RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 SCNN1DP51172 638 aa17.69■□□□□ 0.42
CSTF3-202ENST00000431742 GTF2IP78347 998 aa17.69■□□□□ 0.42
CSTF3-202ENST00000431742 RSBN1LQ6PCB5 846 aaPredicted RBP17.69■□□□□ 0.42
CSTF3-202ENST00000431742 AACSQ86V21 672 aa17.69■□□□□ 0.42
CSTF3-202ENST00000431742 CLASRPQ8N2M8 674 aaKnown RBP17.69■□□□□ 0.42
CSTF3-202ENST00000431742 ZNF784Q8NCA9 323 aaPredicted RBP17.69■□□□□ 0.42
CSTF3-202ENST00000431742 GMLQ99445 158 aa17.69■□□□□ 0.42
CSTF3-202ENST00000431742 IQSEC3Q9UPP2 1182 aaPredicted RBP17.69■□□□□ 0.42
CSTF3-202ENST00000431742 PDS5AQ29RF7 1337 aaKnown RBP17.69■□□□□ 0.42
CSTF3-202ENST00000431742 RPS12P25398 132 aaKnown RBP17.68■□□□□ 0.42
CSTF3-202ENST00000431742 ARID4AP29374 1257 aaPredicted RBP17.68■□□□□ 0.42
CSTF3-202ENST00000431742 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
CSTF3-202ENST00000431742 FKBP1AP62942 108 aaKnown RBP17.68■□□□□ 0.42
CSTF3-202ENST00000431742 TTLL5Q6EMB2 1281 aa17.68■□□□□ 0.42
CSTF3-202ENST00000431742 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
CSTF3-202ENST00000431742 CCDC8Q9H0W5 538 aaPredicted RBP17.68■□□□□ 0.42
CSTF3-202ENST00000431742 GNL3LQ9NVN8 582 aaKnown RBP17.68■□□□□ 0.42
CSTF3-202ENST00000431742 MYO3BQ8WXR4 1341 aa17.68■□□□□ 0.42
CSTF3-202ENST00000431742 SMARCA5O60264 1052 aaPredicted RBP17.67■□□□□ 0.42
CSTF3-202ENST00000431742 NEFLP07196 543 aa17.67■□□□□ 0.42
CSTF3-202ENST00000431742 RASGRF1Q13972 1273 aa17.67■□□□□ 0.42
CSTF3-202ENST00000431742 AGBL3Q8NEM8 1001 aa17.67■□□□□ 0.42
CSTF3-202ENST00000431742 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
CSTF3-202ENST00000431742 DPF2Q92785 391 aa17.67■□□□□ 0.42
CSTF3-202ENST00000431742 ZNF512BQ96KM6 892 aaPredicted RBP17.67■□□□□ 0.42
CSTF3-202ENST00000431742 MXD3Q9BW11 206 aa17.67■□□□□ 0.42
CSTF3-202ENST00000431742 NMRK2Q9NPI5 230 aa17.67■□□□□ 0.42
CSTF3-202ENST00000431742 ZBTB12Q9Y330 459 aaPredicted RBP17.67■□□□□ 0.42
CSTF3-202ENST00000431742 GORABQ5T7V8 394 aa17.66■□□□□ 0.42
CSTF3-202ENST00000431742 GPRC5DQ9NZD1 345 aa17.66■□□□□ 0.42
CSTF3-202ENST00000431742 JAG2Q9Y219 1238 aa17.66■□□□□ 0.42
CSTF3-202ENST00000431742 MYH7P12883 1935 aa17.66■□□□□ 0.42
CSTF3-202ENST00000431742 MYH2Q9UKX2 1941 aa17.65■□□□□ 0.42
CSTF3-202ENST00000431742 UQCRFS1P1P0C7P4 283 aa17.65■□□□□ 0.42
CSTF3-202ENST00000431742 FBXW7Q969H0 707 aa17.65■□□□□ 0.42
CSTF3-202ENST00000431742 GPBP1L1Q9HC44 474 aaPredicted RBP17.65■□□□□ 0.42
CSTF3-202ENST00000431742 DENND2AQ9ULE3 1009 aa17.65■□□□□ 0.42
CSTF3-202ENST00000431742 SALL1Q9NSC2 1324 aa17.65■□□□□ 0.42
CSTF3-202ENST00000431742 IQCA1LA6NCM1 817 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 FRAT2O75474 233 aaPredicted RBP17.64■□□□□ 0.41
CSTF3-202ENST00000431742 IFIT2P09913 472 aaKnown RBP17.64■□□□□ 0.41
CSTF3-202ENST00000431742 MCAMP43121 646 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 CHAF1AQ13111 956 aaPredicted RBP17.64■□□□□ 0.41
CSTF3-202ENST00000431742 SCARF1Q14162 830 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 CCDC158Q5M9N0 1113 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 MFSD14BQ5SR56 506 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 TBC1D22AQ8WUA7 517 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 RRAGCQ9HB90 399 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 HMG20BQ9P0W2 317 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 HACL1Q9UJ83 578 aa17.64■□□□□ 0.41
CSTF3-202ENST00000431742 SHTN1A0MZ66 631 aa17.63■□□□□ 0.41
CSTF3-202ENST00000431742 VEGFAP15692 232 aaPredicted RBP17.63■□□□□ 0.41
CSTF3-202ENST00000431742 LMOD1P29536 600 aaPredicted RBP17.63■□□□□ 0.41
CSTF3-202ENST00000431742 EPS15P42566 896 aa17.63■□□□□ 0.41
CSTF3-202ENST00000431742 ZNF280AP59817 542 aaPredicted RBP17.63■□□□□ 0.41
CSTF3-202ENST00000431742 TTC39AQ5SRH9 613 aa17.63■□□□□ 0.41
CSTF3-202ENST00000431742 MICALL2Q8IY33 904 aa17.63■□□□□ 0.41
CSTF3-202ENST00000431742 WDR66Q8TBY9 1149 aa17.63■□□□□ 0.41
CSTF3-202ENST00000431742 TAF1DQ9H5J8 278 aaPredicted RBP17.63■□□□□ 0.41
CSTF3-202ENST00000431742 KIF3CO14782 793 aa17.62■□□□□ 0.41
CSTF3-202ENST00000431742 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
CSTF3-202ENST00000431742 ANKRD45Q5TZF3 282 aa17.62■□□□□ 0.41
CSTF3-202ENST00000431742 PI16Q6UXB8 463 aa17.62■□□□□ 0.41
CSTF3-202ENST00000431742 SPATA5Q8NB90 893 aa17.62■□□□□ 0.41
CSTF3-202ENST00000431742 CNOT7Q9UIV1 285 aaKnown RBP17.62■□□□□ 0.41
CSTF3-202ENST00000431742 SALL3Q9BXA9 1300 aa17.62■□□□□ 0.41
CSTF3-202ENST00000431742 POLR2AP24928 1970 aaKnown RBP17.62■□□□□ 0.41
CSTF3-202ENST00000431742 USP17L8P0C7I0 530 aa17.61■□□□□ 0.41
CSTF3-202ENST00000431742 EPHX2P34913 555 aa17.61■□□□□ 0.41
CSTF3-202ENST00000431742 MMP14P50281 582 aa17.61■□□□□ 0.41
CSTF3-202ENST00000431742 NUCB1Q02818 461 aa17.61■□□□□ 0.41
CSTF3-202ENST00000431742 GRIK5Q16478 980 aa17.61■□□□□ 0.41
CSTF3-202ENST00000431742 ERICH6BQ5W0A0 696 aa17.61■□□□□ 0.41
CSTF3-202ENST00000431742 KIAA0825Q8IV33 1275 aa17.61■□□□□ 0.41
CSTF3-202ENST00000431742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.61■□□□□ 0.41
CSTF3-202ENST00000431742 ADARB2Q9NS39 739 aaKnown RBP17.61■□□□□ 0.41
CSTF3-202ENST00000431742 SUGT1Q9Y2Z0 365 aa17.61■□□□□ 0.41
CSTF3-202ENST00000431742 OTUD7AQ8TE49 926 aaPredicted RBP17.6■□□□□ 0.41
CSTF3-202ENST00000431742 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
CSTF3-202ENST00000431742 ATP5JP18859 108 aa17.59■□□□□ 0.41
CSTF3-202ENST00000431742 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
CSTF3-202ENST00000431742 TRPM4Q8TD43 1214 aa17.59■□□□□ 0.41
CSTF3-202ENST00000431742 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
CSTF3-202ENST00000431742 H7C1D1 291 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 EGFRP00533 1210 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 PRDX5P30044 214 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 B4GALNT3Q6L9W6 998 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 USP50Q70EL3 339 aaPredicted RBP17.58■□□□□ 0.4
CSTF3-202ENST00000431742 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 ZGPATQ8N5A5 531 aaKnown RBP17.58■□□□□ 0.4
CSTF3-202ENST00000431742 LNPKQ9C0E8 428 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 SNRKQ9NRH2 765 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 CDK5RAP2Q96SN8 1893 aa17.58■□□□□ 0.4
CSTF3-202ENST00000431742 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
CSTF3-202ENST00000431742 CYP2E1P05181 493 aaPredicted RBP17.57■□□□□ 0.4
CSTF3-202ENST00000431742 ZAP70P43403 619 aa17.57■□□□□ 0.4
CSTF3-202ENST00000431742 HIRAP54198 1017 aaPredicted RBP17.57■□□□□ 0.4
CSTF3-202ENST00000431742 SAMD7Q7Z3H4 446 aa17.57■□□□□ 0.4
CSTF3-202ENST00000431742 PNMA8AQ86V59 439 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms