RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.24
SNHG4-201ENST00000448190 CHADLQ6NUI6 762 aa16.52■□□□□ 0.24
SNHG4-201ENST00000448190 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
SNHG4-201ENST00000448190 LDHDQ86WU2 507 aa16.52■□□□□ 0.24
SNHG4-201ENST00000448190 SMC1BQ8NDV3 1235 aa16.52■□□□□ 0.24
SNHG4-201ENST00000448190 XAGE2Q96GT9 111 aa16.52■□□□□ 0.24
SNHG4-201ENST00000448190 AKAP2Q9Y2D5 859 aa16.52■□□□□ 0.24
SNHG4-201ENST00000448190 GORABQ5T7V8 394 aa16.51■□□□□ 0.23
SNHG4-201ENST00000448190 PCDHB15Q9Y5E8 787 aa16.51■□□□□ 0.23
SNHG4-201ENST00000448190 HMMRO75330 724 aa16.5■□□□□ 0.23
SNHG4-201ENST00000448190 GRIK5Q16478 980 aa16.5■□□□□ 0.23
SNHG4-201ENST00000448190 CCDC8Q9H0W5 538 aaPredicted RBP16.5■□□□□ 0.23
SNHG4-201ENST00000448190 DICER1Q9UPY3 1922 aaKnown RBP16.5■□□□□ 0.23
SNHG4-201ENST00000448190 ASTN2O75129 1339 aaPredicted RBP16.49■□□□□ 0.23
SNHG4-201ENST00000448190 ZNF280AP59817 542 aaPredicted RBP16.49■□□□□ 0.23
SNHG4-201ENST00000448190 FMR1Q06787 632 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNHG4-201ENST00000448190 FSTL1Q12841 308 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 MFSD14BQ5SR56 506 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 CCDC102BQ68D86 513 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 DLK2Q6UY11 383 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 CNTROBQ8N137 903 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 OGFOD1Q8N543 542 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 WDR90Q96KV7 1748 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 IL1RAPL2Q9NP60 686 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 MYOZ2Q9NPC6 264 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 PCDHAC2Q9Y5I4 1007 aa16.49■□□□□ 0.23
SNHG4-201ENST00000448190 FAM205AQ6ZU69 1335 aa16.48■□□□□ 0.23
SNHG4-201ENST00000448190 SCARF1Q14162 830 aa16.48■□□□□ 0.23
SNHG4-201ENST00000448190 KIF4BQ2VIQ3 1234 aa16.48■□□□□ 0.23
SNHG4-201ENST00000448190 TNNI3KQ59H18 835 aa16.48■□□□□ 0.23
SNHG4-201ENST00000448190 DBNDD2Q9BQY9 259 aa16.48■□□□□ 0.23
SNHG4-201ENST00000448190 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
SNHG4-201ENST00000448190 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
SNHG4-201ENST00000448190 FPGT-TNNI3KV9GXZ4 949 aa16.48■□□□□ 0.23
SNHG4-201ENST00000448190 NBPF9Q3BBW0 867 aa16.47■□□□□ 0.23
SNHG4-201ENST00000448190 USP48Q86UV5 1035 aa16.47■□□□□ 0.23
SNHG4-201ENST00000448190 EAF2Q96CJ1 260 aaPredicted RBP16.47■□□□□ 0.23
SNHG4-201ENST00000448190 TLR7Q9NYK1 1049 aaKnown RBP16.47■□□□□ 0.23
SNHG4-201ENST00000448190 MYO3BQ8WXR4 1341 aa16.46■□□□□ 0.23
SNHG4-201ENST00000448190 TRAF5O00463 557 aa16.46■□□□□ 0.23
SNHG4-201ENST00000448190 ITGBL1O95965 494 aaPredicted RBP16.46■□□□□ 0.23
SNHG4-201ENST00000448190 RBM5P52756 815 aaKnown RBP eCLIP16.46■□□□□ 0.23
SNHG4-201ENST00000448190 HTRA3P83110 453 aa16.46■□□□□ 0.23
SNHG4-201ENST00000448190 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
SNHG4-201ENST00000448190 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.23
SNHG4-201ENST00000448190 GLIS2Q9BZE0 524 aaPredicted RBP16.46■□□□□ 0.23
SNHG4-201ENST00000448190 HDAC9Q9UKV0 1011 aa16.46■□□□□ 0.23
SNHG4-201ENST00000448190 TTF2Q9UNY4 1162 aaKnown RBP16.46■□□□□ 0.23
SNHG4-201ENST00000448190 SMARCA5O60264 1052 aaPredicted RBP16.45■□□□□ 0.22
SNHG4-201ENST00000448190 PI16Q6UXB8 463 aa16.45■□□□□ 0.22
SNHG4-201ENST00000448190 AACSQ86V21 672 aa16.45■□□□□ 0.22
SNHG4-201ENST00000448190 ERC1Q8IUD2 1116 aa16.45■□□□□ 0.22
SNHG4-201ENST00000448190 GPR108Q9NPR9 543 aa16.45■□□□□ 0.22
SNHG4-201ENST00000448190 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
SNHG4-201ENST00000448190 PGAP2Q9UHJ9 254 aa16.45■□□□□ 0.22
SNHG4-201ENST00000448190 FKBP1AP62942 108 aaKnown RBP16.44■□□□□ 0.22
SNHG4-201ENST00000448190 RASGRF1Q13972 1273 aa16.44■□□□□ 0.22
SNHG4-201ENST00000448190 DLGAP5Q15398 846 aa16.44■□□□□ 0.22
SNHG4-201ENST00000448190 CFAP100Q494V2 611 aa16.44■□□□□ 0.22
SNHG4-201ENST00000448190 ANGEL2Q5VTE6 544 aaKnown RBP16.44■□□□□ 0.22
SNHG4-201ENST00000448190 DBNLQ9UJU6 430 aaKnown RBP16.44■□□□□ 0.22
SNHG4-201ENST00000448190 DENND2AQ9ULE3 1009 aa16.44■□□□□ 0.22
SNHG4-201ENST00000448190 SCN9AQ15858 1988 aa16.44■□□□□ 0.22
SNHG4-201ENST00000448190 HSPA6P17066 643 aa16.43■□□□□ 0.22
SNHG4-201ENST00000448190 TTC39AQ5SRH9 613 aa16.43■□□□□ 0.22
SNHG4-201ENST00000448190 TBC1D9Q6ZT07 1266 aa16.43■□□□□ 0.22
SNHG4-201ENST00000448190 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
SNHG4-201ENST00000448190 ZC3H15Q8WU90 426 aaKnown RBP16.43■□□□□ 0.22
SNHG4-201ENST00000448190 DCPSQ96C86 337 aaKnown RBP16.43■□□□□ 0.22
SNHG4-201ENST00000448190 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
SNHG4-201ENST00000448190 PRMT6Q96LA8 375 aaPredicted RBP16.43■□□□□ 0.22
SNHG4-201ENST00000448190 GGA3Q9NZ52 723 aa16.43■□□□□ 0.22
SNHG4-201ENST00000448190 HMG20BQ9P0W2 317 aa16.43■□□□□ 0.22
SNHG4-201ENST00000448190 AOX1Q06278 1338 aa16.43■□□□□ 0.22
SNHG4-201ENST00000448190 ADM5C9JUS6 153 aa16.42■□□□□ 0.22
SNHG4-201ENST00000448190 WNT10BO00744 389 aa16.42■□□□□ 0.22
SNHG4-201ENST00000448190 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
SNHG4-201ENST00000448190 CCDC158Q5M9N0 1113 aa16.42■□□□□ 0.22
SNHG4-201ENST00000448190 KRT26Q7Z3Y9 468 aa16.42■□□□□ 0.22
SNHG4-201ENST00000448190 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
SNHG4-201ENST00000448190 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
SNHG4-201ENST00000448190 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
SNHG4-201ENST00000448190 CLRN2A0PK11 232 aa16.41■□□□□ 0.22
SNHG4-201ENST00000448190 CRKP46108 304 aa16.41■□□□□ 0.22
SNHG4-201ENST00000448190 PRAMEF18Q5VWM3 479 aa16.41■□□□□ 0.22
SNHG4-201ENST00000448190 CDC37L1Q7L3B6 337 aa16.41■□□□□ 0.22
SNHG4-201ENST00000448190 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
SNHG4-201ENST00000448190 SPATA5Q8NB90 893 aa16.41■□□□□ 0.22
SNHG4-201ENST00000448190 ZNF408Q9H9D4 720 aa16.41■□□□□ 0.22
SNHG4-201ENST00000448190 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
SNHG4-201ENST00000448190 ZNF609O15014 1411 aa16.41■□□□□ 0.22
SNHG4-201ENST00000448190 SEMA3EO15041 775 aa16.4■□□□□ 0.22
SNHG4-201ENST00000448190 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
SNHG4-201ENST00000448190 UQCRFS1P1P0C7P4 283 aa16.4■□□□□ 0.22
SNHG4-201ENST00000448190 PRDX5P30044 214 aa16.4■□□□□ 0.22
SNHG4-201ENST00000448190 MCAMP43121 646 aa16.4■□□□□ 0.22
SNHG4-201ENST00000448190 APLP1P51693 650 aa16.4■□□□□ 0.22
SNHG4-201ENST00000448190 ZBED3Q96IU2 234 aaPredicted RBP16.4■□□□□ 0.22
SNHG4-201ENST00000448190 NDUFB9Q9Y6M9 179 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms