RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 NECAB1Q8N987 351 aa30.51■■■□□ 2.47
CPNE1-216ENST00000437340 PUS7LQ9H0K6 701 aaKnown RBP30.51■■■□□ 2.47
CPNE1-216ENST00000437340 ATP6V1DQ9Y5K8 247 aa30.5■■■□□ 2.47
CPNE1-216ENST00000437340 E7EWF7 191 aa30.49■■■□□ 2.47
CPNE1-216ENST00000437340 ZNF827Q17R98 1081 aa30.49■■■□□ 2.47
CPNE1-216ENST00000437340 Q6ZUG5 572 aa30.49■■■□□ 2.47
CPNE1-216ENST00000437340 PIH1D3Q9NQM4 214 aaKnown RBP30.49■■■□□ 2.47
CPNE1-216ENST00000437340 SLC9C2Q5TAH2 1124 aa30.49■■■□□ 2.47
CPNE1-216ENST00000437340 SPATA5Q8NB90 893 aa30.49■■■□□ 2.47
CPNE1-216ENST00000437340 GPAA1O43292 621 aa30.48■■■□□ 2.47
CPNE1-216ENST00000437340 PDCP20941 246 aa30.48■■■□□ 2.47
CPNE1-216ENST00000437340 HMGB2P26583 209 aaKnown RBP30.48■■■□□ 2.47
CPNE1-216ENST00000437340 EXOSC10Q01780 885 aaKnown RBP30.48■■■□□ 2.47
CPNE1-216ENST00000437340 CHRNDQ07001 517 aa30.48■■■□□ 2.47
CPNE1-216ENST00000437340 BICDL1Q6ZP65 573 aa30.48■■■□□ 2.47
CPNE1-216ENST00000437340 ANKRD18AQ8IVF6 992 aa30.48■■■□□ 2.47
CPNE1-216ENST00000437340 AGXT2Q9BYV1 514 aa30.48■■■□□ 2.47
CPNE1-216ENST00000437340 FOXP2O15409 715 aa30.47■■■□□ 2.47
CPNE1-216ENST00000437340 IMMTQ16891 758 aaKnown RBP30.47■■■□□ 2.47
CPNE1-216ENST00000437340 SETDB2Q96T68 719 aa30.47■■■□□ 2.47
CPNE1-216ENST00000437340 F13A1P00488 732 aa30.46■■■□□ 2.47
CPNE1-216ENST00000437340 GTF2E1P29083 439 aaPredicted RBP30.46■■■□□ 2.47
CPNE1-216ENST00000437340 AKT1S1Q96B36 256 aa30.46■■■□□ 2.47
CPNE1-216ENST00000437340 MBD3O95983 291 aa30.46■■■□□ 2.47
CPNE1-216ENST00000437340 FBXL16Q8N461 479 aa30.46■■■□□ 2.47
CPNE1-216ENST00000437340 GTF3C6Q969F1 213 aa30.46■■■□□ 2.47
CPNE1-216ENST00000437340 BSDC1Q9NW68 430 aaPredicted RBP30.46■■■□□ 2.47
CPNE1-216ENST00000437340 IDH1O75874 414 aaKnown RBP30.45■■■□□ 2.46
CPNE1-216ENST00000437340 FGAP02671 866 aa30.45■■■□□ 2.46
CPNE1-216ENST00000437340 RASGRF1Q13972 1273 aa30.45■■■□□ 2.46
CPNE1-216ENST00000437340 MTMR6Q9Y217 621 aa30.45■■■□□ 2.46
CPNE1-216ENST00000437340 PDE6AP16499 860 aa30.44■■■□□ 2.46
CPNE1-216ENST00000437340 FGD1P98174 961 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 EN1Q05925 392 aaPredicted RBP30.43■■■□□ 2.46
CPNE1-216ENST00000437340 TMEM87AQ8NBN3 555 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 CHAMP1Q96JM3 812 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 CAMKK2Q96RR4 588 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 EZH2Q15910 746 aaKnown RBP30.43■■■□□ 2.46
CPNE1-216ENST00000437340 TTLL5Q6EMB2 1281 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 C3orf67Q6ZVT6 689 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 BRF1Q92994 677 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 ZNF532Q9HCE3 1301 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 LAMA4Q16363 1823 aa30.43■■■□□ 2.46
CPNE1-216ENST00000437340 TCRBV5S4A2TA0A5A2 114 aa30.42■■■□□ 2.46
CPNE1-216ENST00000437340 MRE11P49959 708 aa30.42■■■□□ 2.46
CPNE1-216ENST00000437340 MAP3K12Q12852 859 aa30.42■■■□□ 2.46
CPNE1-216ENST00000437340 UBE4AQ14139 1066 aa30.42■■■□□ 2.46
CPNE1-216ENST00000437340 GPT2Q8TD30 523 aa30.42■■■□□ 2.46
CPNE1-216ENST00000437340 SNAP23O00161 211 aa30.41■■■□□ 2.46
CPNE1-216ENST00000437340 LARP1BQ659C4 914 aaKnown RBP30.41■■■□□ 2.46
CPNE1-216ENST00000437340 TPTE2Q6XPS3 522 aa30.41■■■□□ 2.46
CPNE1-216ENST00000437340 NBPF5PQ86XG9 351 aaPredicted RBP30.41■■■□□ 2.46
CPNE1-216ENST00000437340 TFCP2L1Q9NZI6 479 aa30.41■■■□□ 2.46
CPNE1-216ENST00000437340 NLRP3Q96P20 1036 aa30.41■■■□□ 2.46
CPNE1-216ENST00000437340 A0A0G2JLW4 131 aa30.4■■■□□ 2.46
CPNE1-216ENST00000437340 PFKFB2O60825 505 aa30.4■■■□□ 2.46
CPNE1-216ENST00000437340 CHMP4CQ96CF2 233 aa30.4■■■□□ 2.46
CPNE1-216ENST00000437340 LLPHQ9BRT6 129 aaKnown RBP30.4■■■□□ 2.46
CPNE1-216ENST00000437340 WWC3Q9ULE0 1092 aa30.4■■■□□ 2.46
CPNE1-216ENST00000437340 DOCK2Q92608 1830 aa30.4■■■□□ 2.46
CPNE1-216ENST00000437340 GYS1P13807 737 aa30.39■■■□□ 2.46
CPNE1-216ENST00000437340 NCLP19338 710 aaKnown RBP30.39■■■□□ 2.46
CPNE1-216ENST00000437340 BCAMP50895 628 aa30.39■■■□□ 2.46
CPNE1-216ENST00000437340 ZNF804BA4D1E1 1349 aa30.39■■■□□ 2.45
CPNE1-216ENST00000437340 STK3Q13188 491 aa30.38■■■□□ 2.45
CPNE1-216ENST00000437340 CAVIN1Q6NZI2 390 aaKnown RBP30.38■■■□□ 2.45
CPNE1-216ENST00000437340 COL4A1P02462 1669 aa30.38■■■□□ 2.45
CPNE1-216ENST00000437340 ZNF213O14771 459 aa30.38■■■□□ 2.45
CPNE1-216ENST00000437340 ZNF445P59923 1031 aa30.38■■■□□ 2.45
CPNE1-216ENST00000437340 ZMYM6O95789 1325 aa30.37■■■□□ 2.45
CPNE1-216ENST00000437340 NFIXQ14938 502 aa30.37■■■□□ 2.45
CPNE1-216ENST00000437340 LRRC2Q9BYS8 371 aa30.37■■■□□ 2.45
CPNE1-216ENST00000437340 MINPP1Q9UNW1 487 aa30.37■■■□□ 2.45
CPNE1-216ENST00000437340 WDR19Q8NEZ3 1342 aa30.36■■■□□ 2.45
CPNE1-216ENST00000437340 AIDAQ96BJ3 306 aa30.36■■■□□ 2.45
CPNE1-216ENST00000437340 ZNF274Q96GC6 653 aaPredicted RBP30.36■■■□□ 2.45
CPNE1-216ENST00000437340 GNL3LQ9NVN8 582 aaKnown RBP30.36■■■□□ 2.45
CPNE1-216ENST00000437340 XRCC6P12956 609 aaKnown RBP eCLIP30.36■■■□□ 2.45
CPNE1-216ENST00000437340 EVCP57679 992 aa30.36■■■□□ 2.45
CPNE1-216ENST00000437340 SF3B2Q13435 895 aaKnown RBP30.36■■■□□ 2.45
CPNE1-216ENST00000437340 ALX1Q15699 326 aa30.36■■■□□ 2.45
CPNE1-216ENST00000437340 STRBPQ96SI9 672 aaKnown RBP30.36■■■□□ 2.45
CPNE1-216ENST00000437340 CARMIL3Q8ND23 1372 aa30.35■■■□□ 2.45
CPNE1-216ENST00000437340 VPS37CA5D8V6 355 aaPredicted RBP30.35■■■□□ 2.45
CPNE1-216ENST00000437340 USP48Q86UV5 1035 aa30.35■■■□□ 2.45
CPNE1-216ENST00000437340 COL23A1Q86Y22 540 aaPredicted RBP30.35■■■□□ 2.45
CPNE1-216ENST00000437340 NCOA7Q8NI08 942 aa30.35■■■□□ 2.45
CPNE1-216ENST00000437340 GRPEL1Q9HAV7 217 aa30.35■■■□□ 2.45
CPNE1-216ENST00000437340 QSER1Q2KHR3 1735 aa30.35■■■□□ 2.45
CPNE1-216ENST00000437340 MYO5AQ9Y4I1 1855 aaKnown RBP30.35■■■□□ 2.45
CPNE1-216ENST00000437340 A0A1B0GUL6 1792 aa30.34■■■□□ 2.45
CPNE1-216ENST00000437340 MCM5P33992 734 aa30.34■■■□□ 2.45
CPNE1-216ENST00000437340 RPS8P62241 208 aaKnown RBP30.34■■■□□ 2.45
CPNE1-216ENST00000437340 SCRN1Q12765 414 aa30.34■■■□□ 2.45
CPNE1-216ENST00000437340 CSPP1Q1MSJ5 1256 aa30.34■■■□□ 2.45
CPNE1-216ENST00000437340 ZSCAN23Q3MJ62 389 aa30.34■■■□□ 2.45
CPNE1-216ENST00000437340 MAGEB6Q8N7X4 407 aa30.34■■■□□ 2.45
CPNE1-216ENST00000437340 SMARCC2Q8TAQ2 1214 aa30.34■■■□□ 2.45
CPNE1-216ENST00000437340 CELF1Q92879 486 aaKnown RBP30.34■■■□□ 2.45
CPNE1-216ENST00000437340 BAG6P46379 1132 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms