RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ERVV-1B6SEH8 477 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 SRGAP3O43295 1099 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 IGKV5-2P06315 115 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 HSP90B1P14625 803 aaKnown RBP4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 ABL2P42684 1182 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 SIK1P57059 783 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 TCIRG1Q13488 830 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 CWF19L2Q2TBE0 894 aaKnown RBP4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 BMP2KLQ5H9B9 411 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 PLA2G2CQ5R387 149 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 ZNF772Q68DY9 489 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 ERC1Q8IUD2 1116 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 ACSBG1Q96GR2 724 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 LRRCC1Q9C099 1032 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 LNPKQ9C0E8 428 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 CCDC87Q9NVE4 849 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 NOP58Q9Y2X3 529 aaKnown RBP4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 NHSQ6T4R5 1651 aa4.89□□□□□ -1.63
HMGB1P37-201ENST00000439613 ANKRD36CQ5JPF3 1778 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 NUP98P52948 1817 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 SBF2Q86WG5 1849 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 PNMA6EA0A0J9YXQ4 647 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 H7C1W4 665 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 APBB1O00213 710 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 SOCS7O14512 581 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 SURF6O75683 361 aaKnown RBP4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 CD2BP2O95400 341 aaKnown RBP4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 ANP32AP39687 249 aaKnown RBP4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 SLC19A1P41440 591 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 PIP4K2AP48426 406 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 RPIAP49247 311 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 EIF5P55010 431 aaKnown RBP4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 OS9Q13438 667 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 RC3H1Q5TC82 1133 aaKnown RBP4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 LIAT1Q6ZQX7 453 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 FAM196AQ6ZSG2 479 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 TTLL7Q6ZT98 887 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 SKAP1Q86WV1 359 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 SEPT12Q8IYM1 358 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 KIF1BPQ96EK5 621 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 SLC4A9Q96Q91 983 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 ISCA1Q9BUE6 129 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 UNC93B1Q9H1C4 597 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 UPF2Q9HAU5 1272 aaKnown RBP4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 RREB1Q92766 1687 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 MAP3K15Q6ZN16 1313 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 PALLDQ8WX93 1383 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 BTAF1O14981 1849 aa4.88□□□□□ -1.63
HMGB1P37-201ENST00000439613 COL5A3P25940 1745 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 ATP5J2-PTCD1G3V325 749 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 KCNQ2O43526 872 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 RAD21O60216 631 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 GPR37L1O60883 481 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 CRKLP46109 303 aaKnown RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 RBM6P78332 1123 aaKnown RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 G3BP1Q13283 466 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 RABL6Q3YEC7 729 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 LINC01559Q495D7 138 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 C8orf34Q49A92 452 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 INTS5Q6P9B9 1019 aaKnown RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 CASC1Q6TDU7 716 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 CLEC4GQ6UXB4 293 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 UBE3BQ7Z3V4 1068 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 DZIP3Q86Y13 1208 aaKnown RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 PLEKHM2Q8IWE5 1019 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 ARMC2Q8NEN0 867 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 GPATCH3Q96I76 525 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 ARXQ96QS3 562 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 PRKD2Q9BZL6 878 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 ZMYND15Q9H091 742 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 OSBPL3Q9H4L5 887 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 BICC1Q9H694 974 aaKnown RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 PRM3Q9NNZ6 103 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 COPRSQ9NQ92 184 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 STAP2Q9UGK3 403 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 EXOC6BQ9Y2D4 811 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 ZNF652Q9Y2D9 606 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 ZNF330Q9Y3S2 320 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 NDUFB9Q9Y6M9 179 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 AOX1Q06278 1338 aa4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 MYH14Q7Z406 1995 aaKnown RBP4.87□□□□□ -1.63
HMGB1P37-201ENST00000439613 MYH3P11055 1940 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 CDC45O75419 566 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 RGS20O76081 388 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 PCCAP05165 728 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 CASP7P55210 303 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 ITPK1Q13572 414 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 PARP10Q53GL7 1025 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 TTC22Q5TAA0 569 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 KRT27Q7Z3Y8 459 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 ZNF34Q8IZ26 560 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 CLASRPQ8N2M8 674 aaKnown RBP4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 ZBTB38Q8NAP3 1195 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 PNMA1Q8ND90 353 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 RHPN1Q8TCX5 695 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 BAP1Q92560 729 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 EMID1Q96A84 441 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 KAZALD1Q96I82 304 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 SUCLG2Q96I99 432 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 PLA2G12BQ9BX93 195 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms