RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 KIAA1958Q8N8K9 716 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 ACRBPQ8NEB7 543 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 APBA2Q99767 749 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 LAMB4A4D0S4 1761 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 PAPPAQ13219 1627 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 RGS12O14924 1447 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 H3BRB1 525 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 CHCHD4Q8N4Q1 142 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 TMUB1Q9BVT8 246 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 TUT1Q9H6E5 874 aaKnown RBP9.31□□□□□ -0.92
BRCC3-208ENST00000453705 MRPS23Q9Y3D9 190 aaKnown RBP9.31□□□□□ -0.92
BRCC3-208ENST00000453705 BICDL2A1A5D9 508 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 PRR29P0C7W0 189 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 INO80DQ53TQ3 878 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-208ENST00000453705 ATF7IPQ6VMQ6 1270 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 MRPL50Q8N5N7 158 aaKnown RBP9.31□□□□□ -0.92
BRCC3-208ENST00000453705 CCDC47Q96A33 483 aaKnown RBP9.31□□□□□ -0.92
BRCC3-208ENST00000453705 ALG2Q9H553 416 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 EVLQ9UI08 416 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-208ENST00000453705 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-208ENST00000453705 MAP3K5Q99683 1374 aa9.31□□□□□ -0.92
BRCC3-208ENST00000453705 K7ELQ4 463 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-208ENST00000453705 NLRP6P59044 892 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 HSP90AA2PQ14568 343 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-208ENST00000453705 ZCCHC8Q6NZY4 707 aaKnown RBP9.3□□□□□ -0.92
BRCC3-208ENST00000453705 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 RNF217Q8TC41 542 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 SSH1Q8WYL5 1049 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 ORAI2Q96SN7 254 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 RETREG1Q9H6L5 497 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 DDX19BQ9UMR2 479 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 SHANK3Q9BYB0 1731 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
BRCC3-208ENST00000453705 SULT6B1Q6IMI4 303 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 PDXDC1Q6P996 788 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 RELL1Q8IUW5 271 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 DZIP1LQ8IYY4 767 aaKnown RBP9.3□□□□□ -0.92
BRCC3-208ENST00000453705 MYRIPQ8NFW9 859 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 EYA1Q99502 592 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 CREBZFQ9NS37 354 aa9.3□□□□□ -0.92
BRCC3-208ENST00000453705 NOVA2Q9UNW9 492 aaKnown RBP9.3□□□□□ -0.92
BRCC3-208ENST00000453705 DNAJC21Q5F1R6 531 aaKnown RBP9.29□□□□□ -0.92
BRCC3-208ENST00000453705 VPS37AQ8NEZ2 397 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 FBXO22Q8NEZ5 403 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 CLIC5Q9NZA1 410 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 TAGLN3Q9UI15 199 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 AKAP2Q9Y2D5 859 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 TUBGCP6Q96RT7 1819 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 TRAPPC10P48553 1259 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 QPCTQ16769 361 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 TAS1R3Q7RTX0 852 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 FAM43AQ8N2R8 423 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 CCDC89Q8N998 374 aa9.29□□□□□ -0.92
BRCC3-208ENST00000453705 HMX1Q9NP08 348 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-208ENST00000453705 P4HBP07237 508 aaKnown RBP9.28□□□□□ -0.92
BRCC3-208ENST00000453705 HSP90AA1P07900 732 aaKnown RBP9.28□□□□□ -0.92
BRCC3-208ENST00000453705 HMOX1P09601 288 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 HCLS1P14317 486 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-208ENST00000453705 FBLN1P23142 703 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 GJD4Q96KN9 370 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-208ENST00000453705 TGIF2Q9GZN2 237 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 DNAJC25Q9H1X3 360 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 PTPRCP08575 1304 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 NPHP3Q7Z494 1330 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 PES1O00541 588 aaKnown RBP9.28□□□□□ -0.92
BRCC3-208ENST00000453705 HOXB7P09629 217 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 AMPHP49418 695 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 ZC3H12AQ5D1E8 599 aaKnown RBP9.28□□□□□ -0.92
BRCC3-208ENST00000453705 HELQQ8TDG4 1101 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 GMLQ99445 158 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 KMT5AQ9NQR1 393 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 MTA2O94776 668 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 TRIM27P14373 513 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 RASA1P20936 1047 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 ADD2P35612 726 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 RAPGEF1Q13905 1077 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 DALRD3Q5D0E6 543 aaKnown RBP9.28□□□□□ -0.92
BRCC3-208ENST00000453705 KRT28Q7Z3Y7 464 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 SLC43A3Q8NBI5 491 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 NELL2Q99435 816 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 API5Q9BZZ5 524 aaKnown RBP9.28□□□□□ -0.92
BRCC3-208ENST00000453705 SMC3Q9UQE7 1217 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 MRVI1Q9Y6F6 885 aa9.28□□□□□ -0.92
BRCC3-208ENST00000453705 GLI3P10071 1580 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 SENP3-EIF4A1A0A087X0R7 540 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 CCDC85CA6NKD9 419 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 AP1G2O75843 785 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 RLBP1P12271 317 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 XRCC5P13010 732 aaKnown RBP9.27□□□□□ -0.93
BRCC3-208ENST00000453705 FAM161AQ3B820 660 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.27□□□□□ -0.93
BRCC3-208ENST00000453705 CCDC34Q96HJ3 373 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 CEP89Q96ST8 783 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 C12orf49Q9H741 205 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 SMC4Q9NTJ3 1288 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 CLEC11AQ9Y240 323 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 HEG1Q9ULI3 1381 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms