RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 NMIQ13287 307 aaPredicted RBP12.36□□□□□ -0.43
NOD1-206ENST00000434755 ATL3Q6DD88 541 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 JDP2Q8WYK2 163 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
NOD1-206ENST00000434755 SEMA3EO15041 775 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 UBE2HP62256 183 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 GRIPAP1Q4V328 841 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 NLRP10Q86W26 655 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 SPC24Q8NBT2 197 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 IGSF3O75054 1194 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 MCM5P33992 734 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 TRMT1LQ7Z2T5 733 aaKnown RBP12.35□□□□□ -0.43
NOD1-206ENST00000434755 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 NECAB1Q8N987 351 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 SLIT3O75094 1523 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 H7C1W4 665 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 CYP7A1P22680 504 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 PROSER3Q2NL68 480 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 UVSSAQ2YD98 709 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 TTLL5Q6EMB2 1281 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 ZNF594Q96JF6 807 aaPredicted RBP12.35□□□□□ -0.43
NOD1-206ENST00000434755 NUP62CLQ9H1M0 184 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 SHPRHQ149N8 1683 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 RGS12O14924 1447 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 BBOX1O75936 387 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 CREB3L3Q68CJ9 461 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 CEP131Q9UPN4 1083 aa12.35□□□□□ -0.43
NOD1-206ENST00000434755 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 OFD1O75665 1012 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 SMC2O95347 1197 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 CTCFLQ8NI51 663 aaPredicted RBP12.34□□□□□ -0.43
NOD1-206ENST00000434755 NOL7Q9UMY1 257 aaKnown RBP12.34□□□□□ -0.43
NOD1-206ENST00000434755 CAMK4Q16566 473 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 BRF1Q92994 677 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 GJB2P29033 226 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 DACH1Q9UI36 760 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 LEMD3Q9Y2U8 911 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 SLC12A7Q9Y666 1083 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 AKAP12Q02952 1782 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 LDHBP07195 334 aaKnown RBP12.34□□□□□ -0.43
NOD1-206ENST00000434755 KBTBD3Q8NAB2 608 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 C8orf76Q96K31 380 aa12.34□□□□□ -0.43
NOD1-206ENST00000434755 COL15A1P39059 1388 aa12.33□□□□□ -0.43
NOD1-206ENST00000434755 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 CCDC96Q2M329 555 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 CHST3Q7LGC8 479 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 XAGE2Q96GT9 111 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 RIMBP2O15034 1052 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 WDR78Q5VTH9 848 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 NDUFB9Q9Y6M9 179 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 TNS2Q63HR2 1409 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.33□□□□□ -0.44
NOD1-206ENST00000434755 NAP1L1P55209 391 aaKnown RBP12.33□□□□□ -0.44
NOD1-206ENST00000434755 FNBP4Q8N3X1 1017 aaPredicted RBP12.33□□□□□ -0.44
NOD1-206ENST00000434755 MIGA1Q8NAN2 632 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
NOD1-206ENST00000434755 KIF5BP33176 963 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 APPBP2Q92624 585 aa12.33□□□□□ -0.44
NOD1-206ENST00000434755 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 UFL1O94874 794 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 TMEM67Q5HYA8 995 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 ESR2Q92731 530 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 ZNF76P36508 570 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
NOD1-206ENST00000434755 ISCA1Q9BUE6 129 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 FAM13BQ9NYF5 915 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 RFX7Q2KHR2 1363 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 EPS15P42566 896 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 KCNQ4P56696 695 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 DHX32Q7L7V1 743 aaKnown RBP12.32□□□□□ -0.44
NOD1-206ENST00000434755 MARCH10Q8NA82 808 aaPredicted RBP12.32□□□□□ -0.44
NOD1-206ENST00000434755 BRPF3Q9ULD4 1205 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
NOD1-206ENST00000434755 PXDNQ92626 1479 aa12.32□□□□□ -0.44
NOD1-206ENST00000434755 DTNBO60941 627 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 CABP5Q9NP86 173 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
NOD1-206ENST00000434755 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 GNAQP50148 359 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 SERPINB2P05120 415 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 NT5C2P49902 561 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 TTLL12Q14166 644 aaPredicted RBP12.31□□□□□ -0.44
NOD1-206ENST00000434755 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 DBNDD2Q9BQY9 259 aa12.31□□□□□ -0.44
NOD1-206ENST00000434755 CCP110O43303 1012 aa12.3□□□□□ -0.44
NOD1-206ENST00000434755 AK2P54819 239 aa12.3□□□□□ -0.44
NOD1-206ENST00000434755 CHMP4BP1P59074 171 aa12.3□□□□□ -0.44
NOD1-206ENST00000434755 HOOK2Q96ED9 719 aa12.3□□□□□ -0.44
NOD1-206ENST00000434755 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms