RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TBC1D22AQ8WUA7 517 aa13.36□□□□□ -0.27
HDAC6-211ENST00000443563 GMLQ99445 158 aa13.36□□□□□ -0.27
HDAC6-211ENST00000443563 SEMA3EO15041 775 aa13.35□□□□□ -0.27
HDAC6-211ENST00000443563 ZBTB22O15209 634 aa13.35□□□□□ -0.27
HDAC6-211ENST00000443563 ZNF280AP59817 542 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-211ENST00000443563 TIMM10P62072 90 aa13.35□□□□□ -0.27
HDAC6-211ENST00000443563 GORABQ5T7V8 394 aa13.35□□□□□ -0.27
HDAC6-211ENST00000443563 ZC3H15Q8WU90 426 aaKnown RBP13.35□□□□□ -0.27
HDAC6-211ENST00000443563 NEUROD6Q96NK8 337 aa13.35□□□□□ -0.27
HDAC6-211ENST00000443563 CRBNQ96SW2 442 aa13.35□□□□□ -0.27
HDAC6-211ENST00000443563 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
HDAC6-211ENST00000443563 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
HDAC6-211ENST00000443563 SIRT2Q8IXJ6 389 aa13.34□□□□□ -0.27
HDAC6-211ENST00000443563 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
HDAC6-211ENST00000443563 XAGE2Q96GT9 111 aa13.34□□□□□ -0.27
HDAC6-211ENST00000443563 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
HDAC6-211ENST00000443563 EXOC6BQ9Y2D4 811 aa13.34□□□□□ -0.27
HDAC6-211ENST00000443563 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-211ENST00000443563 KIF4BQ2VIQ3 1234 aa13.33□□□□□ -0.28
HDAC6-211ENST00000443563 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
HDAC6-211ENST00000443563 MFSD14BQ5SR56 506 aa13.33□□□□□ -0.28
HDAC6-211ENST00000443563 CCDC102BQ68D86 513 aa13.33□□□□□ -0.28
HDAC6-211ENST00000443563 KIF1BPQ96EK5 621 aa13.33□□□□□ -0.28
HDAC6-211ENST00000443563 MYOZ2Q9NPC6 264 aa13.33□□□□□ -0.28
HDAC6-211ENST00000443563 IQSEC3Q9UPP2 1182 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-211ENST00000443563 SUGT1Q9Y2Z0 365 aa13.33□□□□□ -0.28
HDAC6-211ENST00000443563 FPGT-TNNI3KV9GXZ4 949 aa13.33□□□□□ -0.28
HDAC6-211ENST00000443563 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 ADORA1P30542 326 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 TBC1D10BQ4KMP7 808 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-211ENST00000443563 CCDC158Q5M9N0 1113 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 SAMD7Q7Z3H4 446 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 KIAA0825Q8IV33 1275 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 ZGPATQ8N5A5 531 aaKnown RBP13.32□□□□□ -0.28
HDAC6-211ENST00000443563 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 PGAP2Q9UHJ9 254 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 PDS5AQ29RF7 1337 aaKnown RBP13.32□□□□□ -0.28
HDAC6-211ENST00000443563 ECM29Q5VYK3 1845 aa13.32□□□□□ -0.28
HDAC6-211ENST00000443563 SHTN1A0MZ66 631 aa13.31□□□□□ -0.28
HDAC6-211ENST00000443563 UQCRFS1P1P0C7P4 283 aa13.31□□□□□ -0.28
HDAC6-211ENST00000443563 PHKA1P46020 1223 aa13.31□□□□□ -0.28
HDAC6-211ENST00000443563 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
HDAC6-211ENST00000443563 CLASRPQ8N2M8 674 aaKnown RBP13.31□□□□□ -0.28
HDAC6-211ENST00000443563 CERS5Q8N5B7 392 aa13.31□□□□□ -0.28
HDAC6-211ENST00000443563 RHPN1Q8TCX5 695 aa13.31□□□□□ -0.28
HDAC6-211ENST00000443563 TRPM4Q8TD43 1214 aa13.31□□□□□ -0.28
HDAC6-211ENST00000443563 JAG2Q9Y219 1238 aa13.31□□□□□ -0.28
HDAC6-211ENST00000443563 MAST3O60307 1309 aa13.31□□□□□ -0.28
HDAC6-211ENST00000443563 HIRAP54198 1017 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-211ENST00000443563 TTC39AQ5SRH9 613 aa13.3□□□□□ -0.28
HDAC6-211ENST00000443563 CNTROBQ8N137 903 aa13.3□□□□□ -0.28
HDAC6-211ENST00000443563 MTMR14Q8NCE2 650 aa13.3□□□□□ -0.28
HDAC6-211ENST00000443563 DCPSQ96C86 337 aaKnown RBP13.3□□□□□ -0.28
HDAC6-211ENST00000443563 SERPINA10Q9UK55 444 aa13.3□□□□□ -0.28
HDAC6-211ENST00000443563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-211ENST00000443563 F8W031 263 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-211ENST00000443563 HSPA6P17066 643 aa13.29□□□□□ -0.28
HDAC6-211ENST00000443563 ARID4AP29374 1257 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-211ENST00000443563 HDLBPQ00341 1268 aaKnown RBP13.29□□□□□ -0.28
HDAC6-211ENST00000443563 SCARF1Q14162 830 aa13.29□□□□□ -0.28
HDAC6-211ENST00000443563 DLGAP5Q15398 846 aa13.29□□□□□ -0.28
HDAC6-211ENST00000443563 MAP1SQ66K74 1059 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-211ENST00000443563 SPTY2D1Q68D10 685 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-211ENST00000443563 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
HDAC6-211ENST00000443563 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
HDAC6-211ENST00000443563 TTF2Q9UNY4 1162 aaKnown RBP13.29□□□□□ -0.28
HDAC6-211ENST00000443563 PCDHB15Q9Y5E8 787 aa13.29□□□□□ -0.28
HDAC6-211ENST00000443563 PITPNM2Q9BZ72 1349 aa13.29□□□□□ -0.28
HDAC6-211ENST00000443563 SALL1Q9NSC2 1324 aa13.29□□□□□ -0.28
HDAC6-211ENST00000443563 TRPM7Q96QT4 1865 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 APBB1O00213 710 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 MYO1BO43795 1136 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 EGFRP00533 1210 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
HDAC6-211ENST00000443563 RBM5P52756 815 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDAC6-211ENST00000443563 RASGRF1Q13972 1273 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 AACSQ86V21 672 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 EAF2Q96CJ1 260 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-211ENST00000443563 ZNF512BQ96KM6 892 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-211ENST00000443563 DBNDD2Q9BQY9 259 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 MRIQ9BWK5 157 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 CCDC8Q9H0W5 538 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-211ENST00000443563 DCTPP1Q9H773 170 aa13.28□□□□□ -0.28
HDAC6-211ENST00000443563 POLR2AP24928 1970 aaKnown RBP13.27□□□□□ -0.28
HDAC6-211ENST00000443563 CEP350Q5VT06 3117 aa13.27□□□□□ -0.28
HDAC6-211ENST00000443563 WNT10BO00744 389 aa13.27□□□□□ -0.29
HDAC6-211ENST00000443563 ITGBL1O95965 494 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-211ENST00000443563 LDHBP07195 334 aaKnown RBP13.27□□□□□ -0.29
HDAC6-211ENST00000443563 APLP1P51693 650 aa13.27□□□□□ -0.29
HDAC6-211ENST00000443563 CFAP100Q494V2 611 aa13.27□□□□□ -0.29
HDAC6-211ENST00000443563 SULF1Q8IWU6 871 aa13.27□□□□□ -0.29
HDAC6-211ENST00000443563 SPATA5Q8NB90 893 aa13.27□□□□□ -0.29
HDAC6-211ENST00000443563 TEKT1Q969V4 418 aa13.27□□□□□ -0.29
HDAC6-211ENST00000443563 IL1RAPL2Q9NP60 686 aa13.27□□□□□ -0.29
HDAC6-211ENST00000443563 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
HDAC6-211ENST00000443563 DBNLQ9UJU6 430 aaKnown RBP13.27□□□□□ -0.29
HDAC6-211ENST00000443563 COL1A1P02452 1464 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-211ENST00000443563 IGSF3O75054 1194 aa13.26□□□□□ -0.29
HDAC6-211ENST00000443563 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms