RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ASAP3Q8TDY4 903 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 HNRNPLLQ8WVV9 542 aaKnown RBP5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 CRBNQ96SW2 442 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 NT5C1AQ9BXI3 368 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 C11orf16Q9NQ32 467 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 UBP1Q9NZI7 540 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 ATXN7O15265 892 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 TLR3O15455 904 aaKnown RBP5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 TRPA1O75762 1119 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 ITGA6P23229 1130 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 LIG3P49916 1009 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 ANAPC15P60006 121 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 CAMK2GQ13555 558 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 COL9A2Q14055 689 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 PTPROQ16827 1216 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 SEZ6Q53EL9 994 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 TTBK2Q6IQ55 1244 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 CCDC81Q6ZN84 652 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 NLRP8Q86W28 1048 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 PHC3Q8NDX5 983 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 JARID2Q92833 1246 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 ZKSCAN3Q9BRR0 538 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 SRRTQ9BXP5 876 aaKnown RBP5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 ABCB6Q9NP58 842 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 GPN3Q9UHW5 284 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 SALL4Q9UJQ4 1053 aa5.29□□□□□ -1.56
HMGB1P25-201ENST00000468402 DCDC2BA2VCK2 349 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 CELA3AP09093 270 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 NFKB1P19838 968 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 PRPF40BQ6NWY9 871 aaKnown RBP5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 FIGNL1Q6PIW4 674 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 BEND7Q8N7W2 519 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 MKL1Q969V6 931 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 FERD3LQ96RJ6 166 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 POLR3GLQ9BT43 218 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 GSX2Q9BZM3 304 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 SLKQ9H2G2 1235 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 CRISPLD1Q9H336 500 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 IGFLR1Q9H665 355 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 DYRK1BQ9Y463 629 aa5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P25-201ENST00000468402 PPP1R12AO14974 1030 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 ACPPP15309 386 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 SOX9P48436 509 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 ZNF157P51786 506 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 PLAURQ03405 335 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 SERINC3Q13530 473 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 RAB33AQ14088 237 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 SPRED3Q2MJR0 410 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 PLA2G4EQ3MJ16 856 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 CCNJLQ8IV13 435 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 ZCRB1Q8TBF4 217 aaKnown RBP5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 BHMTQ93088 406 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 NSUN5Q96P11 429 aaKnown RBP5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 DEPDC7Q96QD5 511 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 TCF12Q99081 682 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 CWC22Q9HCG8 908 aaKnown RBP5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 ST7Q9NRC1 585 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 PRKAG3Q9UGI9 489 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 PPT2Q9UMR5 302 aa5.27□□□□□ -1.57
HMGB1P25-201ENST00000468402 METTL12A8MUP2 240 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 SMAD7O15105 426 aaKnown RBP5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 ADAM23O75077 832 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 GRIA4P48058 902 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 EIF6P56537 245 aaKnown RBP5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 LMNB2Q03252 620 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 TBC1D8BQ0IIM8 1120 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 IFRD2Q12894 506 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 TNNI3KQ59H18 835 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 SAMD5Q5TGI4 173 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 PCNX4Q63HM2 1172 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 LYPD4Q6UWN0 246 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 FILIP1Q7Z7B0 1213 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 RHOVQ96L33 236 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 SPOCK3Q9BQ16 436 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 MIR1-1HGQ9H1L0 117 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 RRAGCQ9HB90 399 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 SNTG2Q9NY99 539 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 TLR7Q9NYK1 1049 aaKnown RBP5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 ZFATQ9P243 1243 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 SAMM50Q9Y512 469 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 PCDHGC4Q9Y5F7 938 aa5.26□□□□□ -1.57
HMGB1P25-201ENST00000468402 CNTNAP5Q8WYK1 1306 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 A0A096LPE4 126 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 A0A1W2PPZ6 126 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 KLF4O43474 513 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 GREM1O60565 184 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 TRIM37O94972 964 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 BPNT1O95861 308 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 TFE3P19532 575 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 KCNQ4P56696 695 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 MLLT1Q03111 559 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 PPP2R3AQ06190 1150 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 SPEM2Q0P670 501 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 NEUROD1Q13562 356 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 PPP2R5EQ16537 467 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 CWF19L2Q2TBE0 894 aaKnown RBP5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 COL13A1Q5TAT6 717 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 RAB44Q7Z6P3 723 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 NANOS1Q8WY41 292 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms