RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CERS5Q8N5B7 392 aa18.01■□□□□ 0.47
LINC00642-202ENST00000442515 MBIPQ9NS73 344 aa18.01■□□□□ 0.47
LINC00642-202ENST00000442515 LAMB1P07942 1786 aa18.01■□□□□ 0.47
LINC00642-202ENST00000442515 DLL1O00548 723 aa18■□□□□ 0.47
LINC00642-202ENST00000442515 USP2O75604 605 aaPredicted RBP18■□□□□ 0.47
LINC00642-202ENST00000442515 ARHGEF6Q15052 776 aa18■□□□□ 0.47
LINC00642-202ENST00000442515 OPTNQ96CV9 577 aa18■□□□□ 0.47
LINC00642-202ENST00000442515 VEZTQ9HBM0 779 aa18■□□□□ 0.47
LINC00642-202ENST00000442515 RBM27Q9P2N5 1060 aaKnown RBP18■□□□□ 0.47
LINC00642-202ENST00000442515 AOX1Q06278 1338 aa17.99■□□□□ 0.47
LINC00642-202ENST00000442515 SPDYE2BA6NHP3 402 aa17.99■□□□□ 0.47
LINC00642-202ENST00000442515 MYO1BO43795 1136 aa17.99■□□□□ 0.47
LINC00642-202ENST00000442515 SPDYE6P0CI01 402 aa17.99■□□□□ 0.47
LINC00642-202ENST00000442515 IGHMBP2P38935 993 aaKnown RBP17.99■□□□□ 0.47
LINC00642-202ENST00000442515 MS4A4AQ96JQ5 239 aa17.99■□□□□ 0.47
LINC00642-202ENST00000442515 ELP3Q9H9T3 547 aa17.99■□□□□ 0.47
LINC00642-202ENST00000442515 CD209Q9NNX6 404 aa17.99■□□□□ 0.47
LINC00642-202ENST00000442515 F8W031 263 aaPredicted RBP17.98■□□□□ 0.47
LINC00642-202ENST00000442515 DDX58O95786 925 aaKnown RBP17.98■□□□□ 0.47
LINC00642-202ENST00000442515 IGKV5-2P06315 115 aa17.98■□□□□ 0.47
LINC00642-202ENST00000442515 TAF1CQ15572 869 aaPredicted RBP17.98■□□□□ 0.47
LINC00642-202ENST00000442515 CFAP100Q494V2 611 aa17.98■□□□□ 0.47
LINC00642-202ENST00000442515 SH3TC2Q8TF17 1288 aa17.98■□□□□ 0.47
LINC00642-202ENST00000442515 BRI3BPQ8WY22 251 aa17.98■□□□□ 0.47
LINC00642-202ENST00000442515 ZFYVE28Q9HCC9 887 aa17.98■□□□□ 0.47
LINC00642-202ENST00000442515 MAP3K2Q9Y2U5 619 aa17.98■□□□□ 0.47
LINC00642-202ENST00000442515 RASA3Q14644 834 aa17.97■□□□□ 0.47
LINC00642-202ENST00000442515 PRMT6Q96LA8 375 aaPredicted RBP17.97■□□□□ 0.47
LINC00642-202ENST00000442515 ANKRD2Q9GZV1 360 aa17.97■□□□□ 0.47
LINC00642-202ENST00000442515 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.47
LINC00642-202ENST00000442515 KCNJ4P48050 445 aa17.96■□□□□ 0.47
LINC00642-202ENST00000442515 SLC17A8Q8NDX2 589 aa17.96■□□□□ 0.47
LINC00642-202ENST00000442515 CNKSR2Q8WXI2 1034 aa17.96■□□□□ 0.47
LINC00642-202ENST00000442515 SHISA4Q96DD7 197 aa17.96■□□□□ 0.47
LINC00642-202ENST00000442515 CCL15-CCL14A0A0B4J2E2 113 aa17.95■□□□□ 0.46
LINC00642-202ENST00000442515 CCL15Q16663 113 aa17.95■□□□□ 0.46
LINC00642-202ENST00000442515 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
LINC00642-202ENST00000442515 RUNDC1Q96C34 613 aa17.95■□□□□ 0.46
LINC00642-202ENST00000442515 ARHGAP39Q9C0H5 1083 aa17.95■□□□□ 0.46
LINC00642-202ENST00000442515 IRS2Q9Y4H2 1338 aa17.95■□□□□ 0.46
LINC00642-202ENST00000442515 ZNF853P0CG23 659 aa17.94■□□□□ 0.46
LINC00642-202ENST00000442515 ITGA6P23229 1130 aa17.94■□□□□ 0.46
LINC00642-202ENST00000442515 CHRNDQ07001 517 aa17.94■□□□□ 0.46
LINC00642-202ENST00000442515 DPF3Q92784 378 aa17.94■□□□□ 0.46
LINC00642-202ENST00000442515 MPHOSPH8Q99549 860 aa17.94■□□□□ 0.46
LINC00642-202ENST00000442515 SPEF2Q9C093 1822 aa17.93■□□□□ 0.46
LINC00642-202ENST00000442515 SNAP23O00161 211 aa17.93■□□□□ 0.46
LINC00642-202ENST00000442515 GTF2A2P52657 109 aa17.93■□□□□ 0.46
LINC00642-202ENST00000442515 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
LINC00642-202ENST00000442515 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.93■□□□□ 0.46
LINC00642-202ENST00000442515 CDAN1Q8IWY9 1227 aa17.93■□□□□ 0.46
LINC00642-202ENST00000442515 PRO3102Q9H379 93 aa17.93■□□□□ 0.46
LINC00642-202ENST00000442515 JAG2Q9Y219 1238 aa17.93■□□□□ 0.46
LINC00642-202ENST00000442515 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
LINC00642-202ENST00000442515 NEURL1BA8MQ27 555 aa17.92■□□□□ 0.46
LINC00642-202ENST00000442515 RBM5P52756 815 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC00642-202ENST00000442515 LACTBP83111 547 aaPredicted RBP17.92■□□□□ 0.46
LINC00642-202ENST00000442515 VGLL4Q14135 290 aa17.92■□□□□ 0.46
LINC00642-202ENST00000442515 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
LINC00642-202ENST00000442515 UBE3BQ7Z3V4 1068 aa17.92■□□□□ 0.46
LINC00642-202ENST00000442515 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
LINC00642-202ENST00000442515 FKBP1AP62942 108 aaKnown RBP17.91■□□□□ 0.46
LINC00642-202ENST00000442515 TNFAIP1Q13829 316 aa17.91■□□□□ 0.46
LINC00642-202ENST00000442515 KIF22Q14807 665 aa17.91■□□□□ 0.46
LINC00642-202ENST00000442515 MTFR1Q15390 333 aa17.91■□□□□ 0.46
LINC00642-202ENST00000442515 SPDYE2Q495Y8 402 aa17.91■□□□□ 0.46
LINC00642-202ENST00000442515 C8orf58Q8NAV2 365 aa17.91■□□□□ 0.46
LINC00642-202ENST00000442515 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
LINC00642-202ENST00000442515 OTOFQ9HC10 1997 aa17.91■□□□□ 0.46
LINC00642-202ENST00000442515 TLR2O60603 784 aa17.9■□□□□ 0.46
LINC00642-202ENST00000442515 IL1R1P14778 569 aa17.9■□□□□ 0.46
LINC00642-202ENST00000442515 NEXNQ0ZGT2 675 aa17.9■□□□□ 0.46
LINC00642-202ENST00000442515 RALBP1Q15311 655 aa17.9■□□□□ 0.46
LINC00642-202ENST00000442515 C15orf52Q6ZUT6 534 aaKnown RBP17.9■□□□□ 0.46
LINC00642-202ENST00000442515 TEPSINQ96N21 525 aa17.9■□□□□ 0.46
LINC00642-202ENST00000442515 PLA2G12BQ9BX93 195 aa17.9■□□□□ 0.46
LINC00642-202ENST00000442515 H7C1W4 665 aa17.89■□□□□ 0.45
LINC00642-202ENST00000442515 TAF5LO75529 589 aa17.89■□□□□ 0.45
LINC00642-202ENST00000442515 CCDC30Q5VVM6 783 aa17.89■□□□□ 0.45
LINC00642-202ENST00000442515 ZNF804AQ7Z570 1209 aa17.89■□□□□ 0.45
LINC00642-202ENST00000442515 UBE2Q1Q7Z7E8 422 aa17.89■□□□□ 0.45
LINC00642-202ENST00000442515 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.89■□□□□ 0.45
LINC00642-202ENST00000442515 ZNF70Q9UC06 446 aaPredicted RBP17.89■□□□□ 0.45
LINC00642-202ENST00000442515 CSADQ9Y600 493 aa17.89■□□□□ 0.45
LINC00642-202ENST00000442515 UNC80Q8N2C7 3258 aa17.89■□□□□ 0.45
LINC00642-202ENST00000442515 WDHD1O75717 1129 aaPredicted RBP17.88■□□□□ 0.45
LINC00642-202ENST00000442515 GNRH1P01148 92 aa17.88■□□□□ 0.45
LINC00642-202ENST00000442515 PRMT2P55345 433 aa17.88■□□□□ 0.45
LINC00642-202ENST00000442515 MAP3K9P80192 1104 aa17.88■□□□□ 0.45
LINC00642-202ENST00000442515 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00642-202ENST00000442515 ECM29Q5VYK3 1845 aa17.87■□□□□ 0.45
LINC00642-202ENST00000442515 SPDYE5A6NIY4 337 aa17.87■□□□□ 0.45
LINC00642-202ENST00000442515 BTBD19C9JJ37 291 aa17.87■□□□□ 0.45
LINC00642-202ENST00000442515 ECM2O94769 699 aaPredicted RBP17.87■□□□□ 0.45
LINC00642-202ENST00000442515 CSF1RP07333 972 aa17.87■□□□□ 0.45
LINC00642-202ENST00000442515 GNAI1P63096 354 aa17.87■□□□□ 0.45
LINC00642-202ENST00000442515 HELBQ8NG08 1087 aaPredicted RBP17.87■□□□□ 0.45
LINC00642-202ENST00000442515 NKX2-3Q8TAU0 364 aa17.87■□□□□ 0.45
LINC00642-202ENST00000442515 HTATIP2Q9BUP3 242 aa17.87■□□□□ 0.45
LINC00642-202ENST00000442515 TMEM39BQ9GZU3 492 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms