RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 RABL6Q3YEC7 729 aaPredicted RBP21.61■■□□□ 1.05
CPSF4-203ENST00000430038 LRRC24Q50LG9 513 aa21.61■■□□□ 1.05
CPSF4-203ENST00000430038 CCDC102AQ96A19 550 aa21.61■■□□□ 1.05
CPSF4-203ENST00000430038 ABHD8Q96I13 439 aa21.61■■□□□ 1.05
CPSF4-203ENST00000430038 FZD1Q9UP38 647 aa21.61■■□□□ 1.05
CPSF4-203ENST00000430038 ECM29Q5VYK3 1845 aa21.61■■□□□ 1.05
CPSF4-203ENST00000430038 F8W031 263 aaPredicted RBP21.6■■□□□ 1.05
CPSF4-203ENST00000430038 GYG1P46976 350 aa21.6■■□□□ 1.05
CPSF4-203ENST00000430038 TAF7LQ5H9L4 462 aa21.6■■□□□ 1.05
CPSF4-203ENST00000430038 KLHDC4Q8TBB5 520 aa21.6■■□□□ 1.05
CPSF4-203ENST00000430038 FAM84BQ96KN1 310 aaPredicted RBP21.6■■□□□ 1.05
CPSF4-203ENST00000430038 ZNF804AQ7Z570 1209 aa21.58■■□□□ 1.05
CPSF4-203ENST00000430038 TDRD7Q8NHU6 1098 aaKnown RBP21.58■■□□□ 1.05
CPSF4-203ENST00000430038 PRMT6Q96LA8 375 aaPredicted RBP21.58■■□□□ 1.05
CPSF4-203ENST00000430038 RNF186Q9NXI6 227 aa21.58■■□□□ 1.05
CPSF4-203ENST00000430038 PTPRCP08575 1304 aa21.57■■□□□ 1.04
CPSF4-203ENST00000430038 CA12O43570 354 aa21.57■■□□□ 1.04
CPSF4-203ENST00000430038 FKBP1BP68106 108 aa21.57■■□□□ 1.04
CPSF4-203ENST00000430038 GRIK5Q16478 980 aa21.57■■□□□ 1.04
CPSF4-203ENST00000430038 MTMR14Q8NCE2 650 aa21.57■■□□□ 1.04
CPSF4-203ENST00000430038 TRPA1O75762 1119 aa21.56■■□□□ 1.04
CPSF4-203ENST00000430038 PRKG1Q13976 671 aa21.56■■□□□ 1.04
CPSF4-203ENST00000430038 UBE4AQ14139 1066 aa21.56■■□□□ 1.04
CPSF4-203ENST00000430038 VGLL2Q8N8G2 317 aa21.56■■□□□ 1.04
CPSF4-203ENST00000430038 HDAC9Q9UKV0 1011 aa21.56■■□□□ 1.04
CPSF4-203ENST00000430038 FAM205AQ6ZU69 1335 aa21.55■■□□□ 1.04
CPSF4-203ENST00000430038 MMP14P50281 582 aa21.55■■□□□ 1.04
CPSF4-203ENST00000430038 DLGAP5Q15398 846 aa21.55■■□□□ 1.04
CPSF4-203ENST00000430038 CFAP100Q494V2 611 aa21.55■■□□□ 1.04
CPSF4-203ENST00000430038 SSC5DA1L4H1 1573 aa21.55■■□□□ 1.04
CPSF4-203ENST00000430038 HIBADHP31937 336 aaKnown RBP21.54■■□□□ 1.04
CPSF4-203ENST00000430038 RFX5P48382 616 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-203ENST00000430038 FKBP1AP62942 108 aaKnown RBP21.54■■□□□ 1.04
CPSF4-203ENST00000430038 PTPN12Q05209 780 aaKnown RBP21.54■■□□□ 1.04
CPSF4-203ENST00000430038 ALDH1L2Q3SY69 923 aa21.54■■□□□ 1.04
CPSF4-203ENST00000430038 MCOLN1Q9GZU1 580 aa21.54■■□□□ 1.04
CPSF4-203ENST00000430038 IQSEC3Q9UPP2 1182 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-203ENST00000430038 CLRN2A0PK11 232 aa21.53■■□□□ 1.04
CPSF4-203ENST00000430038 SPDYE2BA6NHP3 402 aa21.53■■□□□ 1.04
CPSF4-203ENST00000430038 SPDYE6P0CI01 402 aa21.53■■□□□ 1.04
CPSF4-203ENST00000430038 FBXO33Q7Z6M2 555 aa21.53■■□□□ 1.04
CPSF4-203ENST00000430038 DEFB129Q9H1M3 183 aa21.53■■□□□ 1.04
CPSF4-203ENST00000430038 ARAP2Q8WZ64 1704 aa21.52■■□□□ 1.04
CPSF4-203ENST00000430038 TTLL12Q14166 644 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-203ENST00000430038 APOBEC3FQ8IUX4 373 aaKnown RBP21.52■■□□□ 1.04
CPSF4-203ENST00000430038 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
CPSF4-203ENST00000430038 NOB1Q9ULX3 412 aaKnown RBP21.52■■□□□ 1.04
CPSF4-203ENST00000430038 MROH5Q6ZUA9 1318 aa21.52■■□□□ 1.03
CPSF4-203ENST00000430038 MKRN3Q13064 507 aaKnown RBP21.51■■□□□ 1.03
CPSF4-203ENST00000430038 MFSD14BQ5SR56 506 aa21.51■■□□□ 1.03
CPSF4-203ENST00000430038 LDLRAD1Q5T700 205 aa21.51■■□□□ 1.03
CPSF4-203ENST00000430038 SAGE1Q9NXZ1 904 aa21.51■■□□□ 1.03
CPSF4-203ENST00000430038 CCER2I3L3R5 266 aa21.5■■□□□ 1.03
CPSF4-203ENST00000430038 PDE8BO95263 885 aa21.5■■□□□ 1.03
CPSF4-203ENST00000430038 FGFR2P21802 821 aa21.49■■□□□ 1.03
CPSF4-203ENST00000430038 BCAMP50895 628 aa21.49■■□□□ 1.03
CPSF4-203ENST00000430038 DGKZQ13574 1117 aa21.49■■□□□ 1.03
CPSF4-203ENST00000430038 METTL24Q5JXM2 366 aa21.49■■□□□ 1.03
CPSF4-203ENST00000430038 NBPF12Q5TAG4 269 aaPredicted RBP21.49■■□□□ 1.03
CPSF4-203ENST00000430038 CDAN1Q8IWY9 1227 aa21.49■■□□□ 1.03
CPSF4-203ENST00000430038 ANGEL1Q9UNK9 670 aaKnown RBP21.49■■□□□ 1.03
CPSF4-203ENST00000430038 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
CPSF4-203ENST00000430038 CLMNQ96JQ2 1002 aa21.48■■□□□ 1.03
CPSF4-203ENST00000430038 TTF2Q9UNY4 1162 aaKnown RBP21.48■■□□□ 1.03
CPSF4-203ENST00000430038 CCDC85CA6NKD9 419 aa21.47■■□□□ 1.03
CPSF4-203ENST00000430038 NF2P35240 595 aa21.47■■□□□ 1.03
CPSF4-203ENST00000430038 R3HDMLQ9H3Y0 253 aa21.47■■□□□ 1.03
CPSF4-203ENST00000430038 TDRD3Q9H7E2 651 aaKnown RBP21.47■■□□□ 1.03
CPSF4-203ENST00000430038 VEZTQ9HBM0 779 aa21.47■■□□□ 1.03
CPSF4-203ENST00000430038 TBC1D8O95759 1140 aa21.46■■□□□ 1.03
CPSF4-203ENST00000430038 TM4SF4P48230 202 aa21.46■■□□□ 1.03
CPSF4-203ENST00000430038 RBM5P52756 815 aaKnown RBP eCLIP21.46■■□□□ 1.033e-9■□□□□ 10.6
CPSF4-203ENST00000430038 RARSP54136 660 aaKnown RBP21.46■■□□□ 1.03
CPSF4-203ENST00000430038 MAP3K11Q16584 847 aa21.46■■□□□ 1.03
CPSF4-203ENST00000430038 ARMC9Q7Z3E5 817 aa21.46■■□□□ 1.03
CPSF4-203ENST00000430038 ZNF70Q9UC06 446 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-203ENST00000430038 COL1A1P02452 1464 aaPredicted RBP21.45■■□□□ 1.03
CPSF4-203ENST00000430038 OTOFQ9HC10 1997 aa21.45■■□□□ 1.02
CPSF4-203ENST00000430038 EYA2O00167 538 aa21.45■■□□□ 1.02
CPSF4-203ENST00000430038 USP2O75604 605 aaPredicted RBP21.45■■□□□ 1.02
CPSF4-203ENST00000430038 CHAF1AQ13111 956 aaPredicted RBP21.45■■□□□ 1.02
CPSF4-203ENST00000430038 RASA3Q14644 834 aa21.45■■□□□ 1.02
CPSF4-203ENST00000430038 SPDYE2Q495Y8 402 aa21.45■■□□□ 1.02
CPSF4-203ENST00000430038 SPRYD7Q5W111 196 aa21.45■■□□□ 1.02
CPSF4-203ENST00000430038 DZIP1LQ8IYY4 767 aaKnown RBP21.45■■□□□ 1.02
CPSF4-203ENST00000430038 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.45■■□□□ 1.02
CPSF4-203ENST00000430038 TNNQ9UQP3 1299 aa21.45■■□□□ 1.02
CPSF4-203ENST00000430038 CRKP46108 304 aa21.44■■□□□ 1.02
CPSF4-203ENST00000430038 TEPSINQ96N21 525 aa21.44■■□□□ 1.02
CPSF4-203ENST00000430038 SERPINA10Q9UK55 444 aa21.44■■□□□ 1.02
CPSF4-203ENST00000430038 MYH13Q9UKX3 1938 aa21.44■■□□□ 1.02
CPSF4-203ENST00000430038 LAMB1P07942 1786 aa21.43■■□□□ 1.02
CPSF4-203ENST00000430038 REM2Q8IYK8 340 aaPredicted RBP21.43■■□□□ 1.02
CPSF4-203ENST00000430038 PPP2R3BQ9Y5P8 575 aa21.43■■□□□ 1.02
CPSF4-203ENST00000430038 CT47B1P0C2W7 299 aaPredicted RBP21.42■■□□□ 1.02
CPSF4-203ENST00000430038 GJA5P36382 358 aa21.42■■□□□ 1.02
CPSF4-203ENST00000430038 MEIS3Q99687 375 aa21.42■■□□□ 1.02
CPSF4-203ENST00000430038 SIL1Q9H173 461 aa21.42■■□□□ 1.02
CPSF4-203ENST00000430038 PA2G4Q9UQ80 394 aaKnown RBP21.42■■□□□ 1.02
CPSF4-203ENST00000430038 LRRFIP2Q9Y608 721 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms