RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 PHRF1Q9P1Y6 1649 aaKnown RBP11.18□□□□□ -0.62
UFD1-205ENST00000459854 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 MX1P20591 662 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 POLD1P28340 1107 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 FLIIQ13045 1269 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
UFD1-205ENST00000459854 DZIP3Q86Y13 1208 aaKnown RBP11.18□□□□□ -0.62
UFD1-205ENST00000459854 CEP83Q9Y592 693 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 SPECC1Q5M775 1068 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 BICDL1Q6ZP65 573 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.18□□□□□ -0.62
UFD1-205ENST00000459854 VPS37DQ86XT2 251 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 CCDC155Q8N6L0 562 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 NEUROD6Q96NK8 337 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 CTAGE1Q96RT6 745 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 CCDC69A6NI79 296 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 FAM177BA6PVY3 158 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 GNG11P61952 73 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 SSH1Q8WYL5 1049 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 ZSCAN16Q9H4T2 348 aaPredicted RBP11.18□□□□□ -0.62
UFD1-205ENST00000459854 PPP1R12BO60237 982 aaPredicted RBP11.17□□□□□ -0.62
UFD1-205ENST00000459854 GIGYF1O75420 1035 aaPredicted RBP11.17□□□□□ -0.62
UFD1-205ENST00000459854 HDXQ7Z353 690 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 MYRIPQ8NFW9 859 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 MYCBPQ99417 103 aaPredicted RBP11.17□□□□□ -0.62
UFD1-205ENST00000459854 RAI14Q9P0K7 980 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.17□□□□□ -0.625e-7■□□□□ 9.8
UFD1-205ENST00000459854 RARSP54136 660 aaKnown RBP11.17□□□□□ -0.62
UFD1-205ENST00000459854 CCDC158Q5M9N0 1113 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 TMC6Q7Z403 805 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 DNAJC21Q5F1R6 531 aaKnown RBP11.17□□□□□ -0.62
UFD1-205ENST00000459854 PPP1R42Q7Z4L9 355 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 CCDC12Q8WUD4 166 aaPredicted RBP11.17□□□□□ -0.62
UFD1-205ENST00000459854 ZBTB3Q9H5J0 574 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 ATG3Q9NT62 314 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 LRP6O75581 1613 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 KCNQ2O43526 872 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 XAGE3Q8WTP9 111 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 TSG101Q99816 390 aa11.17□□□□□ -0.62
UFD1-205ENST00000459854 CCDC6Q16204 474 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 COPS6Q7L5N1 327 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 FBF1Q8TES7 1133 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 TRMT1Q9NXH9 659 aaKnown RBP11.16□□□□□ -0.62
UFD1-205ENST00000459854 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 GLRX3O76003 335 aaKnown RBP11.16□□□□□ -0.62
UFD1-205ENST00000459854 SKILP12757 684 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 ARHGAP25P42331 645 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 PPP1R1BQ9UD71 204 aaPredicted RBP11.16□□□□□ -0.62
UFD1-205ENST00000459854 LTN1O94822 1766 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 VAMP4O75379 141 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 CAMK4Q16566 473 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 SETDB2Q96T68 719 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 STX6O43752 255 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 ANAPC15P60006 121 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 SPAG1Q07617 926 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
UFD1-205ENST00000459854 CASTP20810 708 aaKnown RBP11.15□□□□□ -0.62
UFD1-205ENST00000459854 MAATS1Q7Z4T9 603 aa11.15□□□□□ -0.62
UFD1-205ENST00000459854 COL22A1Q8NFW1 1626 aaPredicted RBP11.15□□□□□ -0.62
UFD1-205ENST00000459854 ZFYP08048 801 aaPredicted RBP11.15□□□□□ -0.62
UFD1-205ENST00000459854 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
UFD1-205ENST00000459854 LMNTD2Q8IXW0 634 aa11.15□□□□□ -0.62
UFD1-205ENST00000459854 MYD88Q99836 296 aa11.15□□□□□ -0.62
UFD1-205ENST00000459854 KCNQ3O43525 872 aa11.15□□□□□ -0.62
UFD1-205ENST00000459854 CCDC129Q6ZRS4 1044 aa11.15□□□□□ -0.63
UFD1-205ENST00000459854 SPATS2Q86XZ4 545 aaKnown RBP11.15□□□□□ -0.63
UFD1-205ENST00000459854 NUP88Q99567 741 aaPredicted RBP11.15□□□□□ -0.63
UFD1-205ENST00000459854 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 CRKLP46109 303 aaKnown RBP11.14□□□□□ -0.63
UFD1-205ENST00000459854 HOOK3Q86VS8 718 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 CCDC113Q9H0I3 377 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
UFD1-205ENST00000459854 A1BGP04217 495 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 KSR2Q6VAB6 950 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 C10orf67Q8IYJ2 551 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 MIPOL1Q8TD10 442 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 ARHGAP45Q92619 1136 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 IFT74Q96LB3 600 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 NYXQ9GZU5 481 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 PARP3Q9Y6F1 533 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
UFD1-205ENST00000459854 ZNF853P0CG23 659 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 IL6STP40189 918 aaPredicted RBP11.14□□□□□ -0.63
UFD1-205ENST00000459854 ST5P78524 1137 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 KRT24Q2M2I5 525 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 CCDC114Q96M63 670 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 MAP3K2Q9Y2U5 619 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
UFD1-205ENST00000459854 LACTBP83111 547 aaPredicted RBP11.14□□□□□ -0.63
UFD1-205ENST00000459854 STK3Q13188 491 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 TSPYL6Q8N831 410 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
UFD1-205ENST00000459854 TRMT112Q9UI30 125 aaKnown RBP11.14□□□□□ -0.63
UFD1-205ENST00000459854 FSD2A1L4K1 749 aa11.13□□□□□ -0.63
UFD1-205ENST00000459854 PI4KAP2A4QPH2 592 aa11.13□□□□□ -0.63
UFD1-205ENST00000459854 ANXA1P04083 346 aa11.13□□□□□ -0.63
UFD1-205ENST00000459854 ATP2B1P20020 1258 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms