RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 A0A096LPE4 126 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 A0A1W2PPZ6 126 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 SMAD7O15105 426 aaKnown RBP6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 DNAJC6O75061 913 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 CDC45O75419 566 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 GIPRP48546 466 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 MPP2Q14168 576 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 CWF19L2Q2TBE0 894 aaKnown RBP6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 SEZ6Q53EL9 994 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 COL13A1Q5TAT6 717 aaPredicted RBP6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 TRIM67Q6ZTA4 783 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 TRPM4Q8TD43 1214 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 MICAL1Q8TDZ2 1067 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 GATAD2BQ8WXI9 593 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 GAS2L1Q99501 681 aaPredicted RBP6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 SLKQ9H2G2 1235 aaPredicted RBP6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 ZNF576Q9H609 170 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 SPC25Q9HBM1 224 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 IFT57Q9NWB7 429 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 SAMM50Q9Y512 469 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 COL4A3BPQ9Y5P4 624 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 NFKBIEO00221 500 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 IMPDH2P12268 514 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 NFKB1P19838 968 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 LMNB1P20700 586 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 ZNF165P49910 485 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 NRLP54845 237 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 CHMP4BP1P59074 171 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 ARSHQ5FYA8 562 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 FILIP1Q7Z7B0 1213 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 REXO1Q8N1G1 1221 aaKnown RBP6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 SH3TC2Q8TF17 1288 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 APPBP2Q92624 585 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 NXPE3Q969Y0 559 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 CRBNQ96SW2 442 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 CHMP4AQ9BY43 222 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 PPT2Q9UMR5 302 aa6.49□□□□□ -1.37
NUDCD1-202ENST00000427660 PPP1R12AO14974 1030 aaPredicted RBP6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 TNP2Q05952 138 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 RASGRF1Q13972 1273 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 DDR2Q16832 855 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 SPRED3Q2MJR0 410 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 MIR1-1HGQ9H1L0 117 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 TMEM39AQ9NV64 488 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 ACTR10Q9NZ32 417 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 FIGNL2A6NMB9 653 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 KHNYNO15037 678 aaKnown RBP6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 MARCH6O60337 910 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 F13A1P00488 732 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 ACPPP15309 386 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 PPP2R3AQ06190 1150 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 IFRD2Q12894 506 aaPredicted RBP6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 CCDC81Q6ZN84 652 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 DHX32Q7L7V1 743 aaKnown RBP6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 FERD3LQ96RJ6 166 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 PCDH12Q9NPG4 1184 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 MARK1Q9P0L2 795 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 GPN3Q9UHW5 284 aaPredicted RBP6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 CYP8B1Q9UNU6 501 aa6.48□□□□□ -1.37
NUDCD1-202ENST00000427660 FAM221AA4D161 298 aa6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 MAPTP10636 758 aaKnown RBP6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 SPEM2Q0P670 501 aa6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.47□□□□□ -1.372e-6■□□□□ 8.3
NUDCD1-202ENST00000427660 TAF7LQ5H9L4 462 aa6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 BNC2Q6ZN30 1099 aaPredicted RBP6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 HOMER1Q86YM7 354 aa6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 CELF2-AS1Q8N7Q2 184 aa6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 FAM169BQ8N8A8 192 aa6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 RBBP8NLQ8NC74 664 aaPredicted RBP6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 FANCLQ9NW38 375 aa6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 ZNRF3Q9ULT6 936 aa6.47□□□□□ -1.37
NUDCD1-202ENST00000427660 DCDC2BA2VCK2 349 aa6.46□□□□□ -1.37
NUDCD1-202ENST00000427660 METTL12A8MUP2 240 aa6.46□□□□□ -1.37
NUDCD1-202ENST00000427660 PDE2AO00408 941 aaPredicted RBP6.46□□□□□ -1.37
NUDCD1-202ENST00000427660 PDPK1O15530 556 aa6.46□□□□□ -1.37
NUDCD1-202ENST00000427660 PAGE1O75459 146 aa6.46□□□□□ -1.37
NUDCD1-202ENST00000427660 FAAP100Q0VG06 881 aa6.46□□□□□ -1.37
NUDCD1-202ENST00000427660 KIAA0907Q7Z7F0 614 aaPredicted RBP6.46□□□□□ -1.37
NUDCD1-202ENST00000427660 DNAJC7Q99615 494 aa6.46□□□□□ -1.37
NUDCD1-202ENST00000427660 CCDC85CA6NKD9 419 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 CILPO75339 1184 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 CASP7P55210 303 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 GPLD1P80108 840 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 UBAP2LQ14157 1087 aaKnown RBP6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 LRRC14Q15048 493 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 SCARA3Q6AZY7 606 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 REC114Q7Z4M0 266 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 LILRB2Q8N423 598 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 PBX4Q9BYU1 374 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 TMEM260Q9NX78 707 aa6.46□□□□□ -1.38
NUDCD1-202ENST00000427660 SENP3-EIF4A1A0A087X0R7 540 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 H7C1W4 665 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 TRPA1O75762 1119 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 THBS1P07996 1170 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 MCM4P33991 863 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 NEUROD1Q13562 356 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 PCSK7Q16549 785 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 FXNQ16595 210 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 FBXO27Q8NI29 283 aa6.45□□□□□ -1.38
NUDCD1-202ENST00000427660 NSUN5Q96P11 429 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms