RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 ZNF296Q8WUU4 475 aaPredicted RBP7.35□□□□□ -1.23
LINC00400-201ENST00000425609 SOX13Q9UN79 622 aa7.35□□□□□ -1.23
LINC00400-201ENST00000425609 SMNDC1O75940 238 aaKnown RBP eCLIP7.34□□□□□ -1.23
LINC00400-201ENST00000425609 PF4P02776 101 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 ARAFP10398 606 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 CPB1P15086 417 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 MX2P20592 715 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 ADH7P40394 386 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
LINC00400-201ENST00000425609 LMNB2Q03252 620 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 RBL2Q08999 1139 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 PERM1Q5SV97 790 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 CEP135Q66GS9 1140 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 TTBK2Q6IQ55 1244 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 AGMOQ6ZNB7 445 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 DPH6Q7L8W6 267 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 FAM35AQ86V20 835 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 BSNDQ8WZ55 320 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 PLD4Q96BZ4 506 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 LPIN3Q9BQK8 851 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 NT5C1AQ9BXI3 368 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 LNPKQ9C0E8 428 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 RBSNQ9H1K0 784 aa7.34□□□□□ -1.23
LINC00400-201ENST00000425609 CLEC4MQ9H2X3 399 aaPredicted RBP7.34□□□□□ -1.23
LINC00400-201ENST00000425609 TFE3P19532 575 aaPredicted RBP7.33□□□□□ -1.24
LINC00400-201ENST00000425609 FAM160A1Q05DH4 1040 aa7.33□□□□□ -1.24
LINC00400-201ENST00000425609 PCNX4Q63HM2 1172 aa7.33□□□□□ -1.24
LINC00400-201ENST00000425609 VN1R5Q7Z5H4 357 aa7.33□□□□□ -1.24
LINC00400-201ENST00000425609 FCHSD1Q86WN1 690 aa7.33□□□□□ -1.24
LINC00400-201ENST00000425609 SEC16BQ96JE7 1060 aa7.33□□□□□ -1.24
LINC00400-201ENST00000425609 SPATA32Q96LK8 384 aa7.33□□□□□ -1.24
LINC00400-201ENST00000425609 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.33□□□□□ -1.24
LINC00400-201ENST00000425609 ADAM19Q9H013 955 aa7.33□□□□□ -1.24
LINC00400-201ENST00000425609 GPN3Q9UHW5 284 aaPredicted RBP7.33□□□□□ -1.24
LINC00400-201ENST00000425609 B3GALT4O96024 378 aa7.32□□□□□ -1.24
LINC00400-201ENST00000425609 ADH6P28332 368 aa7.32□□□□□ -1.24
LINC00400-201ENST00000425609 CAMK2GQ13555 558 aaPredicted RBP7.32□□□□□ -1.24
LINC00400-201ENST00000425609 ZNF423Q2M1K9 1284 aa7.32□□□□□ -1.24
LINC00400-201ENST00000425609 RASIP1Q5U651 963 aa7.32□□□□□ -1.24
LINC00400-201ENST00000425609 SMG9Q9H0W8 520 aaKnown RBP7.32□□□□□ -1.24
LINC00400-201ENST00000425609 TMEM39AQ9NV64 488 aa7.32□□□□□ -1.24
LINC00400-201ENST00000425609 FRRS1LQ9P0K9 344 aa7.32□□□□□ -1.24
LINC00400-201ENST00000425609 SUPT16HQ9Y5B9 1047 aaKnown RBP7.32□□□□□ -1.24
LINC00400-201ENST00000425609 PTPRAP18433 802 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 BMP6P22004 513 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 SOX9P48436 509 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 ZNF157P51786 506 aaPredicted RBP7.31□□□□□ -1.24
LINC00400-201ENST00000425609 PCDH1Q08174 1060 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 TRIM42Q8IWZ5 723 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 GPR161Q8N6U8 529 aaKnown RBP7.31□□□□□ -1.24
LINC00400-201ENST00000425609 GOLM1Q8NBJ4 401 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 MBIPQ9NS73 344 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 GINM1Q9NU53 330 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 UBP1Q9NZI7 540 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 TRIM33Q9UPN9 1127 aa7.31□□□□□ -1.24
LINC00400-201ENST00000425609 CRKP46108 304 aa7.3□□□□□ -1.24
LINC00400-201ENST00000425609 MAP2K3P46734 347 aa7.3□□□□□ -1.24
LINC00400-201ENST00000425609 NASPP49321 788 aaPredicted RBP7.3□□□□□ -1.24
LINC00400-201ENST00000425609 SNAP47Q5SQN1 464 aa7.3□□□□□ -1.24
LINC00400-201ENST00000425609 ELMSAN1Q6PJG2 1045 aa7.3□□□□□ -1.24
LINC00400-201ENST00000425609 FAM196AQ6ZSG2 479 aa7.3□□□□□ -1.24
LINC00400-201ENST00000425609 STK35Q8TDR2 534 aa7.3□□□□□ -1.24
LINC00400-201ENST00000425609 TTC9Q92623 222 aa7.3□□□□□ -1.24
LINC00400-201ENST00000425609 ELOA3CA0A087WX78 387 aaPredicted RBP7.29□□□□□ -1.24
LINC00400-201ENST00000425609 ELOA3DA6NLF2 546 aaPredicted RBP7.29□□□□□ -1.24
LINC00400-201ENST00000425609 NEURL1BA8MQ27 555 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 ESRRAP11474 423 aaPredicted RBP7.29□□□□□ -1.24
LINC00400-201ENST00000425609 PPP2R3AQ06190 1150 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 ELOA3BQ3SY89 546 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 Q6ZNB5 142 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 MICALL1Q8N3F8 863 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 ELOA3Q8NG57 546 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 HIRIP3Q9BW71 556 aaPredicted RBP7.29□□□□□ -1.24
LINC00400-201ENST00000425609 LRRC3Q9BY71 257 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 NXF1Q9UBU9 619 aaKnown RBP7.29□□□□□ -1.24
LINC00400-201ENST00000425609 EFR3BQ9Y2G0 817 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 PCDHB5Q9Y5E4 795 aa7.29□□□□□ -1.24
LINC00400-201ENST00000425609 STK10O94804 968 aaKnown RBP7.28□□□□□ -1.24
LINC00400-201ENST00000425609 F13A1P00488 732 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 EPHA1P21709 976 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 NME2P22392 152 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 COL9A2Q14055 689 aaPredicted RBP7.28□□□□□ -1.24
LINC00400-201ENST00000425609 GRIK5Q16478 980 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 PSAPL1Q6NUJ1 521 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 BNC2Q6ZN30 1099 aaPredicted RBP7.28□□□□□ -1.24
LINC00400-201ENST00000425609 CCDC84Q86UT8 332 aaPredicted RBP7.28□□□□□ -1.24
LINC00400-201ENST00000425609 SLITRK4Q8IW52 837 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 SULF2Q8IWU5 870 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 NPAS3Q8IXF0 933 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 FAM177A1Q8N128 213 aaPredicted RBP7.28□□□□□ -1.24
LINC00400-201ENST00000425609 LACRTQ9GZZ8 138 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 SH2B1Q9NRF2 756 aaPredicted RBP7.28□□□□□ -1.24
LINC00400-201ENST00000425609 GGA1Q9UJY5 639 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 STARD13Q9Y3M8 1113 aa7.28□□□□□ -1.24
LINC00400-201ENST00000425609 FAM221AA4D161 298 aa7.27□□□□□ -1.25
LINC00400-201ENST00000425609 H3BM21 787 aa7.27□□□□□ -1.25
LINC00400-201ENST00000425609 VSIG8P0DPA2 414 aa7.27□□□□□ -1.25
LINC00400-201ENST00000425609 APOBRQ0VD83 1088 aa7.27□□□□□ -1.25
LINC00400-201ENST00000425609 CCDC144BQ3MJ40 725 aa7.27□□□□□ -1.25
LINC00400-201ENST00000425609 GIMAP6Q6P9H5 292 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms