RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 WTIPA6NIX2 430 aaPredicted RBP19.02■□□□□ 0.64
PTCD1-204ENST00000430982 KCNJ4P48050 445 aa19.02■□□□□ 0.64
PTCD1-204ENST00000430982 TMEM57Q8N5G2 664 aa19.02■□□□□ 0.64
PTCD1-204ENST00000430982 HELBQ8NG08 1087 aaPredicted RBP19.02■□□□□ 0.64
PTCD1-204ENST00000430982 ZNF296Q8WUU4 475 aaPredicted RBP19.02■□□□□ 0.64
PTCD1-204ENST00000430982 HDAC5Q9UQL6 1122 aa19.02■□□□□ 0.64
PTCD1-204ENST00000430982 LEMD3Q9Y2U8 911 aa19.02■□□□□ 0.64
PTCD1-204ENST00000430982 LRRFIP2Q9Y608 721 aaKnown RBP19.02■□□□□ 0.64
PTCD1-204ENST00000430982 PITPNM2Q9BZ72 1349 aa19.01■□□□□ 0.63
PTCD1-204ENST00000430982 PLIN1O60240 522 aa19.01■□□□□ 0.63
PTCD1-204ENST00000430982 GNAI3P08754 354 aa19.01■□□□□ 0.63
PTCD1-204ENST00000430982 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
PTCD1-204ENST00000430982 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
PTCD1-204ENST00000430982 ZNF804BA4D1E1 1349 aa19■□□□□ 0.63
PTCD1-204ENST00000430982 TAF5LO75529 589 aa19■□□□□ 0.63
PTCD1-204ENST00000430982 ANGEL2Q5VTE6 544 aaKnown RBP19■□□□□ 0.63
PTCD1-204ENST00000430982 GMLQ99445 158 aa19■□□□□ 0.63
PTCD1-204ENST00000430982 CFHR5Q9BXR6 569 aa19■□□□□ 0.63
PTCD1-204ENST00000430982 PUS3Q9BZE2 481 aaKnown RBP19■□□□□ 0.63
PTCD1-204ENST00000430982 MKI67P46013 3256 aaKnown RBP18.99■□□□□ 0.63
PTCD1-204ENST00000430982 AGBL3Q8NEM8 1001 aa18.99■□□□□ 0.63
PTCD1-204ENST00000430982 KLHDC4Q8TBB5 520 aa18.99■□□□□ 0.63
PTCD1-204ENST00000430982 GCC1Q96CN9 775 aa18.99■□□□□ 0.63
PTCD1-204ENST00000430982 MED23Q9ULK4 1368 aa18.98■□□□□ 0.63
PTCD1-204ENST00000430982 TM4SF4P48230 202 aa18.98■□□□□ 0.63
PTCD1-204ENST00000430982 SCARF1Q14162 830 aa18.98■□□□□ 0.63
PTCD1-204ENST00000430982 FBXO46Q6PJ61 603 aaPredicted RBP18.98■□□□□ 0.63
PTCD1-204ENST00000430982 ITPRIPQ8IWB1 547 aa18.98■□□□□ 0.63
PTCD1-204ENST00000430982 ZNF646O15015 1829 aaPredicted RBP18.97■□□□□ 0.63
PTCD1-204ENST00000430982 SNAP23O00161 211 aa18.97■□□□□ 0.63
PTCD1-204ENST00000430982 TBC1D8O95759 1140 aa18.97■□□□□ 0.63
PTCD1-204ENST00000430982 RLBP1P12271 317 aa18.97■□□□□ 0.63
PTCD1-204ENST00000430982 KLRK1P26718 216 aa18.97■□□□□ 0.63
PTCD1-204ENST00000430982 LRRC24Q50LG9 513 aa18.97■□□□□ 0.63
PTCD1-204ENST00000430982 RSBN1LQ6PCB5 846 aaPredicted RBP18.97■□□□□ 0.63
PTCD1-204ENST00000430982 HDAC9Q9UKV0 1011 aa18.97■□□□□ 0.63
PTCD1-204ENST00000430982 GPR25O00155 361 aa18.96■□□□□ 0.63
PTCD1-204ENST00000430982 RFX5P48382 616 aaPredicted RBP18.96■□□□□ 0.63
PTCD1-204ENST00000430982 MOB2Q70IA6 237 aa18.96■□□□□ 0.63
PTCD1-204ENST00000430982 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
PTCD1-204ENST00000430982 RIPOR2Q9Y4F9 1068 aa18.96■□□□□ 0.63
PTCD1-204ENST00000430982 GNAI2P04899 355 aa18.95■□□□□ 0.62
PTCD1-204ENST00000430982 METTL24Q5JXM2 366 aa18.95■□□□□ 0.62
PTCD1-204ENST00000430982 PANK1Q8TE04 598 aa18.95■□□□□ 0.62
PTCD1-204ENST00000430982 MYOZ2Q9NPC6 264 aa18.95■□□□□ 0.62
PTCD1-204ENST00000430982 MROH5Q6ZUA9 1318 aa18.95■□□□□ 0.62
PTCD1-204ENST00000430982 RBBP6Q7Z6E9 1792 aaKnown RBP18.94■□□□□ 0.62
PTCD1-204ENST00000430982 MS4A1P11836 297 aa18.94■□□□□ 0.62
PTCD1-204ENST00000430982 PODNQ7Z5L7 613 aa18.94■□□□□ 0.62
PTCD1-204ENST00000430982 COA1Q9GZY4 146 aa18.94■□□□□ 0.62
PTCD1-204ENST00000430982 LAMB1P07942 1786 aa18.93■□□□□ 0.62
PTCD1-204ENST00000430982 PTPN12Q05209 780 aaKnown RBP18.93■□□□□ 0.62
PTCD1-204ENST00000430982 HABP4Q5JVS0 413 aaKnown RBP18.93■□□□□ 0.62
PTCD1-204ENST00000430982 FBXW7Q969H0 707 aa18.93■□□□□ 0.62
PTCD1-204ENST00000430982 SIL1Q9H173 461 aa18.93■□□□□ 0.62
PTCD1-204ENST00000430982 EYA2O00167 538 aa18.92■□□□□ 0.62
PTCD1-204ENST00000430982 SRGAP3O43295 1099 aa18.92■□□□□ 0.62
PTCD1-204ENST00000430982 USP17L8P0C7I0 530 aa18.92■□□□□ 0.62
PTCD1-204ENST00000430982 USP17L3A6NCW0 530 aa18.91■□□□□ 0.62
PTCD1-204ENST00000430982 USP17L4A6NCW7 530 aa18.91■□□□□ 0.62
PTCD1-204ENST00000430982 UBE2Q2LH0YL09 131 aa18.91■□□□□ 0.62
PTCD1-204ENST00000430982 UBE4AQ14139 1066 aa18.91■□□□□ 0.62
PTCD1-204ENST00000430982 C15orf52Q6ZUT6 534 aaKnown RBP18.91■□□□□ 0.62
PTCD1-204ENST00000430982 USP17L1Q7RTZ2 530 aa18.91■□□□□ 0.62
PTCD1-204ENST00000430982 C1orf115Q9H7X2 142 aa18.91■□□□□ 0.62
PTCD1-204ENST00000430982 PA2G4Q9UQ80 394 aaKnown RBP18.91■□□□□ 0.62
PTCD1-204ENST00000430982 FKTNO75072 461 aa18.9■□□□□ 0.62
PTCD1-204ENST00000430982 ZNF804AQ7Z570 1209 aa18.9■□□□□ 0.62
PTCD1-204ENST00000430982 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.9■□□□□ 0.62
PTCD1-204ENST00000430982 R3HDMLQ9H3Y0 253 aa18.9■□□□□ 0.62
PTCD1-204ENST00000430982 CD209Q9NNX6 404 aa18.9■□□□□ 0.62
PTCD1-204ENST00000430982 IRS2Q9Y4H2 1338 aa18.9■□□□□ 0.62
PTCD1-204ENST00000430982 ZBTB7BO15156 539 aaPredicted RBP18.89■□□□□ 0.61
PTCD1-204ENST00000430982 PDE8BO95263 885 aa18.89■□□□□ 0.61
PTCD1-204ENST00000430982 SREBF2Q12772 1141 aa18.89■□□□□ 0.61
PTCD1-204ENST00000430982 MTX1Q13505 466 aa18.89■□□□□ 0.61
PTCD1-204ENST00000430982 SCAF8Q9UPN6 1271 aaKnown RBP18.89■□□□□ 0.61
PTCD1-204ENST00000430982 CENPFP49454 3210 aa18.89■□□□□ 0.61
PTCD1-204ENST00000430982 BRCA2P51587 3418 aa18.89■□□□□ 0.61
PTCD1-204ENST00000430982 CIAO1O76071 339 aa18.88■□□□□ 0.61
PTCD1-204ENST00000430982 NBPF9Q3BBW0 867 aa18.88■□□□□ 0.61
PTCD1-204ENST00000430982 ATG9AQ7Z3C6 839 aa18.88■□□□□ 0.61
PTCD1-204ENST00000430982 VGLL2Q8N8G2 317 aa18.88■□□□□ 0.61
PTCD1-204ENST00000430982 COPRSQ9NQ92 184 aa18.88■□□□□ 0.61
PTCD1-204ENST00000430982 FBXO3Q9UK99 471 aa18.88■□□□□ 0.61
PTCD1-204ENST00000430982 COG6Q9Y2V7 657 aa18.88■□□□□ 0.61
PTCD1-204ENST00000430982 PNMA6EA0A0J9YXQ4 647 aa18.87■□□□□ 0.61
PTCD1-204ENST00000430982 GYG1P46976 350 aa18.87■□□□□ 0.61
PTCD1-204ENST00000430982 GTF2IP78347 998 aa18.87■□□□□ 0.61
PTCD1-204ENST00000430982 MVPQ14764 893 aaKnown RBP18.87■□□□□ 0.61
PTCD1-204ENST00000430982 PRAMEF18Q5VWM3 479 aa18.87■□□□□ 0.61
PTCD1-204ENST00000430982 MXD3Q9BW11 206 aa18.87■□□□□ 0.61
PTCD1-204ENST00000430982 A0A1B0GUL6 1792 aa18.86■□□□□ 0.61
PTCD1-204ENST00000430982 WNT10BO00744 389 aa18.86■□□□□ 0.61
PTCD1-204ENST00000430982 IFIT1P09914 478 aaKnown RBP18.86■□□□□ 0.61
PTCD1-204ENST00000430982 HIBADHP31937 336 aaKnown RBP18.86■□□□□ 0.61
PTCD1-204ENST00000430982 IL15P40933 162 aaPredicted RBP18.86■□□□□ 0.61
PTCD1-204ENST00000430982 PUM3Q15397 648 aaKnown RBP18.86■□□□□ 0.61
PTCD1-204ENST00000430982 DACT2Q5SW24 774 aa18.86■□□□□ 0.61
PTCD1-204ENST00000430982 LDLRAD1Q5T700 205 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms