RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 KRT13P13646 458 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 ATP1A2P50993 1020 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
PCNX1-202ENST00000439984 TBC1D31Q96DN5 1066 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 USP5P45974 858 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 FAM114A1Q8IWE2 563 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 NAPBQ9H115 298 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 VEZTQ9HBM0 779 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 FBXO38Q6PIJ6 1188 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCNX1-202ENST00000439984 ZBTB16Q05516 673 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 BRD3Q15059 726 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 KIAA1524Q8TCG1 905 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 MMRN2Q9H8L6 949 aa16.58■□□□□ 0.25
PCNX1-202ENST00000439984 CCDC196A0A1B0GTZ2 297 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 EFCAB8A8MWE9 144 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 WASLO00401 505 aaPredicted RBP16.58■□□□□ 0.24
PCNX1-202ENST00000439984 NCBP1Q09161 790 aaKnown RBP16.58■□□□□ 0.24
PCNX1-202ENST00000439984 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 PSMB7Q99436 277 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 SELENOOQ9BVL4 669 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 EVA1CP58658 441 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 MIPOL1Q8TD10 442 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 HINFPQ9BQA5 517 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 RAD51AP2Q09MP3 1159 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 E2F5Q15329 346 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 MYD88Q99836 296 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 DESI2Q9BSY9 194 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 FAM204AQ9H8W3 233 aa16.58■□□□□ 0.24
PCNX1-202ENST00000439984 CNGA4Q8IV77 575 aa16.57■□□□□ 0.24
PCNX1-202ENST00000439984 NSD2O96028 1365 aa16.57■□□□□ 0.24
PCNX1-202ENST00000439984 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
PCNX1-202ENST00000439984 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
PCNX1-202ENST00000439984 C8orf74Q6P047 294 aa16.57■□□□□ 0.24
PCNX1-202ENST00000439984 CCDC25Q86WR0 208 aa16.57■□□□□ 0.24
PCNX1-202ENST00000439984 FAM114A2Q9NRY5 505 aa16.57■□□□□ 0.24
PCNX1-202ENST00000439984 STK38LQ9Y2H1 464 aa16.57■□□□□ 0.24
PCNX1-202ENST00000439984 CLCN6P51797 869 aa16.57■□□□□ 0.24
PCNX1-202ENST00000439984 ADKP55263 362 aaKnown RBP16.57■□□□□ 0.24
PCNX1-202ENST00000439984 SPATS2LQ9NUQ6 558 aaKnown RBP16.57■□□□□ 0.24
PCNX1-202ENST00000439984 SPAG1Q07617 926 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 HOOK3Q86VS8 718 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 PPFIBP2Q8ND30 876 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 LRP2BPQ9P2M1 347 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 ZMYM4Q5VZL5 1548 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 ZBTB7BO15156 539 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-202ENST00000439984 SEPT6Q14141 434 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 FAN1Q9Y2M0 1017 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 SAMM50Q9Y512 469 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 NAA30Q147X3 362 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-202ENST00000439984 SLC24A3Q9HC58 644 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 LUC7L2Q9Y383 392 aaKnown RBP16.56■□□□□ 0.24
PCNX1-202ENST00000439984 ABCC10Q5T3U5 1492 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 THEMISQ8N1K5 641 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-202ENST00000439984 CAPS2Q9BXY5 557 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 TPX2Q9ULW0 747 aaKnown RBP16.56■□□□□ 0.24
PCNX1-202ENST00000439984 SETDB1Q15047 1291 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 KIF6Q6ZMV9 814 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 STIM2Q9P246 746 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 NSFL1CQ9UNZ2 370 aaKnown RBP16.56■□□□□ 0.24
PCNX1-202ENST00000439984 SNX14Q9Y5W7 946 aa16.56■□□□□ 0.24
PCNX1-202ENST00000439984 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
PCNX1-202ENST00000439984 EFCAB13Q8IY85 973 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 VPS16Q9H269 839 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 CETN2P41208 172 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 INTS8Q75QN2 995 aaKnown RBP16.55■□□□□ 0.24
PCNX1-202ENST00000439984 ZNF518AQ6AHZ1 1483 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 PPFIA1Q13136 1202 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 IFT74Q96LB3 600 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 PIK3C2GO75747 1445 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
PCNX1-202ENST00000439984 UBA7P41226 1012 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 NCOA7Q8NI08 942 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 N4BP2L2Q92802 583 aaPredicted RBP16.55■□□□□ 0.24
PCNX1-202ENST00000439984 BICC1Q9H694 974 aaKnown RBP16.55■□□□□ 0.24
PCNX1-202ENST00000439984 MAST1Q9Y2H9 1570 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 POLR3AO14802 1390 aaPredicted RBP16.55■□□□□ 0.24
PCNX1-202ENST00000439984 NR1I2O75469 434 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 ETF1P62495 437 aaKnown RBP16.55■□□□□ 0.24
PCNX1-202ENST00000439984 NUTM2AQ8IVF1 878 aaPredicted RBP16.55■□□□□ 0.24
PCNX1-202ENST00000439984 RGS22Q8NE09 1264 aa16.55■□□□□ 0.24
PCNX1-202ENST00000439984 ELP1O95163 1332 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 GPIHBP1Q8IV16 184 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 CCDC194A0A1B0GVG4 234 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 GBP1P32455 592 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 TTF2Q9UNY4 1162 aaKnown RBP16.54■□□□□ 0.24
PCNX1-202ENST00000439984 IFI16Q16666 785 aaKnown RBP16.54■□□□□ 0.24
PCNX1-202ENST00000439984 TMEM132AQ24JP5 1023 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 STMN4Q9H169 189 aaPredicted RBP16.54■□□□□ 0.24
PCNX1-202ENST00000439984 DDX41Q9UJV9 622 aaKnown RBP16.54■□□□□ 0.24
PCNX1-202ENST00000439984 STAMBPO95630 424 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 ZFYP08048 801 aaPredicted RBP16.54■□□□□ 0.24
PCNX1-202ENST00000439984 MAP3K9P80192 1104 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 EXOC1Q9NV70 894 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 PPP1R13BQ96KQ4 1090 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms