RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 LAMB4A4D0S4 1761 aa17.97■□□□□ 0.47
APP-208ENST00000439274 LTBP4Q8N2S1 1624 aa17.97■□□□□ 0.47
APP-208ENST00000439274 POLR3DP05423 398 aaPredicted RBP17.97■□□□□ 0.47
APP-208ENST00000439274 NCBP1Q09161 790 aaKnown RBP17.97■□□□□ 0.47
APP-208ENST00000439274 WASHC4Q2M389 1173 aa17.97■□□□□ 0.47
APP-208ENST00000439274 MRFAP1L1Q96HT8 127 aa17.97■□□□□ 0.47
APP-208ENST00000439274 SMTNL1A8MU46 457 aa17.97■□□□□ 0.47
APP-208ENST00000439274 U2AF2P26368 475 aaKnown RBP eCLIP17.97■□□□□ 0.47
APP-208ENST00000439274 ZNF592Q92610 1267 aa17.97■□□□□ 0.47
APP-208ENST00000439274 ANO10Q9NW15 660 aa17.97■□□□□ 0.47
APP-208ENST00000439274 PRDM4Q9UKN5 801 aa17.97■□□□□ 0.47
APP-208ENST00000439274 CLIC4Q9Y696 253 aa17.97■□□□□ 0.47
APP-208ENST00000439274 PKD1L3Q7Z443 1732 aa17.96■□□□□ 0.47
APP-208ENST00000439274 CPDO75976 1380 aa17.96■□□□□ 0.47
APP-208ENST00000439274 SCARF1Q14162 830 aa17.96■□□□□ 0.47
APP-208ENST00000439274 FMR1NBQ8N0W7 255 aaPredicted RBP17.96■□□□□ 0.47
APP-208ENST00000439274 NDUFA8P51970 172 aa17.96■□□□□ 0.47
APP-208ENST00000439274 MRPS27Q92552 414 aaKnown RBP17.96■□□□□ 0.47
APP-208ENST00000439274 ATL3Q6DD88 541 aa17.95■□□□□ 0.46
APP-208ENST00000439274 PI16Q6UXB8 463 aa17.95■□□□□ 0.46
APP-208ENST00000439274 CCDC191Q8NCU4 936 aa17.95■□□□□ 0.46
APP-208ENST00000439274 CEP126Q9P2H0 1117 aa17.95■□□□□ 0.46
APP-208ENST00000439274 ZNF330Q9Y3S2 320 aaPredicted RBP17.95■□□□□ 0.46
APP-208ENST00000439274 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
APP-208ENST00000439274 TTC39AQ5SRH9 613 aa17.95■□□□□ 0.46
APP-208ENST00000439274 GORABQ5T7V8 394 aa17.95■□□□□ 0.46
APP-208ENST00000439274 SDF4Q9BRK5 362 aa17.95■□□□□ 0.46
APP-208ENST00000439274 RTEL1Q9NZ71 1219 aa17.95■□□□□ 0.46
APP-208ENST00000439274 NUP188Q5SRE5 1749 aa17.94■□□□□ 0.46
APP-208ENST00000439274 KLF18A0A0U1RQI7 1052 aa17.94■□□□□ 0.46
APP-208ENST00000439274 PRC1O43663 620 aa17.94■□□□□ 0.46
APP-208ENST00000439274 FGAP02671 866 aa17.94■□□□□ 0.46
APP-208ENST00000439274 SKILP12757 684 aa17.94■□□□□ 0.46
APP-208ENST00000439274 CEP57L1Q8IYX8 460 aa17.94■□□□□ 0.46
APP-208ENST00000439274 XAGE2Q96GT9 111 aa17.94■□□□□ 0.46
APP-208ENST00000439274 NWD2Q9ULI1 1742 aa17.94■□□□□ 0.46
APP-208ENST00000439274 GOLGA8BA8MQT2 603 aa17.94■□□□□ 0.46
APP-208ENST00000439274 CIAO1O76071 339 aa17.94■□□□□ 0.46
APP-208ENST00000439274 LINC00301Q8NCQ3 95 aa17.94■□□□□ 0.46
APP-208ENST00000439274 C8orf76Q96K31 380 aa17.94■□□□□ 0.46
APP-208ENST00000439274 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
APP-208ENST00000439274 TAOK2Q9UL54 1235 aa17.94■□□□□ 0.46
APP-208ENST00000439274 HPS5Q9UPZ3 1129 aa17.94■□□□□ 0.46
APP-208ENST00000439274 STK38Q15208 465 aa17.93■□□□□ 0.46
APP-208ENST00000439274 SF3A1Q15459 793 aaKnown RBP17.93■□□□□ 0.46
APP-208ENST00000439274 CEP135Q66GS9 1140 aa17.93■□□□□ 0.46
APP-208ENST00000439274 ADALQ6DHV7 355 aa17.93■□□□□ 0.46
APP-208ENST00000439274 CCDC112Q8NEF3 446 aa17.93■□□□□ 0.46
APP-208ENST00000439274 TRMT1Q9NXH9 659 aaKnown RBP17.93■□□□□ 0.46
APP-208ENST00000439274 ROBO1Q9Y6N7 1651 aa17.93■□□□□ 0.46
APP-208ENST00000439274 ZAP70P43403 619 aa17.93■□□□□ 0.46
APP-208ENST00000439274 CCZ1BP86790 482 aa17.93■□□□□ 0.46
APP-208ENST00000439274 CCZ1P86791 482 aaPredicted RBP17.93■□□□□ 0.46
APP-208ENST00000439274 IMMTQ16891 758 aaKnown RBP17.93■□□□□ 0.46
APP-208ENST00000439274 DPCR1Q3MIW9 517 aa17.93■□□□□ 0.46
APP-208ENST00000439274 CCDC158Q5M9N0 1113 aa17.93■□□□□ 0.46
APP-208ENST00000439274 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
APP-208ENST00000439274 EVCP57679 992 aa17.92■□□□□ 0.46
APP-208ENST00000439274 ANTXR2P58335 489 aa17.92■□□□□ 0.46
APP-208ENST00000439274 RBM6P78332 1123 aaKnown RBP17.92■□□□□ 0.46
APP-208ENST00000439274 CCDC57Q2TAC2 916 aa17.92■□□□□ 0.46
APP-208ENST00000439274 ORC3Q9UBD5 711 aaPredicted RBP17.92■□□□□ 0.46
APP-208ENST00000439274 BIN1O00499 593 aa17.92■□□□□ 0.46
APP-208ENST00000439274 ZSCAN20P17040 1043 aaPredicted RBP17.92■□□□□ 0.46
APP-208ENST00000439274 MB21D2Q8IYB1 491 aaPredicted RBP17.92■□□□□ 0.46
APP-208ENST00000439274 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
APP-208ENST00000439274 DENND2AQ9ULE3 1009 aa17.92■□□□□ 0.46
APP-208ENST00000439274 PAXBP1Q9Y5B6 917 aa17.92■□□□□ 0.46
APP-208ENST00000439274 NBPF11Q86T75 865 aa17.91■□□□□ 0.46
APP-208ENST00000439274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.91■□□□□ 0.46
APP-208ENST00000439274 NEDD4P46934 1319 aa17.91■□□□□ 0.46
APP-208ENST00000439274 FBXO18Q8NFZ0 1043 aa17.91■□□□□ 0.46
APP-208ENST00000439274 NKX2-3Q8TAU0 364 aa17.91■□□□□ 0.46
APP-208ENST00000439274 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
APP-208ENST00000439274 ATG3Q9NT62 314 aa17.91■□□□□ 0.46
APP-208ENST00000439274 CTNNA3Q9UI47 895 aa17.91■□□□□ 0.46
APP-208ENST00000439274 A0A1W2PQ27 194 aa17.9■□□□□ 0.46
APP-208ENST00000439274 A0A1W2PQ64 194 aa17.9■□□□□ 0.46
APP-208ENST00000439274 A0A1W2PQD8 194 aa17.9■□□□□ 0.46
APP-208ENST00000439274 MYSM1Q5VVJ2 828 aa17.9■□□□□ 0.46
APP-208ENST00000439274 FBXL16Q8N461 479 aa17.9■□□□□ 0.46
APP-208ENST00000439274 KIAA1468Q9P260 1216 aa17.9■□□□□ 0.46
APP-208ENST00000439274 KCPQ6ZWJ8 1503 aa17.9■□□□□ 0.46
APP-208ENST00000439274 PCDH11XQ9BZA7 1347 aa17.9■□□□□ 0.46
APP-208ENST00000439274 PCDH11YQ9BZA8 1340 aa17.9■□□□□ 0.46
APP-208ENST00000439274 SPTLC2O15270 562 aa17.9■□□□□ 0.46
APP-208ENST00000439274 TOM1L2Q6ZVM7 507 aa17.9■□□□□ 0.46
APP-208ENST00000439274 NAT10Q9H0A0 1025 aaKnown RBP17.9■□□□□ 0.46
APP-208ENST00000439274 CPLX1O14810 134 aa17.89■□□□□ 0.45
APP-208ENST00000439274 NEMFO60524 1076 aa17.89■□□□□ 0.45
APP-208ENST00000439274 NYAP1Q6ZVC0 841 aa17.89■□□□□ 0.45
APP-208ENST00000439274 TICAM2Q86XR7 235 aa17.89■□□□□ 0.45
APP-208ENST00000439274 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
APP-208ENST00000439274 AIFM3Q96NN9 605 aa17.89■□□□□ 0.45
APP-208ENST00000439274 SPEF2Q9C093 1822 aa17.89■□□□□ 0.45
APP-208ENST00000439274 GPAA1O43292 621 aa17.89■□□□□ 0.45
APP-208ENST00000439274 PTPN14Q15678 1187 aa17.89■□□□□ 0.45
APP-208ENST00000439274 ISM2Q6H9L7 571 aa17.89■□□□□ 0.45
APP-208ENST00000439274 KCNG4Q8TDN1 519 aa17.89■□□□□ 0.45
APP-208ENST00000439274 ISCA1Q9BUE6 129 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms