RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 PDIA3P30101 505 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 KCNJ6P48051 423 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCT2P78371 535 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 EXOSC10Q01780 885 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 NCBP1Q09161 790 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 LRMPQ12912 555 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 IQCB1Q15051 598 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 SAFBQ15424 915 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 SLFNL1Q499Z3 407 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 EPHA10Q5JZY3 1008 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 KIF6Q6ZMV9 814 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 C11orf57Q6ZUT1 292 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF771Q7L3S4 317 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 HOMER1Q86YM7 354 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCAR2Q8N163 923 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 NFATC2IPQ8NCF5 419 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 MNS1Q8NEH6 495 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 CACTINQ8WUQ7 758 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 EDC3Q96F86 508 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 TIGD1Q96MW7 591 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 USP28Q96RU2 1077 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 SRRTQ9BXP5 876 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 LRRC2Q9BYS8 371 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 AGXT2Q9BYV1 514 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 OSBPL5Q9H0X9 879 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 PRDM10Q9NQV6 1147 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 KCND1Q9NSA2 647 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 ORC3Q9UBD5 711 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 TBC1D2BQ9UPU7 963 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC9Q9Y3X0 531 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 USP16Q9Y5T5 823 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 ALS2Q96Q42 1657 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 MAST3O60307 1309 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 SALL1Q9NSC2 1324 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 LAMA4Q16363 1823 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 DCCP43146 1447 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 TNS3Q68CZ2 1445 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 MEGF6O75095 1541 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 NUP188Q5SRE5 1749 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 RGPD5Q99666 1765 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 A0A1B0GUL7 405 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 ERVV-2B6SEH9 535 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF213O14771 459 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 SERPINC1P01008 464 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 UQCRFS1P1P0C7P4 283 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 CMA1P23946 247 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 U2AF2P26368 475 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 SYKP43405 635 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 METAP2P50579 478 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 CASP7P55210 303 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 EVCP57679 992 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZC3H6P61129 1189 aaKnown RBP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 MYL5Q02045 173 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 GUCY1B3Q02153 619 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 FKBP4Q02790 459 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 BMS1Q14692 1282 aaKnown RBP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 SART3Q15020 963 aaKnown RBP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 HSP90AB3PQ58FF7 597 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 TEX35Q5T0J7 233 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 MYSM1Q5VVJ2 828 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 ANO1Q5XXA6 986 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 NFXL1Q6ZNB6 911 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 NYAP1Q6ZVC0 841 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 STOX1Q6ZVD7 989 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 TMC6Q7Z403 805 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 FCHSD1Q86WN1 690 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 DHX40Q8IX18 779 aaKnown RBP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 TRIM22Q8IYM9 498 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 FMR1NBQ8N0W7 255 aaPredicted RBP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 LINC00301Q8NCQ3 95 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 ENGASEQ8NFI3 743 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 TSC1Q92574 1164 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 APPBP2Q92624 585 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 TMEM87BQ96K49 555 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 ORAI2Q96SN7 254 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 SEC62Q99442 399 aaKnown RBP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 TEX13AQ9BXU3 409 aaPredicted RBP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 BCL11BQ9C0K0 894 aaPredicted RBP3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 GOLPH3LQ9H4A5 285 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 C19orf44Q9H6X5 657 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 CNNM2Q9H8M5 875 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 KIAA1468Q9P260 1216 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 NRBP1Q9UHY1 535 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 PCDHA7Q9UN72 937 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 CEP131Q9UPN4 1083 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 TAF6LQ9Y6J9 622 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZMYM6O95789 1325 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 MAP3K15Q6ZN16 1313 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 PHLPP2Q6ZVD8 1323 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 CPDO75976 1380 aa3.85□□□□□ -1.79
HMGN1P18-201ENST00000457642 MYH7P12883 1935 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC196A0A1B0GTZ2 297 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 A0A1B0GVL5 298 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ERICH2A1L162 156 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 SPDYE4A6NLX3 237 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 GOLGA8AA7E2F4 631 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 M0R2C6 588 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZBTB43O43298 467 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CUTAO60888 179 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 PPP6R2O75170 966 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms