RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 EVI5LQ96CN4 794 aa15.42■□□□□ 0.06
SCLT1-202ENST00000439369 ZNF277Q9NRM2 450 aaPredicted RBP15.42■□□□□ 0.06
SCLT1-202ENST00000439369 AKAP11Q9UKA4 1901 aa15.41■□□□□ 0.06
SCLT1-202ENST00000439369 ECE2O60344 883 aa15.41■□□□□ 0.06
SCLT1-202ENST00000439369 GSPT1P15170 499 aaKnown RBP15.41■□□□□ 0.06
SCLT1-202ENST00000439369 LMNB1P20700 586 aa15.41■□□□□ 0.06
SCLT1-202ENST00000439369 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
SCLT1-202ENST00000439369 GPR162Q16538 588 aa15.41■□□□□ 0.06
SCLT1-202ENST00000439369 LRRFIP1Q32MZ4 808 aaKnown RBP15.41■□□□□ 0.06
SCLT1-202ENST00000439369 NIM1KQ8IY84 436 aa15.41■□□□□ 0.06
SCLT1-202ENST00000439369 JDP2Q8WYK2 163 aa15.41■□□□□ 0.06
SCLT1-202ENST00000439369 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
SCLT1-202ENST00000439369 COL1A1P02452 1464 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-202ENST00000439369 ZAP70P43403 619 aa15.4■□□□□ 0.06
SCLT1-202ENST00000439369 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
SCLT1-202ENST00000439369 KBTBD3Q8NAB2 608 aa15.4■□□□□ 0.06
SCLT1-202ENST00000439369 DNAJC2Q99543 621 aaKnown RBP15.4■□□□□ 0.06
SCLT1-202ENST00000439369 ZNRF3Q9ULT6 936 aa15.4■□□□□ 0.06
SCLT1-202ENST00000439369 SUGT1Q9Y2Z0 365 aa15.4■□□□□ 0.06
SCLT1-202ENST00000439369 MYH13Q9UKX3 1938 aa15.39■□□□□ 0.05
SCLT1-202ENST00000439369 GOLIM4O00461 696 aa15.39■□□□□ 0.05
SCLT1-202ENST00000439369 CYP2E1P05181 493 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-202ENST00000439369 SDSP20132 328 aa15.39■□□□□ 0.05
SCLT1-202ENST00000439369 DOK7Q18PE1 504 aa15.39■□□□□ 0.05
SCLT1-202ENST00000439369 SPTY2D1Q68D10 685 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-202ENST00000439369 PELP1Q8IZL8 1130 aaKnown RBP15.39■□□□□ 0.05
SCLT1-202ENST00000439369 USP17L3A6NCW0 530 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 USP17L4A6NCW7 530 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 TRIM6-TRIM34B2RNG4 842 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 HIP1O00291 1037 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 RASSF7Q02833 373 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 USP17L1Q7RTZ2 530 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCLT1-202ENST00000439369 DBNDD1Q9H9R9 158 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 SNRKQ9NRH2 765 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 IQSEC3Q9UPP2 1182 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-202ENST00000439369 MYO3BQ8WXR4 1341 aa15.38■□□□□ 0.05
SCLT1-202ENST00000439369 ZFYP08048 801 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-202ENST00000439369 TTLL5Q6EMB2 1281 aa15.37■□□□□ 0.05
SCLT1-202ENST00000439369 PI16Q6UXB8 463 aa15.37■□□□□ 0.05
SCLT1-202ENST00000439369 PSME4Q14997 1843 aa15.37■□□□□ 0.05
SCLT1-202ENST00000439369 COL4A5P29400 1685 aa15.37■□□□□ 0.05
SCLT1-202ENST00000439369 ZC3H4Q9UPT8 1303 aaKnown RBP15.37■□□□□ 0.05
SCLT1-202ENST00000439369 DOCK2Q92608 1830 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 FZD9O00144 591 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 MMP14P50281 582 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 GTF2IP78347 998 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 MAP3K12Q12852 859 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
SCLT1-202ENST00000439369 TNIP1Q15025 636 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 DACT2Q5SW24 774 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 RILPL2Q969X0 211 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 FSD1Q9BTV5 496 aa15.36■□□□□ 0.05
SCLT1-202ENST00000439369 DICER1Q9UPY3 1922 aaKnown RBP15.36■□□□□ 0.05
SCLT1-202ENST00000439369 YDJCA8MPS7 323 aa15.35■□□□□ 0.05
SCLT1-202ENST00000439369 EIF5BO60841 1220 aaKnown RBP15.35■□□□□ 0.05
SCLT1-202ENST00000439369 CDC45O75419 566 aa15.35■□□□□ 0.05
SCLT1-202ENST00000439369 VIL1P09327 827 aaKnown RBP15.35■□□□□ 0.05
SCLT1-202ENST00000439369 PRELPP51888 382 aa15.35■□□□□ 0.05
SCLT1-202ENST00000439369 MFSD14BQ5SR56 506 aa15.35■□□□□ 0.05
SCLT1-202ENST00000439369 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
SCLT1-202ENST00000439369 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-202ENST00000439369 ANTXR1Q9H6X2 564 aa15.35■□□□□ 0.05
SCLT1-202ENST00000439369 PIH1D3Q9NQM4 214 aaKnown RBP15.35■□□□□ 0.05
SCLT1-202ENST00000439369 LRP2BPQ9P2M1 347 aa15.35■□□□□ 0.05
SCLT1-202ENST00000439369 MAST3O60307 1309 aa15.35■□□□□ 0.05
SCLT1-202ENST00000439369 MAST2Q6P0Q8 1798 aa15.34■□□□□ 0.05
SCLT1-202ENST00000439369 ZNF646O15015 1829 aaPredicted RBP15.34■□□□□ 0.05
SCLT1-202ENST00000439369 SBF1O95248 1867 aa15.34■□□□□ 0.05
SCLT1-202ENST00000439369 MAP4K4O95819 1239 aaPredicted RBP15.34■□□□□ 0.05
SCLT1-202ENST00000439369 LDHBP07195 334 aaKnown RBP15.34■□□□□ 0.05
SCLT1-202ENST00000439369 EIF6P56537 245 aaKnown RBP15.34■□□□□ 0.05
SCLT1-202ENST00000439369 CIAPIN1Q6FI81 312 aa15.34■□□□□ 0.05
SCLT1-202ENST00000439369 ERICH6Q7L0X2 663 aa15.34■□□□□ 0.05
SCLT1-202ENST00000439369 EDC3Q96F86 508 aaKnown RBP15.34■□□□□ 0.05
SCLT1-202ENST00000439369 ABCF2Q9UG63 623 aa15.34■□□□□ 0.05
SCLT1-202ENST00000439369 NDUFB9Q9Y6M9 179 aa15.34■□□□□ 0.05
SCLT1-202ENST00000439369 CHD4Q14839 1912 aa15.33■□□□□ 0.05
SCLT1-202ENST00000439369 AK9Q5TCS8 1911 aa15.33■□□□□ 0.05
SCLT1-202ENST00000439369 IDH1O75874 414 aaKnown RBP15.33■□□□□ 0.04
SCLT1-202ENST00000439369 RPS12P25398 132 aaKnown RBP15.33■□□□□ 0.04
SCLT1-202ENST00000439369 GSTO1P78417 241 aa15.33■□□□□ 0.04
SCLT1-202ENST00000439369 HDLBPQ00341 1268 aaKnown RBP15.33■□□□□ 0.04
SCLT1-202ENST00000439369 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
SCLT1-202ENST00000439369 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.04
SCLT1-202ENST00000439369 TBC1D9Q6ZT07 1266 aa15.33■□□□□ 0.04
SCLT1-202ENST00000439369 SLF2Q8IX21 1173 aa15.33■□□□□ 0.04
SCLT1-202ENST00000439369 AGBL3Q8NEM8 1001 aa15.33■□□□□ 0.04
SCLT1-202ENST00000439369 MRIQ9BWK5 157 aa15.33■□□□□ 0.04
SCLT1-202ENST00000439369 SCN9AQ15858 1988 aa15.33■□□□□ 0.04
SCLT1-202ENST00000439369 RNF113AO15541 343 aaKnown RBP15.32■□□□□ 0.04
SCLT1-202ENST00000439369 PDE6AP16499 860 aa15.32■□□□□ 0.04
SCLT1-202ENST00000439369 ADD2P35612 726 aa15.32■□□□□ 0.04
SCLT1-202ENST00000439369 CXCL9Q07325 125 aa15.32■□□□□ 0.04
SCLT1-202ENST00000439369 C9orf131Q5VYM1 1079 aa15.32■□□□□ 0.04
SCLT1-202ENST00000439369 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
SCLT1-202ENST00000439369 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
SCLT1-202ENST00000439369 RAI14Q9P0K7 980 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms