9.18□□□□□ -0.94
TPM3-215ENST00000469717 RAPGEF4Q8WZA2 1011 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 FAN1Q9Y2M0 1017 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 NRKQ7Z2Y5 1582 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 ACTN2P35609 894 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 GOLGA5Q8TBA6 731 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 GPATCH3Q96I76 525 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 KAZALD1Q96I82 304 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 INTS13Q9NVM9 706 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 SLC3A2P08195 630 aaKnown RBP9.18□□□□□ -0.94
TPM3-215ENST00000469717 HMGB1P09429 215 aaKnown RBP9.18□□□□□ -0.94
TPM3-215ENST00000469717 MTX1Q13505 466 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 SF3A1Q15459 793 aaKnown RBP9.18□□□□□ -0.94
TPM3-215ENST00000469717 ICE2Q659A1 982 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 TMEM139Q8IV31 216 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 GPATCH11Q8N954 259 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 ZNF622Q969S3 477 aaKnown RBP eCLIP9.18□□□□□ -0.942e-8■■□□□ 13.1
TPM3-215ENST00000469717 PNKPQ96T60 521 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 EFCC1Q9HA90 598 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 MAP3K2Q9Y2U5 619 aa9.18□□□□□ -0.94
TPM3-215ENST00000469717 CHD2O14647 1828 aaKnown RBP9.18□□□□□ -0.94
TPM3-215ENST00000469717 C1orf141Q5JVX7 400 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 ERC1Q8IUD2 1116 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 STK11IPQ8N1F8 1099 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 SMARCC2Q8TAQ2 1214 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 SUCLG2Q96I99 432 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 BICC1Q9H694 974 aaKnown RBP9.17□□□□□ -0.94
TPM3-215ENST00000469717 MROH7-TTC4A0A0A0MT08 1334 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 HSP90AB4PQ58FF6 505 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
TPM3-215ENST00000469717 RSRC2Q7L4I2 434 aaKnown RBP9.17□□□□□ -0.94
TPM3-215ENST00000469717 MRFAP1Q9Y605 127 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 C3P01024 1663 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 ZNF202O95125 648 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 MAP3K9P80192 1104 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 AIMP1Q12904 312 aaKnown RBP9.17□□□□□ -0.94
TPM3-215ENST00000469717 AK7Q96M32 723 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 MRPL44Q9H9J2 332 aaKnown RBP9.17□□□□□ -0.94
TPM3-215ENST00000469717 LZTFL1Q9NQ48 299 aa9.17□□□□□ -0.94
TPM3-215ENST00000469717 PLEKHG2Q9H7P9 1386 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 EIF3CLB5ME19 914 aaKnown RBP9.16□□□□□ -0.94
TPM3-215ENST00000469717 RHOXF2BP0C7M4 288 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 FDPSP14324 419 aaKnown RBP9.16□□□□□ -0.94
TPM3-215ENST00000469717 PNOCQ13519 176 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 STK38Q15208 465 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
TPM3-215ENST00000469717 CCDC12Q8WUD4 166 aaPredicted RBP9.16□□□□□ -0.94
TPM3-215ENST00000469717 EIF3CQ99613 913 aaKnown RBP9.16□□□□□ -0.94
TPM3-215ENST00000469717 RHOXF2Q9BQY4 288 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 FANCLQ9NW38 375 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 AKAP2Q9Y2D5 859 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 CDC27P30260 824 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 MMP14P50281 582 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 EXOC4Q96A65 974 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 KIFC2Q96AC6 838 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 JRKLQ9Y4A0 524 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 MLH3Q9UHC1 1453 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 AGLP35573 1532 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 ABL1P00519 1130 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 EP400NLQ6ZTU2 488 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 KRT28Q7Z3Y7 464 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 OVOS2A0A0J9YW53 1432 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms