RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ERC1Q8IUD2 1116 aa14.59□□□□□ -0.07
HSPG2-206ENST00000439717 SIRT2Q8IXJ6 389 aa14.59□□□□□ -0.07
HSPG2-206ENST00000439717 OGFOD1Q8N543 542 aa14.59□□□□□ -0.07
HSPG2-206ENST00000439717 ZC3H15Q8WU90 426 aaKnown RBP14.59□□□□□ -0.07
HSPG2-206ENST00000439717 MXD3Q9BW11 206 aa14.59□□□□□ -0.07
HSPG2-206ENST00000439717 SHTN1A0MZ66 631 aa14.58□□□□□ -0.08
HSPG2-206ENST00000439717 SEMA3EO15041 775 aa14.58□□□□□ -0.08
HSPG2-206ENST00000439717 TRPM4Q8TD43 1214 aa14.58□□□□□ -0.08
HSPG2-206ENST00000439717 TBC1D22AQ8WUA7 517 aa14.58□□□□□ -0.08
HSPG2-206ENST00000439717 PGAP2Q9UHJ9 254 aa14.58□□□□□ -0.08
HSPG2-206ENST00000439717 HDAC9Q9UKV0 1011 aa14.58□□□□□ -0.08
HSPG2-206ENST00000439717 ARAP2Q8WZ64 1704 aa14.58□□□□□ -0.08
HSPG2-206ENST00000439717 ADORA1P30542 326 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 HIRAP54198 1017 aaPredicted RBP14.57□□□□□ -0.08
HSPG2-206ENST00000439717 AAMPQ13685 434 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 KIF4BQ2VIQ3 1234 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 TBC1D10BQ4KMP7 808 aaPredicted RBP14.57□□□□□ -0.08
HSPG2-206ENST00000439717 MFSD14BQ5SR56 506 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 SAMD7Q7Z3H4 446 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 KIAA0825Q8IV33 1275 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 CERS5Q8N5B7 392 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 XAGE2Q96GT9 111 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 NEUROD6Q96NK8 337 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 CRBNQ96SW2 442 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 MYOZ2Q9NPC6 264 aa14.57□□□□□ -0.08
HSPG2-206ENST00000439717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.57□□□□□ -0.08
HSPG2-206ENST00000439717 RAB11FIP3O75154 756 aa14.56□□□□□ -0.08
HSPG2-206ENST00000439717 TNNI3KQ59H18 835 aa14.56□□□□□ -0.08
HSPG2-206ENST00000439717 CCDC102BQ68D86 513 aa14.56□□□□□ -0.08
HSPG2-206ENST00000439717 CNTROBQ8N137 903 aa14.56□□□□□ -0.08
HSPG2-206ENST00000439717 DENND2AQ9ULE3 1009 aa14.56□□□□□ -0.08
HSPG2-206ENST00000439717 IQSEC3Q9UPP2 1182 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-206ENST00000439717 JAG2Q9Y219 1238 aa14.56□□□□□ -0.08
HSPG2-206ENST00000439717 EXOC6BQ9Y2D4 811 aa14.56□□□□□ -0.08
HSPG2-206ENST00000439717 FPGT-TNNI3KV9GXZ4 949 aa14.56□□□□□ -0.08
HSPG2-206ENST00000439717 EGFRP00533 1210 aa14.55□□□□□ -0.08
HSPG2-206ENST00000439717 HSPA6P17066 643 aa14.55□□□□□ -0.08
HSPG2-206ENST00000439717 PHKA1P46020 1223 aa14.55□□□□□ -0.08
HSPG2-206ENST00000439717 CHAF1AQ13111 956 aaPredicted RBP14.55□□□□□ -0.08
HSPG2-206ENST00000439717 GORABQ5T7V8 394 aa14.55□□□□□ -0.08
HSPG2-206ENST00000439717 RBM26Q5T8P6 1007 aaKnown RBP14.55□□□□□ -0.08
HSPG2-206ENST00000439717 MAP1SQ66K74 1059 aaPredicted RBP14.55□□□□□ -0.08
HSPG2-206ENST00000439717 WDR66Q8TBY9 1149 aa14.55□□□□□ -0.08
HSPG2-206ENST00000439717 SUGT1Q9Y2Z0 365 aa14.55□□□□□ -0.08
HSPG2-206ENST00000439717 SUPT16HQ9Y5B9 1047 aaKnown RBP14.55□□□□□ -0.08
HSPG2-206ENST00000439717 ITGBL1O95965 494 aaPredicted RBP14.54□□□□□ -0.08
HSPG2-206ENST00000439717 MTMR14Q8NCE2 650 aa14.54□□□□□ -0.08
HSPG2-206ENST00000439717 RHPN1Q8TCX5 695 aa14.54□□□□□ -0.08
HSPG2-206ENST00000439717 KIF1BPQ96EK5 621 aa14.54□□□□□ -0.08
HSPG2-206ENST00000439717 PDS5AQ29RF7 1337 aaKnown RBP14.54□□□□□ -0.08
HSPG2-206ENST00000439717 PASKQ96RG2 1323 aa14.53□□□□□ -0.08
HSPG2-206ENST00000439717 SCARF1Q14162 830 aa14.53□□□□□ -0.08
HSPG2-206ENST00000439717 DCPSQ96C86 337 aaKnown RBP14.53□□□□□ -0.08
HSPG2-206ENST00000439717 MAST3O60307 1309 aa14.52□□□□□ -0.08
HSPG2-206ENST00000439717 PITPNM2Q9BZ72 1349 aa14.52□□□□□ -0.08
HSPG2-206ENST00000439717 SALL1Q9NSC2 1324 aa14.52□□□□□ -0.08
HSPG2-206ENST00000439717 F8W031 263 aaPredicted RBP14.52□□□□□ -0.09
HSPG2-206ENST00000439717 UQCRFS1P1P0C7P4 283 aa14.52□□□□□ -0.09
HSPG2-206ENST00000439717 ARID4AP29374 1257 aaPredicted RBP14.52□□□□□ -0.09
HSPG2-206ENST00000439717 APLP1P51693 650 aa14.52□□□□□ -0.09
HSPG2-206ENST00000439717 HDLBPQ00341 1268 aaKnown RBP14.52□□□□□ -0.09
HSPG2-206ENST00000439717 DLGAP5Q15398 846 aa14.52□□□□□ -0.09
HSPG2-206ENST00000439717 CCDC158Q5M9N0 1113 aa14.52□□□□□ -0.09
HSPG2-206ENST00000439717 CDC37L1Q7L3B6 337 aa14.52□□□□□ -0.09
HSPG2-206ENST00000439717 CLASRPQ8N2M8 674 aaKnown RBP14.52□□□□□ -0.09
HSPG2-206ENST00000439717 ZGPATQ8N5A5 531 aaKnown RBP14.52□□□□□ -0.09
HSPG2-206ENST00000439717 EAF2Q96CJ1 260 aaPredicted RBP14.52□□□□□ -0.09
HSPG2-206ENST00000439717 ZBED3Q96IU2 234 aaPredicted RBP14.52□□□□□ -0.09
HSPG2-206ENST00000439717 MRIQ9BWK5 157 aa14.52□□□□□ -0.09
HSPG2-206ENST00000439717 SERPINA10Q9UK55 444 aa14.52□□□□□ -0.09
HSPG2-206ENST00000439717 TTF2Q9UNY4 1162 aaKnown RBP14.52□□□□□ -0.09
HSPG2-206ENST00000439717 PCDHB15Q9Y5E8 787 aa14.52□□□□□ -0.09
HSPG2-206ENST00000439717 COL1A1P02452 1464 aaPredicted RBP14.51□□□□□ -0.09
HSPG2-206ENST00000439717 WNT10BO00744 389 aa14.51□□□□□ -0.09
HSPG2-206ENST00000439717 RASGRF1Q13972 1273 aa14.51□□□□□ -0.09
HSPG2-206ENST00000439717 CFAP100Q494V2 611 aa14.51□□□□□ -0.09
HSPG2-206ENST00000439717 ZNF512BQ96KM6 892 aaPredicted RBP14.51□□□□□ -0.09
HSPG2-206ENST00000439717 DBNDD2Q9BQY9 259 aa14.51□□□□□ -0.09
HSPG2-206ENST00000439717 DCTPP1Q9H773 170 aa14.51□□□□□ -0.09
HSPG2-206ENST00000439717 NBPF9Q3BBW0 867 aa14.5□□□□□ -0.09
HSPG2-206ENST00000439717 TTC39AQ5SRH9 613 aa14.5□□□□□ -0.09
HSPG2-206ENST00000439717 ANGEL2Q5VTE6 544 aaKnown RBP14.5□□□□□ -0.09
HSPG2-206ENST00000439717 AACSQ86V21 672 aa14.5□□□□□ -0.09
HSPG2-206ENST00000439717 CCDC8Q9H0W5 538 aaPredicted RBP14.5□□□□□ -0.09
HSPG2-206ENST00000439717 GGA3Q9NZ52 723 aa14.5□□□□□ -0.09
HSPG2-206ENST00000439717 DBNLQ9UJU6 430 aaKnown RBP14.5□□□□□ -0.09
HSPG2-206ENST00000439717 MYH13Q9UKX3 1938 aa14.5□□□□□ -0.09
HSPG2-206ENST00000439717 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 APBB1O00213 710 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 MYO1BO43795 1136 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 GRIK5Q16478 980 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 SPTY2D1Q68D10 685 aaPredicted RBP14.49□□□□□ -0.09
HSPG2-206ENST00000439717 KRT26Q7Z3Y9 468 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 SULF1Q8IWU6 871 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 SPATA5Q8NB90 893 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 TEKT1Q969V4 418 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 GLIS2Q9BZE0 524 aaPredicted RBP14.49□□□□□ -0.09
HSPG2-206ENST00000439717 LRRCC1Q9C099 1032 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 IL1RAPL2Q9NP60 686 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms