RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 RARAP10276 462 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 BMP1P13497 986 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 SFSWAPQ12872 951 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 NCAPG2Q86XI2 1143 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 PLD4Q96BZ4 506 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 NECAB3Q96P71 396 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 SPC25Q9HBM1 224 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 ST7Q9NRC1 585 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 TLR3O15455 904 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 KCNQ4P56696 695 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 CCINQ13939 588 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 SPRED3Q2MJR0 410 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 SAMD5Q5TGI4 173 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 BNC2Q6ZN30 1099 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 TRIM46Q7Z4K8 759 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 TRIM42Q8IWZ5 723 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 RPUSD2Q8IZ73 545 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 HHIPQ96QV1 700 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 CEP44Q9C0F1 390 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 METTL14Q9HCE5 456 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 DZANK1Q9NVP4 752 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 KCNH4Q9UQ05 1017 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 ESYT3A0FGR9 886 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 C11orf95C9JLR9 678 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 KIF4AO95239 1232 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 F13A1P00488 732 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 ITPKAP23677 461 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 TNNI3KQ59H18 835 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 TRIM47Q96LD4 638 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 CCDC113Q9H0I3 377 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 SENP2Q9HC62 589 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 SEC31BQ9NQW1 1179 aa5.71□□□□□ -1.5
CDC42BPA-207ENST00000441725 FAAP100Q0VG06 881 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 DDR2Q16832 855 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 KANK3Q6NY19 840 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 NLRP8Q86W28 1048 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 FIGNL2A6NMB9 653 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 TRIM37O94972 964 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 GIPRP48546 466 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 EIF6P56537 245 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 FBXW10Q5XX13 1052 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 CEP120Q8N960 986 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 APPBP2Q92624 585 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 KIFC2Q96AC6 838 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 PRKAB1Q9Y478 270 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 PCDHB5Q9Y5E4 795 aa5.7□□□□□ -1.5
CDC42BPA-207ENST00000441725 TTLL8A6PVC2 850 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 EFSO43281 561 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 PARNO95453 639 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 NFKB1P19838 968 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 MCM4P33991 863 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 RPS26P62854 115 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 AMPD3Q01432 767 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 SEPT6Q14141 434 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 RASIP1Q5U651 963 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 MRPL14Q6P1L8 145 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 PGBD3Q8N328 593 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 TRPM4Q8TD43 1214 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 GATAD2BQ8WXI9 593 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 LRRC3Q9BY71 257 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 TNKS2Q9H2K2 1166 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 ZFYVE1Q9HBF4 777 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 MAPK8IP1Q9UQF2 711 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 DCDC2BA2VCK2 349 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 FAM221AA4D161 298 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 NFKBIEO00221 500 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 PDPK1O15530 556 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 F11P03951 625 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 SNRPBP14678 240 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 SOX18P35713 384 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 KIAA0907Q7Z7F0 614 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 STAG1Q8WVM7 1258 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 JARID2Q92833 1246 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 NSUN5Q96P11 429 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 FERD3LQ96RJ6 166 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 GAS2L1Q99501 681 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 SLKQ9H2G2 1235 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 ZNF576Q9H609 170 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 TLR7Q9NYK1 1049 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 ACTR10Q9NZ32 417 aa5.69□□□□□ -1.5
CDC42BPA-207ENST00000441725 A0A096LPE4 126 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 A0A1W2PPZ6 126 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 PSAPP07602 524 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 ZNF157P51786 506 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 GYS2P54840 703 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 IFRD2Q12894 506 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 SQSTM1Q13501 440 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 TAF7LQ5H9L4 462 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 ASAP3Q8TDY4 903 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 BHLHE41Q9C0J9 482 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 ROBO2Q9HCK4 1378 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 STRN4Q9NRL3 753 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 TMEM260Q9NX78 707 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 GPN3Q9UHW5 284 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 HCN2Q9UL51 889 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 LEMD3Q9Y2U8 911 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 DYRK1BQ9Y463 629 aa5.68□□□□□ -1.5
CDC42BPA-207ENST00000441725 PPP1R12AO14974 1030 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 THBS1P07996 1170 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 FAM157BP0CG42 384 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms