RNA–Protein interactions for RNA: ENST00000422143.2

TRBV29-1-201, Transcript of T cell receptor beta variable 29-1, humanhuman

APPRIS P1 BASIC

Gene TRBV29-1, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV29-1-201ENST00000422143 USP17L20D6RJB6 530 aa6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 SNRPA1P09661 255 aaKnown RBP6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 LMOD3Q0VAK6 560 aa6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 USP17L24Q0WX57 530 aa6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 USP4Q13107 963 aa6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 BABAM1Q9NWV8 329 aa6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 TSPYL4Q9UJ04 414 aa6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 MAP4K5Q9Y4K4 846 aa6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 LAS1LQ9Y4W2 734 aaKnown RBP6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 NUP188Q5SRE5 1749 aa6.79□□□□□ -1.32
TRBV29-1-201ENST00000422143 RREB1Q92766 1687 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 SCN11AQ9UI33 1791 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 CD2BP2O95400 341 aaKnown RBP6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 CANXP27824 592 aaKnown RBP6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 EIF5P55010 431 aaKnown RBP6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 CRTC2Q53ET0 693 aaPredicted RBP6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 TMEM164Q5U3C3 297 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 LRP10Q7Z4F1 713 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 ANKMY2Q8IV38 441 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 SPNS2Q8IVW8 549 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 OGFOD1Q8N543 542 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 TSPYL6Q8N831 410 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 C8orf58Q8NAV2 365 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 FAM200AQ8TCP9 573 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 TSR2Q969E8 191 aaKnown RBP6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 CCDC85AQ96PX6 553 aaPredicted RBP6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 IFT57Q9NWB7 429 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 SRP68Q9UHB9 627 aaKnown RBP6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 ZMIZ1Q9ULJ6 1067 aa6.78□□□□□ -1.32
TRBV29-1-201ENST00000422143 SOS1Q07889 1333 aaPredicted RBP6.77□□□□□ -1.32
TRBV29-1-201ENST00000422143 RGPD3A6NKT7 1758 aaPredicted RBP6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 RGPD4Q7Z3J3 1758 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 LY75O60449 1722 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 ELL2O00472 640 aaPredicted RBP6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 PPEF1O14829 653 aaPredicted RBP6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 STARD3NLO95772 234 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 SSFA2P28290 1259 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 PROSER3Q2NL68 480 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 MSL1Q68DK7 614 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 WDR63Q8IWG1 891 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 MPNDQ8N594 471 aa6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 TEX13AQ9BXU3 409 aaPredicted RBP6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 DNAAF2Q9NVR5 837 aaKnown RBP6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 RTCBQ9Y3I0 505 aaKnown RBP6.77□□□□□ -1.33
TRBV29-1-201ENST00000422143 ANXA1P04083 346 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 GYS1P13807 737 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 GNAI1P63096 354 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 SWI5Q1ZZU3 235 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 TSGA10IPQ3SY00 556 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 IFFO2Q5TF58 517 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 DUSP27Q5VZP5 1158 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 PPP1R18Q6NYC8 613 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 SIX5Q8N196 739 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 STK32AQ8WU08 396 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 CLP1Q92989 425 aaKnown RBP6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 KCTD15Q96SI1 283 aaPredicted RBP6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 MTFR1LQ9H019 292 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 IL16Q14005 1332 aa6.76□□□□□ -1.33
TRBV29-1-201ENST00000422143 SIPA1L3O60292 1781 aaPredicted RBP6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 CAMTA2O94983 1202 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 EIF2S2P20042 333 aaKnown RBP6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 IL6STP40189 918 aaPredicted RBP6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 GTF2IP78347 998 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 PLA2G2CQ5R387 149 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 USPL1Q5W0Q7 1092 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 FLAD1Q8NFF5 587 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 SLC16A10Q8TF71 515 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 CDK15Q96Q40 435 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 GZF1Q9H116 711 aaPredicted RBP6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 SPON1Q9HCB6 807 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 GNEQ9Y223 722 aaKnown RBP6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 RBM19Q9Y4C8 960 aaKnown RBP6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 C4BP0C0L5 1744 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 MYH14Q7Z406 1995 aaKnown RBP6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 USP42Q9H9J4 1324 aaKnown RBP6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 FANCIQ9NVI1 1328 aa6.75□□□□□ -1.33
TRBV29-1-201ENST00000422143 TCERG1O14776 1098 aaKnown RBP6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 ZBTB7BO15156 539 aaPredicted RBP6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 VAMP4O75379 141 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 MYCP01106 439 aaPredicted RBP6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 MYL6BP14649 208 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 TM4SF1P30408 202 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 RFC4P35249 363 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 CLDN10P78369 228 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 SKOR1P84550 965 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 CALD1Q05682 793 aaKnown RBP6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 DDR1Q08345 913 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 SLFN5Q08AF3 891 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 DPYDQ12882 1025 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 HLFQ16534 295 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 TMCO4Q5TGY1 634 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 TTLL7Q6ZT98 887 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 VASH1Q7L8A9 365 aaPredicted RBP6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 TRMT2AQ8IZ69 625 aaKnown RBP6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 NGEFQ8N5V2 710 aa6.74□□□□□ -1.33
TRBV29-1-201ENST00000422143 NARFQ9UHQ1 456 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms