RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 WNK4Q96J92 1243 aa20.09■□□□□ 0.81
SND1-203ENST00000463020 ANKRD2Q9GZV1 360 aa20.09■□□□□ 0.81
SND1-203ENST00000463020 COL1A1P02452 1464 aaPredicted RBP20.08■□□□□ 0.81
SND1-203ENST00000463020 ZNF316A6NFI3 1004 aaPredicted RBP20.08■□□□□ 0.81
SND1-203ENST00000463020 FOXO4P98177 505 aa20.08■□□□□ 0.81
SND1-203ENST00000463020 MAP3K11Q16584 847 aa20.08■□□□□ 0.81
SND1-203ENST00000463020 WWC1Q8IX03 1113 aa20.08■□□□□ 0.81
SND1-203ENST00000463020 PRMT6Q96LA8 375 aaPredicted RBP20.08■□□□□ 0.81
SND1-203ENST00000463020 MPHOSPH8Q99549 860 aa20.08■□□□□ 0.81
SND1-203ENST00000463020 LAMB1P07942 1786 aa20.08■□□□□ 0.8
SND1-203ENST00000463020 KCNJ4P48050 445 aa20.07■□□□□ 0.8
SND1-203ENST00000463020 DLGAP5Q15398 846 aa20.07■□□□□ 0.8
SND1-203ENST00000463020 CFAP100Q494V2 611 aa20.07■□□□□ 0.8
SND1-203ENST00000463020 EPHA10Q5JZY3 1008 aa20.07■□□□□ 0.8
SND1-203ENST00000463020 NBPF12Q5TAG4 269 aaPredicted RBP20.07■□□□□ 0.8
SND1-203ENST00000463020 OTOP1Q7RTM1 612 aa20.07■□□□□ 0.8
SND1-203ENST00000463020 CDAN1Q8IWY9 1227 aa20.07■□□□□ 0.8
SND1-203ENST00000463020 SPDYE2BA6NHP3 402 aa20.06■□□□□ 0.8
SND1-203ENST00000463020 SPDYE6P0CI01 402 aa20.06■□□□□ 0.8
SND1-203ENST00000463020 MTMR14Q8NCE2 650 aa20.06■□□□□ 0.8
SND1-203ENST00000463020 DNAAF4Q8WXU2 420 aa20.06■□□□□ 0.8
SND1-203ENST00000463020 SLC10A4Q96EP9 437 aa20.06■□□□□ 0.8
SND1-203ENST00000463020 ZNF594Q96JF6 807 aaPredicted RBP20.06■□□□□ 0.8
SND1-203ENST00000463020 PTPN18Q99952 460 aa20.06■□□□□ 0.8
SND1-203ENST00000463020 TRIM17Q9Y577 477 aa20.06■□□□□ 0.8
SND1-203ENST00000463020 ECM29Q5VYK3 1845 aa20.06■□□□□ 0.8
SND1-203ENST00000463020 OTOFQ9HC10 1997 aa20.05■□□□□ 0.8
SND1-203ENST00000463020 F6X3S4 739 aa20.05■□□□□ 0.8
SND1-203ENST00000463020 C15orf52Q6ZUT6 534 aaKnown RBP20.05■□□□□ 0.8
SND1-203ENST00000463020 MANSC4A6NHS7 340 aaPredicted RBP20.04■□□□□ 0.8
SND1-203ENST00000463020 USP2O75604 605 aaPredicted RBP20.04■□□□□ 0.8
SND1-203ENST00000463020 IL1R1P14778 569 aa20.04■□□□□ 0.8
SND1-203ENST00000463020 CRHR2Q13324 411 aa20.04■□□□□ 0.8
SND1-203ENST00000463020 FKBP5Q13451 457 aaPredicted RBP20.04■□□□□ 0.8
SND1-203ENST00000463020 LINS1Q8NG48 757 aa20.04■□□□□ 0.8
SND1-203ENST00000463020 CD99L2Q8TCZ2 262 aa20.04■□□□□ 0.8
SND1-203ENST00000463020 VEZTQ9HBM0 779 aa20.04■□□□□ 0.8
SND1-203ENST00000463020 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
SND1-203ENST00000463020 ANKRD18BA2A2Z9 1011 aa20.03■□□□□ 0.8
SND1-203ENST00000463020 MMP14P50281 582 aa20.03■□□□□ 0.8
SND1-203ENST00000463020 CNKSR2Q8WXI2 1034 aa20.03■□□□□ 0.8
SND1-203ENST00000463020 ZBTB48P10074 688 aaPredicted RBP20.02■□□□□ 0.8
SND1-203ENST00000463020 CCDC27Q2M243 656 aa20.02■□□□□ 0.8
SND1-203ENST00000463020 VAMP4O75379 141 aa20.01■□□□□ 0.79
SND1-203ENST00000463020 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
SND1-203ENST00000463020 RASA3Q14644 834 aa20.01■□□□□ 0.79
SND1-203ENST00000463020 BEND3Q5T5X7 828 aa20.01■□□□□ 0.79
SND1-203ENST00000463020 CHMP4AQ9BY43 222 aa20.01■□□□□ 0.79
SND1-203ENST00000463020 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
SND1-203ENST00000463020 CHMP3Q9Y3E7 222 aa20.01■□□□□ 0.79
SND1-203ENST00000463020 PLIN1O60240 522 aa20■□□□□ 0.79
SND1-203ENST00000463020 GRIK5Q16478 980 aa20■□□□□ 0.79
SND1-203ENST00000463020 DIEXFQ68CQ4 756 aaKnown RBP20■□□□□ 0.79
SND1-203ENST00000463020 LMBR1LQ6UX01 489 aa20■□□□□ 0.79
SND1-203ENST00000463020 ELP3Q9H9T3 547 aa20■□□□□ 0.79
SND1-203ENST00000463020 PTPN22Q9Y2R2 807 aa20■□□□□ 0.79
SND1-203ENST00000463020 PPP2R3BQ9Y5P8 575 aa20■□□□□ 0.79
SND1-203ENST00000463020 PPP1R12BO60237 982 aaPredicted RBP19.99■□□□□ 0.79
SND1-203ENST00000463020 IFIT5Q13325 482 aaKnown RBP19.99■□□□□ 0.79
SND1-203ENST00000463020 ZNF804AQ7Z570 1209 aa19.99■□□□□ 0.79
SND1-203ENST00000463020 TEPSINQ96N21 525 aa19.99■□□□□ 0.79
SND1-203ENST00000463020 SPINK5Q9NQ38 1064 aaPredicted RBP19.99■□□□□ 0.79
SND1-203ENST00000463020 EN2P19622 333 aaPredicted RBP19.98■□□□□ 0.79
SND1-203ENST00000463020 INHBEP58166 350 aa19.98■□□□□ 0.79
SND1-203ENST00000463020 MS4A4AQ96JQ5 239 aa19.98■□□□□ 0.79
SND1-203ENST00000463020 ZNF70Q9UC06 446 aaPredicted RBP19.98■□□□□ 0.79
SND1-203ENST00000463020 IL16Q14005 1332 aa19.98■□□□□ 0.79
SND1-203ENST00000463020 RBBP6Q7Z6E9 1792 aaKnown RBP19.98■□□□□ 0.79
SND1-203ENST00000463020 TESPA1A2RU30 521 aaPredicted RBP19.97■□□□□ 0.79
SND1-203ENST00000463020 GYG1P46976 350 aa19.97■□□□□ 0.79
SND1-203ENST00000463020 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
SND1-203ENST00000463020 FKBP1AP62942 108 aaKnown RBP19.97■□□□□ 0.79
SND1-203ENST00000463020 EXOSC9Q06265 439 aaKnown RBP19.97■□□□□ 0.79
SND1-203ENST00000463020 SUPT20HL1Q3ZLR7 823 aa19.97■□□□□ 0.79
SND1-203ENST00000463020 SPDYE2Q495Y8 402 aa19.97■□□□□ 0.79
SND1-203ENST00000463020 OPTNQ96CV9 577 aa19.97■□□□□ 0.79
SND1-203ENST00000463020 PUS3Q9BZE2 481 aaKnown RBP19.97■□□□□ 0.79
SND1-203ENST00000463020 TDRD3Q9H7E2 651 aaKnown RBP19.97■□□□□ 0.79
SND1-203ENST00000463020 SALL2Q9Y467 1007 aaPredicted RBP19.97■□□□□ 0.79
SND1-203ENST00000463020 ZSWIM8A7E2V4 1837 aa19.97■□□□□ 0.79
SND1-203ENST00000463020 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.96■□□□□ 0.79
SND1-203ENST00000463020 BRI3BPQ8WY22 251 aa19.96■□□□□ 0.79
SND1-203ENST00000463020 TMEM39BQ9GZU3 492 aa19.96■□□□□ 0.79
SND1-203ENST00000463020 FAM205AQ6ZU69 1335 aa19.96■□□□□ 0.79
SND1-203ENST00000463020 KIAA0100Q14667 2235 aaKnown RBP19.95■□□□□ 0.78
SND1-203ENST00000463020 MYO1BO43795 1136 aa19.95■□□□□ 0.78
SND1-203ENST00000463020 IREB2P48200 963 aaKnown RBP19.95■□□□□ 0.78
SND1-203ENST00000463020 HABP4Q5JVS0 413 aaKnown RBP19.95■□□□□ 0.78
SND1-203ENST00000463020 ANKRD13AQ8IZ07 590 aa19.95■□□□□ 0.78
SND1-203ENST00000463020 TDRD7Q8NHU6 1098 aaKnown RBP19.95■□□□□ 0.78
SND1-203ENST00000463020 ARMC5Q96C12 935 aa19.95■□□□□ 0.78
SND1-203ENST00000463020 KAZALD1Q96I82 304 aa19.95■□□□□ 0.78
SND1-203ENST00000463020 ARAP2Q8WZ64 1704 aa19.95■□□□□ 0.78
SND1-203ENST00000463020 TCP10L2B9ZVM9 353 aa19.94■□□□□ 0.78
SND1-203ENST00000463020 MFSD14BQ5SR56 506 aa19.94■□□□□ 0.78
SND1-203ENST00000463020 LDHAL6AQ6ZMR3 332 aa19.94■□□□□ 0.78
SND1-203ENST00000463020 ERO1AQ96HE7 468 aa19.94■□□□□ 0.78
SND1-203ENST00000463020 FAM84BQ96KN1 310 aaPredicted RBP19.94■□□□□ 0.78
SND1-203ENST00000463020 EFCC1Q9HA90 598 aa19.94■□□□□ 0.78
SND1-203ENST00000463020 TTF2Q9UNY4 1162 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms