RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 THEGQ9P2T0 379 aa15.09■□□□□ 0.01
RTN4-211ENST00000438462 MGAMO43451 1857 aa15.09■□□□□ 0.01
RTN4-211ENST00000438462 INHAP05111 366 aa15.08■□□□□ 0
RTN4-211ENST00000438462 IREB2P48200 963 aaKnown RBP15.08■□□□□ 0
RTN4-211ENST00000438462 PARP10Q53GL7 1025 aa15.08■□□□□ 0
RTN4-211ENST00000438462 TMEM31Q5JXX7 168 aa15.08■□□□□ 0
RTN4-211ENST00000438462 ANKRD13AQ8IZ07 590 aa15.08■□□□□ 0
RTN4-211ENST00000438462 UTP14AQ9BVJ6 771 aaKnown RBP15.08■□□□□ 0
RTN4-211ENST00000438462 IL27Q8NEV9 243 aa15.07■□□□□ 0
RTN4-211ENST00000438462 DEFB129Q9H1M3 183 aa15.07■□□□□ 0
RTN4-211ENST00000438462 ECM29Q5VYK3 1845 aa15.06■□□□□ 0
RTN4-211ENST00000438462 USP17L3A6NCW0 530 aa15.06■□□□□ 0
RTN4-211ENST00000438462 USP17L4A6NCW7 530 aa15.06■□□□□ 0
RTN4-211ENST00000438462 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
RTN4-211ENST00000438462 GTF2A2P52657 109 aa15.06■□□□□ 0
RTN4-211ENST00000438462 USP17L1Q7RTZ2 530 aa15.06■□□□□ 0
RTN4-211ENST00000438462 OGFOD1Q8N543 542 aa15.06■□□□□ 0
RTN4-211ENST00000438462 CELF1Q92879 486 aaKnown RBP15.06■□□□□ 0
RTN4-211ENST00000438462 NBPF3Q9H094 633 aa15.06■□□□□ 0
RTN4-211ENST00000438462 EPHX3Q9H6B9 360 aa15.06■□□□□ 0
RTN4-211ENST00000438462 C11orf49Q9H6J7 331 aa15.06■□□□□ 0
RTN4-211ENST00000438462 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
RTN4-211ENST00000438462 ELNP15502 786 aa15.05■□□□□ -0
RTN4-211ENST00000438462 ANKLE1Q8NAG6 615 aa15.05■□□□□ -0
RTN4-211ENST00000438462 HELBQ8NG08 1087 aaPredicted RBP15.05■□□□□ -0
RTN4-211ENST00000438462 MXD3Q9BW11 206 aa15.05■□□□□ -0
RTN4-211ENST00000438462 CPA4Q9UI42 421 aa15.05■□□□□ -0
RTN4-211ENST00000438462 TCF20Q9UGU0 1960 aaKnown RBP15.04■□□□□ -0
RTN4-211ENST00000438462 ADCY3O60266 1144 aa15.04■□□□□ -0
RTN4-211ENST00000438462 USP2O75604 605 aaPredicted RBP15.04■□□□□ -0
RTN4-211ENST00000438462 UFL1O94874 794 aa15.04■□□□□ -0
RTN4-211ENST00000438462 MRPS5P82675 430 aaKnown RBP15.04■□□□□ -0
RTN4-211ENST00000438462 CDCA8Q53HL2 280 aa15.04■□□□□ -0
RTN4-211ENST00000438462 C17orf99Q6UX52 265 aa15.04■□□□□ -0
RTN4-211ENST00000438462 GIGYF2Q6Y7W6 1299 aaKnown RBP15.04■□□□□ -0
RTN4-211ENST00000438462 GABRQQ9UN88 632 aa15.04■□□□□ -0
RTN4-211ENST00000438462 PODNQ7Z5L7 613 aa15.03■□□□□ -0
RTN4-211ENST00000438462 PPM1EQ8WY54 764 aa15.03■□□□□ -0
RTN4-211ENST00000438462 LTBP2Q14767 1821 aa15.03■□□□□ -0
RTN4-211ENST00000438462 BTBD19C9JJ37 291 aa15.02■□□□□ -0
RTN4-211ENST00000438462 ZCCHC17Q9NP64 241 aaKnown RBP15.02■□□□□ -0
RTN4-211ENST00000438462 PFASO15067 1338 aa15.01□□□□□ -0.01
RTN4-211ENST00000438462 FAM86C2PA6NEL3 165 aa15.01□□□□□ -0.01
RTN4-211ENST00000438462 NBPF12Q5TAG4 269 aaPredicted RBP15.01□□□□□ -0.01
RTN4-211ENST00000438462 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.01□□□□□ -0.014e-7■■■■■ 30.7
RTN4-211ENST00000438462 PPP2R3BQ9Y5P8 575 aa15.01□□□□□ -0.01
RTN4-211ENST00000438462 MAST2Q6P0Q8 1798 aa15.01□□□□□ -0.01
RTN4-211ENST00000438462 SMAD3P84022 425 aaKnown RBP15□□□□□ -0.01
RTN4-211ENST00000438462 SUPT20HL1Q3ZLR7 823 aa15□□□□□ -0.01
RTN4-211ENST00000438462 FBXW7Q969H0 707 aa15□□□□□ -0.01
RTN4-211ENST00000438462 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
RTN4-211ENST00000438462 C11orf16Q9NQ32 467 aa15□□□□□ -0.01
RTN4-211ENST00000438462 MYL6BP14649 208 aa14.99□□□□□ -0.01
RTN4-211ENST00000438462 NHLH1Q02575 133 aa14.99□□□□□ -0.01
RTN4-211ENST00000438462 GRIN2CQ14957 1233 aa14.99□□□□□ -0.01
RTN4-211ENST00000438462 DACT2Q5SW24 774 aa14.99□□□□□ -0.01
RTN4-211ENST00000438462 ZBED3Q96IU2 234 aaPredicted RBP14.99□□□□□ -0.01
RTN4-211ENST00000438462 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
RTN4-211ENST00000438462 COL3A1P02461 1466 aaPredicted RBP14.99□□□□□ -0.01
RTN4-211ENST00000438462 MYO3BQ8WXR4 1341 aa14.98□□□□□ -0.01
RTN4-211ENST00000438462 FCGRTP55899 365 aa14.98□□□□□ -0.01
RTN4-211ENST00000438462 FOXK2Q01167 660 aa14.98□□□□□ -0.01
RTN4-211ENST00000438462 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
RTN4-211ENST00000438462 PODXL2Q9NZ53 605 aa14.98□□□□□ -0.01
RTN4-211ENST00000438462 GGA1Q9UJY5 639 aa14.98□□□□□ -0.01
RTN4-211ENST00000438462 ZNF804BA4D1E1 1349 aa14.97□□□□□ -0.01
RTN4-211ENST00000438462 FLT3LGP49771 235 aa14.97□□□□□ -0.01
RTN4-211ENST00000438462 VGLL4Q14135 290 aa14.97□□□□□ -0.01
RTN4-211ENST00000438462 SHHQ15465 462 aa14.97□□□□□ -0.01
RTN4-211ENST00000438462 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.97□□□□□ -0.01
RTN4-211ENST00000438462 PXYLP1Q8TE99 480 aa14.97□□□□□ -0.01
RTN4-211ENST00000438462 ANKIB1Q9P2G1 1089 aa14.97□□□□□ -0.01
RTN4-211ENST00000438462 SH3TC1Q8TE82 1336 aa14.96□□□□□ -0.01
RTN4-211ENST00000438462 GPR37L1O60883 481 aa14.96□□□□□ -0.01
RTN4-211ENST00000438462 CETPP11597 493 aa14.96□□□□□ -0.01
RTN4-211ENST00000438462 LRRC26Q2I0M4 334 aa14.96□□□□□ -0.01
RTN4-211ENST00000438462 C9orf50Q5SZB4 431 aa14.96□□□□□ -0.01
RTN4-211ENST00000438462 POTEEQ6S8J3 1075 aa14.96□□□□□ -0.01
RTN4-211ENST00000438462 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
RTN4-211ENST00000438462 ZBTB38Q8NAP3 1195 aaPredicted RBP14.95□□□□□ -0.02
RTN4-211ENST00000438462 XIRP2A4UGR9 3374 aa14.95□□□□□ -0.02
RTN4-211ENST00000438462 TRMT112Q9UI30 125 aaKnown RBP14.94□□□□□ -0.02
RTN4-211ENST00000438462 TAOK2Q9UL54 1235 aa14.94□□□□□ -0.02
RTN4-211ENST00000438462 CLRN2A0PK11 232 aa14.93□□□□□ -0.02
RTN4-211ENST00000438462 NLRP10Q86W26 655 aa14.93□□□□□ -0.02
RTN4-211ENST00000438462 SPDYE5A6NIY4 337 aa14.92□□□□□ -0.02
RTN4-211ENST00000438462 MORC1Q86VD1 984 aa14.92□□□□□ -0.02
RTN4-211ENST00000438462 ZNF428Q96B54 188 aa14.92□□□□□ -0.02
RTN4-211ENST00000438462 VEZTQ9HBM0 779 aa14.92□□□□□ -0.02
RTN4-211ENST00000438462 CSADQ9Y600 493 aa14.92□□□□□ -0.02
RTN4-211ENST00000438462 DNAH12Q6ZR08 3092 aa14.91□□□□□ -0.02
RTN4-211ENST00000438462 SMIM22K7EJ46 135 aa14.91□□□□□ -0.02
RTN4-211ENST00000438462 BMP1P13497 986 aa14.91□□□□□ -0.02
RTN4-211ENST00000438462 MMP14P50281 582 aa14.91□□□□□ -0.02
RTN4-211ENST00000438462 SNAPC2Q13487 334 aa14.91□□□□□ -0.02
RTN4-211ENST00000438462 IRF5Q13568 498 aa14.91□□□□□ -0.02
RTN4-211ENST00000438462 MTMR14Q8NCE2 650 aa14.91□□□□□ -0.02
RTN4-211ENST00000438462 PCDHAC2Q9Y5I4 1007 aa14.91□□□□□ -0.02
RTN4-211ENST00000438462 ARAP2Q8WZ64 1704 aa14.9□□□□□ -0.02
RTN4-211ENST00000438462 RPS8P62241 208 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms