RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 CWC22Q9HCG8 908 aaKnown RBP22.43■■□□□ 1.18
POLR1E-203ENST00000442009 KRT32Q14532 448 aa22.43■■□□□ 1.18
POLR1E-203ENST00000442009 WWC3Q9ULE0 1092 aa22.43■■□□□ 1.18
POLR1E-203ENST00000442009 ANKRD31Q8N7Z5 1873 aa22.42■■□□□ 1.18
POLR1E-203ENST00000442009 PNPLA7Q6ZV29 1317 aa22.42■■□□□ 1.18
POLR1E-203ENST00000442009 IDH1O75874 414 aaKnown RBP22.42■■□□□ 1.18
POLR1E-203ENST00000442009 CAMKK2Q96RR4 588 aa22.42■■□□□ 1.18
POLR1E-203ENST00000442009 PDRG1Q9NUG6 133 aa22.42■■□□□ 1.18
POLR1E-203ENST00000442009 ZNF532Q9HCE3 1301 aa22.41■■□□□ 1.18
POLR1E-203ENST00000442009 CAVIN4Q5BKX8 364 aa22.41■■□□□ 1.18
POLR1E-203ENST00000442009 ZGPATQ8N5A5 531 aaKnown RBP22.41■■□□□ 1.18
POLR1E-203ENST00000442009 GNL3LQ9NVN8 582 aaKnown RBP22.41■■□□□ 1.18
POLR1E-203ENST00000442009 LIMCH1Q9UPQ0 1083 aa22.41■■□□□ 1.18
POLR1E-203ENST00000442009 COL1A1P02452 1464 aaPredicted RBP22.41■■□□□ 1.18
POLR1E-203ENST00000442009 GPAA1O43292 621 aa22.41■■□□□ 1.18
POLR1E-203ENST00000442009 FRAT2O75474 233 aaPredicted RBP22.41■■□□□ 1.18
POLR1E-203ENST00000442009 MAP3K12Q12852 859 aa22.41■■□□□ 1.18
POLR1E-203ENST00000442009 RAB3GAP1Q15042 981 aa22.41■■□□□ 1.18
POLR1E-203ENST00000442009 SEMA3EO15041 775 aa22.4■■□□□ 1.18
POLR1E-203ENST00000442009 RPS6KB1P23443 525 aa22.4■■□□□ 1.18
POLR1E-203ENST00000442009 KLRK1P26718 216 aa22.4■■□□□ 1.18
POLR1E-203ENST00000442009 LAMA4Q16363 1823 aa22.39■■□□□ 1.18
POLR1E-203ENST00000442009 PDS5AQ29RF7 1337 aaKnown RBP22.39■■□□□ 1.18
POLR1E-203ENST00000442009 BLOC1S2Q6QNY1 142 aa22.39■■□□□ 1.17
POLR1E-203ENST00000442009 RPGRQ92834 1020 aaKnown RBP22.39■■□□□ 1.17
POLR1E-203ENST00000442009 STOX1Q6ZVD7 989 aa22.38■■□□□ 1.17
POLR1E-203ENST00000442009 CRAMP1Q96RY5 1269 aa22.38■■□□□ 1.17
POLR1E-203ENST00000442009 LEMD3Q9Y2U8 911 aa22.38■■□□□ 1.17
POLR1E-203ENST00000442009 RBM17Q96I25 401 aaKnown RBP22.38■■□□□ 1.17
POLR1E-203ENST00000442009 NEK1Q96PY6 1258 aa22.38■■□□□ 1.17
POLR1E-203ENST00000442009 BRIP1Q9BX63 1249 aa22.38■■□□□ 1.17
POLR1E-203ENST00000442009 A0A0G2JLW4 131 aa22.37■■□□□ 1.17
POLR1E-203ENST00000442009 BBOX1O75936 387 aa22.37■■□□□ 1.17
POLR1E-203ENST00000442009 FGAP02671 866 aa22.37■■□□□ 1.17
POLR1E-203ENST00000442009 NOL8Q76FK4 1167 aaKnown RBP22.37■■□□□ 1.17
POLR1E-203ENST00000442009 SLC51AQ86UW1 340 aa22.37■■□□□ 1.17
POLR1E-203ENST00000442009 CTNNA3Q9UI47 895 aa22.37■■□□□ 1.17
POLR1E-203ENST00000442009 DENND2AQ9ULE3 1009 aa22.37■■□□□ 1.17
POLR1E-203ENST00000442009 QSER1Q2KHR3 1735 aa22.36■■□□□ 1.17
POLR1E-203ENST00000442009 MYH13Q9UKX3 1938 aa22.36■■□□□ 1.17
POLR1E-203ENST00000442009 HIBADHP31937 336 aaKnown RBP22.36■■□□□ 1.17
POLR1E-203ENST00000442009 C15orf52Q6ZUT6 534 aaKnown RBP22.36■■□□□ 1.17
POLR1E-203ENST00000442009 TXNRD3Q86VQ6 643 aa22.36■■□□□ 1.17
POLR1E-203ENST00000442009 MAGEB6Q8N7X4 407 aa22.36■■□□□ 1.17
POLR1E-203ENST00000442009 STRBPQ96SI9 672 aaKnown RBP22.36■■□□□ 1.17
POLR1E-203ENST00000442009 IQSEC3Q9UPP2 1182 aaPredicted RBP22.36■■□□□ 1.17
POLR1E-203ENST00000442009 XDHP47989 1333 aa22.36■■□□□ 1.17
POLR1E-203ENST00000442009 EZH2Q15910 746 aaKnown RBP22.36■■□□□ 1.17
POLR1E-203ENST00000442009 TTLL5Q6EMB2 1281 aa22.36■■□□□ 1.17
POLR1E-203ENST00000442009 CACNA1SQ13698 1873 aa22.35■■□□□ 1.17
POLR1E-203ENST00000442009 TNPO1Q92973 898 aaKnown RBP22.35■■□□□ 1.17
POLR1E-203ENST00000442009 ZSCAN31Q96LW9 406 aaPredicted RBP22.35■■□□□ 1.17
POLR1E-203ENST00000442009 ANO8Q9HCE9 1232 aaPredicted RBP22.35■■□□□ 1.17
POLR1E-203ENST00000442009 LRRC37AA6NMS7 1700 aa22.34■■□□□ 1.17
POLR1E-203ENST00000442009 EN1Q05925 392 aaPredicted RBP22.34■■□□□ 1.17
POLR1E-203ENST00000442009 TOB2Q14106 344 aaPredicted RBP22.34■■□□□ 1.17
POLR1E-203ENST00000442009 VPS37DQ86XT2 251 aa22.34■■□□□ 1.17
POLR1E-203ENST00000442009 E7EWF7 191 aa22.34■■□□□ 1.17
POLR1E-203ENST00000442009 HMGB1P09429 215 aaKnown RBP22.34■■□□□ 1.17
POLR1E-203ENST00000442009 NUCB2P80303 420 aa22.34■■□□□ 1.17
POLR1E-203ENST00000442009 ANKRD1Q15327 319 aa22.34■■□□□ 1.17
POLR1E-203ENST00000442009 ALX1Q15699 326 aa22.34■■□□□ 1.17
POLR1E-203ENST00000442009 SLC15A2Q16348 729 aa22.34■■□□□ 1.17
POLR1E-203ENST00000442009 CLEC17AQ6ZS10 378 aa22.34■■□□□ 1.17
POLR1E-203ENST00000442009 LARP6Q9BRS8 491 aaKnown RBP22.34■■□□□ 1.17
POLR1E-203ENST00000442009 SH2B1Q9NRF2 756 aaPredicted RBP22.34■■□□□ 1.17
POLR1E-203ENST00000442009 LARGE1O95461 756 aa22.33■■□□□ 1.16
POLR1E-203ENST00000442009 MMP10P09238 476 aa22.33■■□□□ 1.16
POLR1E-203ENST00000442009 EXOSC10Q01780 885 aaKnown RBP22.33■■□□□ 1.16
POLR1E-203ENST00000442009 LTBP1Q14766 1721 aa22.33■■□□□ 1.16
POLR1E-203ENST00000442009 ANKIB1Q9P2G1 1089 aa22.33■■□□□ 1.16
POLR1E-203ENST00000442009 LRP2BPQ9P2M1 347 aa22.33■■□□□ 1.16
POLR1E-203ENST00000442009 TPCN1Q9ULQ1 816 aa22.33■■□□□ 1.16
POLR1E-203ENST00000442009 GPSM2P81274 684 aa22.32■■□□□ 1.16
POLR1E-203ENST00000442009 PODXL2Q9NZ53 605 aa22.32■■□□□ 1.16
POLR1E-203ENST00000442009 SRGNP10124 158 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 ME3Q16798 604 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 DHX32Q7L7V1 743 aaKnown RBP22.31■■□□□ 1.16
POLR1E-203ENST00000442009 TMC4Q7Z404 712 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 TCEANC2Q96MN5 208 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 ZDHHC9Q9Y397 364 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 ZMYM6O95789 1325 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 MCM4P33991 863 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 ST3GAL1Q11201 340 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 PKP1Q13835 747 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 IMMTQ16891 758 aaKnown RBP22.31■■□□□ 1.16
POLR1E-203ENST00000442009 ZNF384Q8TF68 577 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 AIDAQ96BJ3 306 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 AGXT2Q9BYV1 514 aa22.31■■□□□ 1.16
POLR1E-203ENST00000442009 PATL2C9JE40 543 aaKnown RBP22.3■■□□□ 1.16
POLR1E-203ENST00000442009 PARP3Q9Y6F1 533 aa22.3■■□□□ 1.16
POLR1E-203ENST00000442009 MBD4O95243 580 aa22.29■■□□□ 1.16
POLR1E-203ENST00000442009 ADGRA1Q86SQ6 560 aa22.29■■□□□ 1.16
POLR1E-203ENST00000442009 FBXL16Q8N461 479 aa22.29■■□□□ 1.16
POLR1E-203ENST00000442009 TDRD7Q8NHU6 1098 aaKnown RBP22.29■■□□□ 1.16
POLR1E-203ENST00000442009 ABCF2Q9UG63 623 aa22.29■■□□□ 1.16
POLR1E-203ENST00000442009 ATP2B4P23634 1241 aa22.29■■□□□ 1.16
POLR1E-203ENST00000442009 SP8Q8IXZ3 490 aa22.29■■□□□ 1.16
POLR1E-203ENST00000442009 NBPF3Q9H094 633 aa22.29■■□□□ 1.16
POLR1E-203ENST00000442009 COL11A2P13942 1736 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms