RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 POLA2Q14181 598 aa16.01■□□□□ 0.15
COL5A1-206ENST00000465877 RBM26Q5T8P6 1007 aaKnown RBP16.01■□□□□ 0.15
COL5A1-206ENST00000465877 FBXO33Q7Z6M2 555 aa16.01■□□□□ 0.15
COL5A1-206ENST00000465877 GGA3Q9NZ52 723 aa16.01■□□□□ 0.15
COL5A1-206ENST00000465877 CEP126Q9P2H0 1117 aa16.01■□□□□ 0.15
COL5A1-206ENST00000465877 PGAP2Q9UHJ9 254 aa16.01■□□□□ 0.15
COL5A1-206ENST00000465877 FKBP1AP62942 108 aaKnown RBP16■□□□□ 0.15
COL5A1-206ENST00000465877 CEP85Q6P2H3 762 aa16■□□□□ 0.15
COL5A1-206ENST00000465877 OGFOD1Q8N543 542 aa16■□□□□ 0.15
COL5A1-206ENST00000465877 SSH3Q8TE77 659 aa16■□□□□ 0.15
COL5A1-206ENST00000465877 GLIS2Q9BZE0 524 aaPredicted RBP16■□□□□ 0.15
COL5A1-206ENST00000465877 IQSEC3Q9UPP2 1182 aaPredicted RBP16■□□□□ 0.15
COL5A1-206ENST00000465877 ASTN2O75129 1339 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-206ENST00000465877 TRAF5O00463 557 aa15.99■□□□□ 0.15
COL5A1-206ENST00000465877 SASH1O94885 1247 aa15.99■□□□□ 0.15
COL5A1-206ENST00000465877 BCAMP50895 628 aa15.99■□□□□ 0.15
COL5A1-206ENST00000465877 PDE3AQ14432 1141 aa15.99■□□□□ 0.15
COL5A1-206ENST00000465877 C20orf194Q5TEA3 1177 aa15.99■□□□□ 0.15
COL5A1-206ENST00000465877 CREBZFQ9NS37 354 aa15.99■□□□□ 0.15
COL5A1-206ENST00000465877 HDAC9Q9UKV0 1011 aa15.99■□□□□ 0.15
COL5A1-206ENST00000465877 PAPPA2Q9BXP8 1791 aa15.98■□□□□ 0.15
COL5A1-206ENST00000465877 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
COL5A1-206ENST00000465877 FMR1Q06787 632 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL5A1-206ENST00000465877 TFCP2Q12800 502 aa15.98■□□□□ 0.15
COL5A1-206ENST00000465877 MFSD14BQ5SR56 506 aa15.98■□□□□ 0.15
COL5A1-206ENST00000465877 AKAP11Q9UKA4 1901 aa15.98■□□□□ 0.15
COL5A1-206ENST00000465877 MYH2Q9UKX2 1941 aa15.98■□□□□ 0.15
COL5A1-206ENST00000465877 PITPNM2Q9BZ72 1349 aa15.97■□□□□ 0.15
COL5A1-206ENST00000465877 A0A1B0GUL7 405 aa15.97■□□□□ 0.15
COL5A1-206ENST00000465877 TMEM88BA6NKF7 163 aa15.97■□□□□ 0.15
COL5A1-206ENST00000465877 ADM5C9JUS6 153 aa15.97■□□□□ 0.15
COL5A1-206ENST00000465877 F8W031 263 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-206ENST00000465877 FRAT2O75474 233 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-206ENST00000465877 MMP14P50281 582 aa15.97■□□□□ 0.15
COL5A1-206ENST00000465877 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-206ENST00000465877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-206ENST00000465877 MYO5AQ9Y4I1 1855 aaKnown RBP15.97■□□□□ 0.15
COL5A1-206ENST00000465877 DOCK2Q92608 1830 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 WNT10BO00744 389 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 ADORA1P30542 326 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 RRP1P56182 461 aaKnown RBP15.96■□□□□ 0.15
COL5A1-206ENST00000465877 G3BP1Q13283 466 aaKnown RBP eCLIP15.96■□□□□ 0.15
COL5A1-206ENST00000465877 SCARF1Q14162 830 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 NBPF9Q3BBW0 867 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 ANGEL2Q5VTE6 544 aaKnown RBP15.96■□□□□ 0.15
COL5A1-206ENST00000465877 CDC37L1Q7L3B6 337 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 KRT26Q7Z3Y9 468 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 DCPSQ96C86 337 aaKnown RBP15.96■□□□□ 0.15
COL5A1-206ENST00000465877 ZBTB40Q9NUA8 1239 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 AKAP2Q9Y2D5 859 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 OTOFQ9HC10 1997 aa15.96■□□□□ 0.15
COL5A1-206ENST00000465877 PHKA1P46020 1223 aa15.95■□□□□ 0.14
COL5A1-206ENST00000465877 OS9Q13438 667 aaPredicted RBP15.95■□□□□ 0.14
COL5A1-206ENST00000465877 TBC1D22AQ8WUA7 517 aa15.95■□□□□ 0.14
COL5A1-206ENST00000465877 KLRG1Q96E93 195 aa15.95■□□□□ 0.14
COL5A1-206ENST00000465877 CHMP4BQ9H444 224 aaKnown RBP15.95■□□□□ 0.14
COL5A1-206ENST00000465877 CNTNAP1P78357 1384 aa15.95■□□□□ 0.14
COL5A1-206ENST00000465877 SURF6O75683 361 aaKnown RBP15.94■□□□□ 0.14
COL5A1-206ENST00000465877 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
COL5A1-206ENST00000465877 SULF1Q8IWU6 871 aa15.94■□□□□ 0.14
COL5A1-206ENST00000465877 DNAJC5GQ8N7S2 189 aa15.94■□□□□ 0.14
COL5A1-206ENST00000465877 MTMR14Q8NCE2 650 aa15.94■□□□□ 0.14
COL5A1-206ENST00000465877 ZBED3Q96IU2 234 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-206ENST00000465877 TTF2Q9UNY4 1162 aaKnown RBP15.94■□□□□ 0.14
COL5A1-206ENST00000465877 CELF2O95319 508 aaKnown RBP15.93■□□□□ 0.14
COL5A1-206ENST00000465877 CFAP100Q494V2 611 aa15.93■□□□□ 0.14
COL5A1-206ENST00000465877 CCDC102BQ68D86 513 aa15.93■□□□□ 0.14
COL5A1-206ENST00000465877 XAGE2Q96GT9 111 aa15.93■□□□□ 0.14
COL5A1-206ENST00000465877 ZNF408Q9H9D4 720 aa15.93■□□□□ 0.14
COL5A1-206ENST00000465877 GNL3LQ9NVN8 582 aaKnown RBP15.93■□□□□ 0.14
COL5A1-206ENST00000465877 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
COL5A1-206ENST00000465877 PCDHAC2Q9Y5I4 1007 aa15.93■□□□□ 0.14
COL5A1-206ENST00000465877 SPDYE2BA6NHP3 402 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 SEMA3EO15041 775 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 SPDYE6P0CI01 402 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 TIMM10P62072 90 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 DLGAP5Q15398 846 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 GRIK5Q16478 980 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 CST9Q5W186 159 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 DLK2Q6UY11 383 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 APOBEC3FQ8IUX4 373 aaKnown RBP15.92■□□□□ 0.14
COL5A1-206ENST00000465877 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 LAMB1P07942 1786 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 MAST3O60307 1309 aa15.92■□□□□ 0.14
COL5A1-206ENST00000465877 CDK5RAP2Q96SN8 1893 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 ZBTB22O15209 634 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 HMMRO75330 724 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 RASGRF1Q13972 1273 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 TNNI3KQ59H18 835 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 RPAP2Q8IXW5 612 aaPredicted RBP15.91■□□□□ 0.14
COL5A1-206ENST00000465877 WDR66Q8TBY9 1149 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 CDCA5Q96FF9 252 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 GPR108Q9NPR9 543 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 MKRN1Q9UHC7 482 aaKnown RBP15.91■□□□□ 0.14
COL5A1-206ENST00000465877 SERPINA10Q9UK55 444 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 DENND2AQ9ULE3 1009 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 ABT1Q9ULW3 272 aaKnown RBP15.91■□□□□ 0.14
COL5A1-206ENST00000465877 SCAF8Q9UPN6 1271 aaKnown RBP15.91■□□□□ 0.14
COL5A1-206ENST00000465877 EXOC6BQ9Y2D4 811 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 FPGT-TNNI3KV9GXZ4 949 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 477.9 ms