RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 UBE3BQ7Z3V4 1068 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 DBF4Q9UBU7 674 aaPredicted RBP12.17□□□□□ -0.46
SCAF4-203ENST00000434667 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 FAM160A1Q05DH4 1040 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.16□□□□□ -0.462e-7■■□□□ 11.4
SCAF4-203ENST00000434667 MED23Q9ULK4 1368 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 SMARCE1Q969G3 411 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 DESI2Q9BSY9 194 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 RCOR1Q9UKL0 485 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
SCAF4-203ENST00000434667 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
SCAF4-203ENST00000434667 STK38Q15208 465 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
SCAF4-203ENST00000434667 PXDNQ92626 1479 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 TRIM66O15016 1216 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 FDPSP14324 419 aaKnown RBP12.15□□□□□ -0.46
SCAF4-203ENST00000434667 SYCP1Q15431 976 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 SARM1Q6SZW1 724 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 LCMT1Q9UIC8 334 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 KIF28PB7ZC32 967 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 COPS6Q7L5N1 327 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 FMR1NBQ8N0W7 255 aaPredicted RBP12.15□□□□□ -0.46
SCAF4-203ENST00000434667 XAGE3Q8WTP9 111 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 FOXN1O15353 648 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 CDC25BP30305 580 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 KARSQ15046 597 aaKnown RBP12.15□□□□□ -0.46
SCAF4-203ENST00000434667 UBXN4Q92575 508 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 ZNF594Q96JF6 807 aaPredicted RBP12.15□□□□□ -0.46
SCAF4-203ENST00000434667 CLIC6Q96NY7 704 aa12.15□□□□□ -0.46
SCAF4-203ENST00000434667 H2AFXP16104 143 aaPredicted RBP12.14□□□□□ -0.47
SCAF4-203ENST00000434667 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 WDR24Q96S15 920 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 TMEM94Q12767 1356 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 PLCH1Q4KWH8 1693 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 COBLO75128 1261 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 PNOCQ13519 176 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 CFAP100Q494V2 611 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 NFATC2IPQ8NCF5 419 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
SCAF4-203ENST00000434667 ADKP55263 362 aaKnown RBP12.14□□□□□ -0.47
SCAF4-203ENST00000434667 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 CHMP4CQ96CF2 233 aa12.14□□□□□ -0.47
SCAF4-203ENST00000434667 SRRTQ9BXP5 876 aaKnown RBP12.14□□□□□ -0.47
SCAF4-203ENST00000434667 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 RREB1Q92766 1687 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 CCDC66A2RUB6 948 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 SERPINC1P01008 464 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 FANCCQ00597 558 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 MTX1Q13505 466 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 TNNI3KQ59H18 835 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 TOMM22Q9NS69 142 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 FPGT-TNNI3KV9GXZ4 949 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
SCAF4-203ENST00000434667 BMS1Q14692 1282 aaKnown RBP12.13□□□□□ -0.47
SCAF4-203ENST00000434667 SUGCTQ9HAC7 445 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 WDHD1O75717 1129 aaPredicted RBP12.13□□□□□ -0.47
SCAF4-203ENST00000434667 EVCP57679 992 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 ZSCAN16Q9H4T2 348 aaPredicted RBP12.13□□□□□ -0.47
SCAF4-203ENST00000434667 FAM53CQ9NYF3 392 aa12.13□□□□□ -0.47
SCAF4-203ENST00000434667 AFDNP55196 1824 aaKnown RBP12.13□□□□□ -0.47
SCAF4-203ENST00000434667 MROH7-TTC4A0A0A0MT08 1334 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 ZNF202O95125 648 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
SCAF4-203ENST00000434667 MTF1Q14872 753 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 NCAPHQ15003 741 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 TMCO3Q6UWJ1 677 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
SCAF4-203ENST00000434667 PLEKHA4Q9H4M7 779 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
SCAF4-203ENST00000434667 E7EWF7 191 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 OAS2P29728 719 aaKnown RBP12.12□□□□□ -0.47
SCAF4-203ENST00000434667 CYP2C19P33261 490 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 PPARDQ03181 441 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 RAD51AP2Q09MP3 1159 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 SMARCC2Q8TAQ2 1214 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 PFKFB2O60825 505 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 ALDH1L1O75891 902 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
SCAF4-203ENST00000434667 CCDC93Q567U6 631 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 DHX32Q7L7V1 743 aaKnown RBP12.12□□□□□ -0.47
SCAF4-203ENST00000434667 C10orf67Q8IYJ2 551 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 HSD3B7Q9H2F3 369 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 INCENPQ9NQS7 918 aa12.12□□□□□ -0.47
SCAF4-203ENST00000434667 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.12□□□□□ -0.47
SCAF4-203ENST00000434667 NEDD4P46934 1319 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 PATL2C9JE40 543 aaKnown RBP12.11□□□□□ -0.47
SCAF4-203ENST00000434667 HIP1O00291 1037 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 CDC27P30260 824 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
SCAF4-203ENST00000434667 TRIM65Q6PJ69 517 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 RNMTO43148 476 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms