RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CFAP45Q9UL16 551 aa12.21□□□□□ -0.46
CLSTN1-203ENST00000435891 PAPPAQ13219 1627 aa12.21□□□□□ -0.46
CLSTN1-203ENST00000435891 KIF20AO95235 890 aa12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 C11orf57Q6ZUT1 292 aaPredicted RBP12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 CCAR1Q8IX12 1150 aaKnown RBP12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 TOGARAM1Q9Y4F4 1720 aa12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 CCDC158Q5M9N0 1113 aa12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 CCDC186Q7Z3E2 898 aa12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 GTPBP4Q9BZE4 634 aaKnown RBP12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 CARMIL3Q8ND23 1372 aa12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 HMGN5P82970 282 aaKnown RBP12.2□□□□□ -0.46
CLSTN1-203ENST00000435891 ANTXR2P58335 489 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 ZNF274Q96GC6 653 aaPredicted RBP12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 GREM2Q9H772 168 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 MCAMP43121 646 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 EVA1CP58658 441 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 TDRD7Q8NHU6 1098 aaKnown RBP12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 TRIM5Q9C035 493 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 TMEM51Q9NW97 253 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 CSF1RP07333 972 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 PLA2G4DQ86XP0 818 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 MYRIPQ8NFW9 859 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 SLAIN2Q9P270 581 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
CLSTN1-203ENST00000435891 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 ZNF75DP51815 510 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 IFIT5Q13325 482 aaKnown RBP12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 GPAA1O43292 621 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 PRC1O43663 620 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 POLR3DP05423 398 aaPredicted RBP12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 IQCB1Q15051 598 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 CCDC144BQ3MJ40 725 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 MB21D2Q8IYB1 491 aaPredicted RBP12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 ENGASEQ8NFI3 743 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 RIPOR2Q9Y4F9 1068 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 MYH15Q9Y2K3 1946 aa12.18□□□□□ -0.46
CLSTN1-203ENST00000435891 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 ME1P48163 572 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 TRIM28Q13263 835 aaKnown RBP12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 ITGA6P23229 1130 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 EVCP57679 992 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 IMMTQ16891 758 aaKnown RBP12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 DRC7Q8IY82 874 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 TTLL11Q8NHH1 800 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 APPBP2Q92624 585 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 AKAP2Q9Y2D5 859 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 METTL24Q5JXM2 366 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 LDHAL6AQ6ZMR3 332 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 CERS3Q8IU89 383 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 CLIC4Q9Y696 253 aa12.17□□□□□ -0.46
CLSTN1-203ENST00000435891 KIF6Q6ZMV9 814 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 A0A1B0GVL5 298 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 SNAP23O00161 211 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 GIGYF2Q6Y7W6 1299 aaKnown RBP12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 PLA2G12BQ9BX93 195 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 SPEF2Q9C093 1822 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 RXRAP19793 462 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 AIFM3Q96NN9 605 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 SENP2Q9HC62 589 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 MAP3K15Q6ZN16 1313 aa12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 ZNF335Q9H4Z2 1342 aaPredicted RBP12.16□□□□□ -0.46
CLSTN1-203ENST00000435891 GOLGA6L6A8MZA4 724 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 KIF28PB7ZC32 967 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 INCENPQ9NQS7 918 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 MYO5AQ9Y4I1 1855 aaKnown RBP12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 FBXL16Q8N461 479 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 PDCL2Q8N4E4 241 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 CACTINQ8WUQ7 758 aaKnown RBP12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 AKAP11Q9UKA4 1901 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 ZFYP08048 801 aaPredicted RBP12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 FAM160A1Q05DH4 1040 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 SLC9C2Q5TAH2 1124 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 CCDC73Q6ZRK6 1079 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
CLSTN1-203ENST00000435891 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms