RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
COL18A1-206ENST00000459895 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
COL18A1-206ENST00000459895 NEUROD6Q96NK8 337 aa15.8■□□□□ 0.12
COL18A1-206ENST00000459895 HACL1Q9UJ83 578 aa15.8■□□□□ 0.12
COL18A1-206ENST00000459895 MYO3BQ8WXR4 1341 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 IQCA1LA6NCM1 817 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 RAB11FIP3O75154 756 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 RPS12P25398 132 aaKnown RBP15.79■□□□□ 0.12
COL18A1-206ENST00000459895 LMOD1P29536 600 aaPredicted RBP15.79■□□□□ 0.12
COL18A1-206ENST00000459895 EPS15P42566 896 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 HDAC1Q13547 482 aaPredicted RBP15.79■□□□□ 0.12
COL18A1-206ENST00000459895 RASGRF1Q13972 1273 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 AACSQ86V21 672 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 TRPM4Q8TD43 1214 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 GMLQ99445 158 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 TAF1DQ9H5J8 278 aaPredicted RBP15.79■□□□□ 0.12
COL18A1-206ENST00000459895 DCTPP1Q9H773 170 aa15.79■□□□□ 0.12
COL18A1-206ENST00000459895 SMARCA5O60264 1052 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-206ENST00000459895 POTEIP0CG38 1075 aa15.78■□□□□ 0.12
COL18A1-206ENST00000459895 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
COL18A1-206ENST00000459895 ARID4AP29374 1257 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-206ENST00000459895 EPHX2P34913 555 aa15.78■□□□□ 0.12
COL18A1-206ENST00000459895 SCARF1Q14162 830 aa15.78■□□□□ 0.12
COL18A1-206ENST00000459895 TTLL5Q6EMB2 1281 aa15.78■□□□□ 0.12
COL18A1-206ENST00000459895 PI16Q6UXB8 463 aa15.78■□□□□ 0.12
COL18A1-206ENST00000459895 LRRCC1Q9C099 1032 aa15.78■□□□□ 0.12
COL18A1-206ENST00000459895 CCDC8Q9H0W5 538 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-206ENST00000459895 MYH7P12883 1935 aa15.78■□□□□ 0.12
COL18A1-206ENST00000459895 FRAT2O75474 233 aaPredicted RBP15.77■□□□□ 0.12
COL18A1-206ENST00000459895 EGFRP00533 1210 aa15.77■□□□□ 0.12
COL18A1-206ENST00000459895 VEGFAP15692 232 aaPredicted RBP15.77■□□□□ 0.12
COL18A1-206ENST00000459895 MFSD14BQ5SR56 506 aa15.77■□□□□ 0.12
COL18A1-206ENST00000459895 KIAA0825Q8IV33 1275 aa15.77■□□□□ 0.12
COL18A1-206ENST00000459895 AGBL3Q8NEM8 1001 aa15.77■□□□□ 0.12
COL18A1-206ENST00000459895 BCL11AQ9H165 835 aa15.77■□□□□ 0.12
COL18A1-206ENST00000459895 PDS5AQ29RF7 1337 aaKnown RBP15.76■□□□□ 0.11
COL18A1-206ENST00000459895 MCAMP43121 646 aa15.76■□□□□ 0.11
COL18A1-206ENST00000459895 GRIK5Q16478 980 aa15.76■□□□□ 0.11
COL18A1-206ENST00000459895 GORABQ5T7V8 394 aa15.76■□□□□ 0.11
COL18A1-206ENST00000459895 DPF2Q92785 391 aa15.76■□□□□ 0.11
COL18A1-206ENST00000459895 MYH2Q9UKX2 1941 aa15.76■□□□□ 0.11
COL18A1-206ENST00000459895 F8W031 263 aaPredicted RBP15.75■□□□□ 0.11
COL18A1-206ENST00000459895 SEMA3EO15041 775 aa15.75■□□□□ 0.11
COL18A1-206ENST00000459895 ZNF280AP59817 542 aaPredicted RBP15.75■□□□□ 0.11
COL18A1-206ENST00000459895 FKBP1AP62942 108 aaKnown RBP15.75■□□□□ 0.11
COL18A1-206ENST00000459895 KIF4BQ2VIQ3 1234 aa15.75■□□□□ 0.11
COL18A1-206ENST00000459895 EAPPQ56P03 285 aaPredicted RBP15.75■□□□□ 0.11
COL18A1-206ENST00000459895 TTC39AQ5SRH9 613 aa15.75■□□□□ 0.11
COL18A1-206ENST00000459895 CLASRPQ8N2M8 674 aaKnown RBP15.75■□□□□ 0.11
COL18A1-206ENST00000459895 ADARB2Q9NS39 739 aaKnown RBP15.75■□□□□ 0.11
COL18A1-206ENST00000459895 GNL3LQ9NVN8 582 aaKnown RBP15.75■□□□□ 0.11
COL18A1-206ENST00000459895 CNOT7Q9UIV1 285 aaKnown RBP15.75■□□□□ 0.11
COL18A1-206ENST00000459895 ZBTB22O15209 634 aa15.74■□□□□ 0.11
COL18A1-206ENST00000459895 IGHDP01880 384 aa15.74■□□□□ 0.11
COL18A1-206ENST00000459895 USP17L8P0C7I0 530 aa15.74■□□□□ 0.11
COL18A1-206ENST00000459895 TBC1D10BQ4KMP7 808 aaPredicted RBP15.74■□□□□ 0.11
COL18A1-206ENST00000459895 SAMD7Q7Z3H4 446 aa15.74■□□□□ 0.11
COL18A1-206ENST00000459895 HMG20BQ9P0W2 317 aa15.74■□□□□ 0.11
COL18A1-206ENST00000459895 DENND2AQ9ULE3 1009 aa15.74■□□□□ 0.11
COL18A1-206ENST00000459895 CDK5RAP2Q96SN8 1893 aa15.74■□□□□ 0.11
COL18A1-206ENST00000459895 SALL1Q9NSC2 1324 aa15.73■□□□□ 0.11
COL18A1-206ENST00000459895 IFIT2P09913 472 aaKnown RBP15.73■□□□□ 0.11
COL18A1-206ENST00000459895 PRDX5P30044 214 aa15.73■□□□□ 0.11
COL18A1-206ENST00000459895 TBC1D22AQ8WUA7 517 aa15.73■□□□□ 0.11
COL18A1-206ENST00000459895 FOCADQ5VW36 1801 aa15.73■□□□□ 0.11
COL18A1-206ENST00000459895 ASTN2O75129 1339 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-206ENST00000459895 TRPM7Q96QT4 1865 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 UQCRFS1P1P0C7P4 283 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 HIRAP54198 1017 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-206ENST00000459895 CCDC158Q5M9N0 1113 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-206ENST00000459895 SPATA5Q8NB90 893 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 WDR66Q8TBY9 1149 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 OTUD7AQ8TE49 926 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-206ENST00000459895 GCC1Q96CN9 775 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 MYOZ2Q9NPC6 264 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 PCDHAC2Q9Y5I4 1007 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 NDUFB9Q9Y6M9 179 aa15.72■□□□□ 0.11
COL18A1-206ENST00000459895 DDX60LQ5H9U9 1706 aaKnown RBP15.71■□□□□ 0.11
COL18A1-206ENST00000459895 AOX1Q06278 1338 aa15.71■□□□□ 0.11
COL18A1-206ENST00000459895 H7C1D1 291 aa15.71■□□□□ 0.11
COL18A1-206ENST00000459895 TSHZ3Q63HK5 1081 aa15.71■□□□□ 0.11
COL18A1-206ENST00000459895 USP50Q70EL3 339 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-206ENST00000459895 LDHDQ86WU2 507 aa15.71■□□□□ 0.11
COL18A1-206ENST00000459895 ZNF512BQ96KM6 892 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-206ENST00000459895 RWDD1Q9H446 243 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-206ENST00000459895 SNRKQ9NRH2 765 aa15.71■□□□□ 0.11
COL18A1-206ENST00000459895 TTF2Q9UNY4 1162 aaKnown RBP15.71■□□□□ 0.11
COL18A1-206ENST00000459895 SALL3Q9BXA9 1300 aa15.7■□□□□ 0.1
COL18A1-206ENST00000459895 AK9Q5TCS8 1911 aa15.7■□□□□ 0.1
COL18A1-206ENST00000459895 PAPPA2Q9BXP8 1791 aa15.7■□□□□ 0.1
COL18A1-206ENST00000459895 NEFLP07196 543 aa15.7■□□□□ 0.1
COL18A1-206ENST00000459895 PNMA8AQ86V59 439 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-206ENST00000459895 GGA3Q9NZ52 723 aa15.7■□□□□ 0.1
COL18A1-206ENST00000459895 MAST3O60307 1309 aa15.69■□□□□ 0.1
COL18A1-206ENST00000459895 NAV1Q8NEY1 1877 aa15.69■□□□□ 0.1
COL18A1-206ENST00000459895 TOMM70O94826 608 aa15.69■□□□□ 0.1
COL18A1-206ENST00000459895 ZAP70P43403 619 aa15.69■□□□□ 0.1
COL18A1-206ENST00000459895 RBM26Q5T8P6 1007 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms