RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FBXW7Q969H0 707 aa16.81■□□□□ 0.28
UBR4-210ENST00000466969 RPS8P62241 208 aaKnown RBP16.8■□□□□ 0.28
UBR4-210ENST00000466969 SLAIN1Q8ND83 568 aa16.8■□□□□ 0.28
UBR4-210ENST00000466969 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
UBR4-210ENST00000466969 DEFB118Q96PH6 123 aa16.8■□□□□ 0.28
UBR4-210ENST00000466969 SSC5DA1L4H1 1573 aa16.8■□□□□ 0.28
UBR4-210ENST00000466969 USP2O75604 605 aaPredicted RBP16.79■□□□□ 0.28
UBR4-210ENST00000466969 MXD3Q9BW11 206 aa16.79■□□□□ 0.28
UBR4-210ENST00000466969 ARIH1Q9Y4X5 557 aaPredicted RBP16.79■□□□□ 0.28
UBR4-210ENST00000466969 SF3B3Q15393 1217 aaKnown RBP16.78■□□□□ 0.28
UBR4-210ENST00000466969 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
UBR4-210ENST00000466969 HCN4Q9Y3Q4 1203 aa16.78■□□□□ 0.28
UBR4-210ENST00000466969 DACT2Q5SW24 774 aa16.77■□□□□ 0.28
UBR4-210ENST00000466969 ZCCHC17Q9NP64 241 aaKnown RBP16.77■□□□□ 0.28
UBR4-210ENST00000466969 KNSTRNQ9Y448 316 aa16.77■□□□□ 0.28
UBR4-210ENST00000466969 FOSL2P15408 326 aa16.76■□□□□ 0.27
UBR4-210ENST00000466969 CTGFP29279 349 aa16.76■□□□□ 0.27
UBR4-210ENST00000466969 NBPF12Q5TAG4 269 aaPredicted RBP16.76■□□□□ 0.27
UBR4-210ENST00000466969 DIS3LQ8TF46 1054 aaKnown RBP16.76■□□□□ 0.27
UBR4-210ENST00000466969 MYLIPQ8WY64 445 aa16.76■□□□□ 0.27
UBR4-210ENST00000466969 MIS18AQ9NYP9 233 aa16.76■□□□□ 0.27
UBR4-210ENST00000466969 PIEZO1Q92508 2521 aa16.76■□□□□ 0.27
UBR4-210ENST00000466969 STRIP1Q5VSL9 837 aa16.75■□□□□ 0.27
UBR4-210ENST00000466969 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
UBR4-210ENST00000466969 PRKCZQ05513 592 aa16.74■□□□□ 0.27
UBR4-210ENST00000466969 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
UBR4-210ENST00000466969 DLGAP5Q15398 846 aa16.74■□□□□ 0.27
UBR4-210ENST00000466969 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
UBR4-210ENST00000466969 KIAA0825Q8IV33 1275 aa16.74■□□□□ 0.27
UBR4-210ENST00000466969 ZBED3Q96IU2 234 aaPredicted RBP16.74■□□□□ 0.27
UBR4-210ENST00000466969 THUMPD2Q9BTF0 503 aaKnown RBP16.74■□□□□ 0.27
UBR4-210ENST00000466969 SEMA6BQ9H3T3 888 aa16.74■□□□□ 0.27
UBR4-210ENST00000466969 CPA4Q9UI42 421 aa16.74■□□□□ 0.27
UBR4-210ENST00000466969 CETPP11597 493 aa16.73■□□□□ 0.27
UBR4-210ENST00000466969 ANKLE1Q8NAG6 615 aa16.73■□□□□ 0.27
UBR4-210ENST00000466969 C1QTNF1Q9BXJ1 281 aa16.73■□□□□ 0.27
UBR4-210ENST00000466969 CRISPLD2Q9H0B8 497 aa16.73■□□□□ 0.27
UBR4-210ENST00000466969 CDH23Q9H251 3354 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 ZNF804BA4D1E1 1349 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 ADGRA2Q96PE1 1338 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 BTBD19C9JJ37 291 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 MYO1BO43795 1136 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 ADCY3O60266 1144 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 INHAP05111 366 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 PRKAR2BP31323 418 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 ZNF428Q96B54 188 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
UBR4-210ENST00000466969 XDHP47989 1333 aa16.71■□□□□ 0.27
UBR4-210ENST00000466969 MDM2Q00987 491 aaPredicted RBP16.71■□□□□ 0.27
UBR4-210ENST00000466969 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
UBR4-210ENST00000466969 VEZTQ9HBM0 779 aa16.71■□□□□ 0.27
UBR4-210ENST00000466969 PAK6Q9NQU5 681 aaPredicted RBP16.71■□□□□ 0.27
UBR4-210ENST00000466969 CSADQ9Y600 493 aa16.71■□□□□ 0.27
UBR4-210ENST00000466969 COL2A1P02458 1487 aaPredicted RBP16.71■□□□□ 0.27
UBR4-210ENST00000466969 CACNA1AO00555 2505 aa16.71■□□□□ 0.27
UBR4-210ENST00000466969 COL4A1P02462 1669 aa16.71■□□□□ 0.27
UBR4-210ENST00000466969 FCGRTP55899 365 aa16.7■□□□□ 0.26
UBR4-210ENST00000466969 ALYREFQ86V81 257 aaKnown RBP16.7■□□□□ 0.26
UBR4-210ENST00000466969 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
UBR4-210ENST00000466969 EIF4A1P60842 406 aaKnown RBP16.69■□□□□ 0.26
UBR4-210ENST00000466969 VGLL4Q14135 290 aa16.69■□□□□ 0.26
UBR4-210ENST00000466969 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.69■□□□□ 0.26
UBR4-210ENST00000466969 C11orf49Q9H6J7 331 aa16.69■□□□□ 0.26
UBR4-210ENST00000466969 NCOR1O75376 2440 aa16.69■□□□□ 0.26
UBR4-210ENST00000466969 OTOFQ9HC10 1997 aa16.69■□□□□ 0.26
UBR4-210ENST00000466969 CLRN2A0PK11 232 aa16.68■□□□□ 0.26
UBR4-210ENST00000466969 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
UBR4-210ENST00000466969 ELNP15502 786 aa16.68■□□□□ 0.26
UBR4-210ENST00000466969 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
UBR4-210ENST00000466969 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
UBR4-210ENST00000466969 TTLL5Q6EMB2 1281 aa16.68■□□□□ 0.26
UBR4-210ENST00000466969 SNAPC2Q13487 334 aa16.67■□□□□ 0.26
UBR4-210ENST00000466969 RASA3Q14644 834 aa16.67■□□□□ 0.26
UBR4-210ENST00000466969 LRP10Q7Z4F1 713 aa16.67■□□□□ 0.26
UBR4-210ENST00000466969 ADAMTS19Q8TE59 1207 aa16.67■□□□□ 0.26
UBR4-210ENST00000466969 PXYLP1Q8TE99 480 aa16.67■□□□□ 0.26
UBR4-210ENST00000466969 UHRF1Q96T88 793 aaPredicted RBP16.67■□□□□ 0.26
UBR4-210ENST00000466969 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
UBR4-210ENST00000466969 SEC31BQ9NQW1 1179 aa16.67■□□□□ 0.26
UBR4-210ENST00000466969 GABRQQ9UN88 632 aa16.67■□□□□ 0.26
UBR4-210ENST00000466969 MED23Q9ULK4 1368 aa16.66■□□□□ 0.26
UBR4-210ENST00000466969 COPS6Q7L5N1 327 aa16.66■□□□□ 0.26
UBR4-210ENST00000466969 LBHD1Q9BQE6 289 aaPredicted RBP16.66■□□□□ 0.26
UBR4-210ENST00000466969 IRS4O14654 1257 aaPredicted RBP16.65■□□□□ 0.26
UBR4-210ENST00000466969 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
UBR4-210ENST00000466969 MTMR14Q8NCE2 650 aa16.65■□□□□ 0.26
UBR4-210ENST00000466969 ATXN2LQ8WWM7 1075 aaKnown RBP16.65■□□□□ 0.26
UBR4-210ENST00000466969 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBR4-210ENST00000466969 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
UBR4-210ENST00000466969 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
UBR4-210ENST00000466969 ANXA1P04083 346 aa16.64■□□□□ 0.25
UBR4-210ENST00000466969 EIF2S2P20042 333 aaKnown RBP16.64■□□□□ 0.25
UBR4-210ENST00000466969 FLT3LGP49771 235 aa16.64■□□□□ 0.25
UBR4-210ENST00000466969 PDIA6Q15084 440 aa16.64■□□□□ 0.25
UBR4-210ENST00000466969 IL27Q8NEV9 243 aa16.64■□□□□ 0.25
UBR4-210ENST00000466969 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
UBR4-210ENST00000466969 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
UBR4-210ENST00000466969 USP38Q8NB14 1042 aa16.63■□□□□ 0.25
UBR4-210ENST00000466969 XAGE3Q8WTP9 111 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms