RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 NDUFB9Q9Y6M9 179 aa19.2■□□□□ 0.66
DDX55-203ENST00000421670 TTC41PQ6P2S7 1318 aa19.2■□□□□ 0.66
DDX55-203ENST00000421670 TDRD7Q8NHU6 1098 aaKnown RBP19.19■□□□□ 0.66
DDX55-203ENST00000421670 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
DDX55-203ENST00000421670 KCNQ5Q9NR82 932 aa19.19■□□□□ 0.66
DDX55-203ENST00000421670 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
DDX55-203ENST00000421670 STAP2Q9UGK3 403 aa19.19■□□□□ 0.66
DDX55-203ENST00000421670 UQCRFS1P1P0C7P4 283 aa19.19■□□□□ 0.66
DDX55-203ENST00000421670 ATP5JP18859 108 aa19.19■□□□□ 0.66
DDX55-203ENST00000421670 CHAF1AQ13111 956 aaPredicted RBP19.19■□□□□ 0.66
DDX55-203ENST00000421670 BOLA2Q9H3K6 86 aa19.19■□□□□ 0.66
DDX55-203ENST00000421670 HMG20BQ9P0W2 317 aa19.19■□□□□ 0.66
DDX55-203ENST00000421670 C9orf131Q5VYM1 1079 aa19.18■□□□□ 0.66
DDX55-203ENST00000421670 PODNQ7Z5L7 613 aa19.18■□□□□ 0.66
DDX55-203ENST00000421670 FBXW7Q969H0 707 aa19.18■□□□□ 0.66
DDX55-203ENST00000421670 ZNF512BQ96KM6 892 aaPredicted RBP19.18■□□□□ 0.66
DDX55-203ENST00000421670 MAST2Q6P0Q8 1798 aa19.18■□□□□ 0.66
DDX55-203ENST00000421670 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
DDX55-203ENST00000421670 SPATA5Q8NB90 893 aa19.17■□□□□ 0.66
DDX55-203ENST00000421670 DNAJC2Q99543 621 aaKnown RBP19.17■□□□□ 0.66
DDX55-203ENST00000421670 OSBPL3Q9H4L5 887 aa19.17■□□□□ 0.66
DDX55-203ENST00000421670 ZNRF3Q9ULT6 936 aa19.17■□□□□ 0.66
DDX55-203ENST00000421670 AOX1Q06278 1338 aa19.16■□□□□ 0.66
DDX55-203ENST00000421670 SEMA3EO15041 775 aa19.16■□□□□ 0.66
DDX55-203ENST00000421670 ERC2O15083 957 aa19.16■□□□□ 0.66
DDX55-203ENST00000421670 RAD17O75943 681 aa19.16■□□□□ 0.66
DDX55-203ENST00000421670 MAP4K4O95819 1239 aaPredicted RBP19.16■□□□□ 0.66
DDX55-203ENST00000421670 ZAP70P43403 619 aa19.16■□□□□ 0.66
DDX55-203ENST00000421670 GTF2IP78347 998 aa19.16■□□□□ 0.66
DDX55-203ENST00000421670 DENND2AQ9ULE3 1009 aa19.16■□□□□ 0.66
DDX55-203ENST00000421670 ADAMTSL1Q8N6G6 1762 aa19.16■□□□□ 0.66
DDX55-203ENST00000421670 GLRX3O76003 335 aaKnown RBP19.15■□□□□ 0.66
DDX55-203ENST00000421670 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.15■□□□□ 0.66
DDX55-203ENST00000421670 EDC3Q96F86 508 aaKnown RBP19.15■□□□□ 0.66
DDX55-203ENST00000421670 ZNF541Q9H0D2 1346 aa19.15■□□□□ 0.66
DDX55-203ENST00000421670 HAUS7Q99871 368 aa19.15■□□□□ 0.66
DDX55-203ENST00000421670 MXD3Q9BW11 206 aa19.15■□□□□ 0.66
DDX55-203ENST00000421670 PDS5AQ29RF7 1337 aaKnown RBP19.14■□□□□ 0.65
DDX55-203ENST00000421670 FZD9O00144 591 aa19.14■□□□□ 0.65
DDX55-203ENST00000421670 CYP2E1P05181 493 aaPredicted RBP19.14■□□□□ 0.65
DDX55-203ENST00000421670 TTLL5Q6EMB2 1281 aa19.14■□□□□ 0.65
DDX55-203ENST00000421670 ANTXR1Q9H6X2 564 aa19.14■□□□□ 0.65
DDX55-203ENST00000421670 FAM205AQ6ZU69 1335 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 USP17L3A6NCW0 530 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 USP17L4A6NCW7 530 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 GOLIM4O00461 696 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 PSMD14O00487 310 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 GSPT1P15170 499 aaKnown RBP19.13■□□□□ 0.65
DDX55-203ENST00000421670 CXCL9Q07325 125 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 TTC22Q5TAA0 569 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 TBC1D9Q6ZT07 1266 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 USP17L1Q7RTZ2 530 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 MYH2Q9UKX2 1941 aa19.13■□□□□ 0.65
DDX55-203ENST00000421670 ZBTB22O15209 634 aa19.12■□□□□ 0.65
DDX55-203ENST00000421670 MFSD14BQ5SR56 506 aa19.12■□□□□ 0.65
DDX55-203ENST00000421670 DACT2Q5SW24 774 aa19.12■□□□□ 0.65
DDX55-203ENST00000421670 STRIP1Q5VSL9 837 aa19.12■□□□□ 0.65
DDX55-203ENST00000421670 PAG1Q9NWQ8 432 aa19.12■□□□□ 0.65
DDX55-203ENST00000421670 EIF6P56537 245 aaKnown RBP19.11■□□□□ 0.65
DDX55-203ENST00000421670 CIAPIN1Q6FI81 312 aa19.11■□□□□ 0.65
DDX55-203ENST00000421670 CERS5Q8N5B7 392 aa19.11■□□□□ 0.65
DDX55-203ENST00000421670 ABCF2Q9UG63 623 aa19.11■□□□□ 0.65
DDX55-203ENST00000421670 GRIK5Q16478 980 aa19.1■□□□□ 0.65
DDX55-203ENST00000421670 WDR66Q8TBY9 1149 aa19.1■□□□□ 0.65
DDX55-203ENST00000421670 PIH1D3Q9NQM4 214 aaKnown RBP19.1■□□□□ 0.65
DDX55-203ENST00000421670 ZBTB12Q9Y330 459 aaPredicted RBP19.1■□□□□ 0.65
DDX55-203ENST00000421670 GJA3Q9Y6H8 435 aa19.1■□□□□ 0.65
DDX55-203ENST00000421670 SALL1Q9NSC2 1324 aa19.09■□□□□ 0.65
DDX55-203ENST00000421670 TRIM6-TRIM34B2RNG4 842 aa19.09■□□□□ 0.65
DDX55-203ENST00000421670 PRDX5P30044 214 aa19.09■□□□□ 0.65
DDX55-203ENST00000421670 TBC1D22AQ8WUA7 517 aa19.09■□□□□ 0.65
DDX55-203ENST00000421670 VIL1P09327 827 aaKnown RBP19.08■□□□□ 0.65
DDX55-203ENST00000421670 TNIP1Q15025 636 aa19.08■□□□□ 0.65
DDX55-203ENST00000421670 RSBN1LQ6PCB5 846 aaPredicted RBP19.08■□□□□ 0.65
DDX55-203ENST00000421670 RILPL2Q969X0 211 aa19.08■□□□□ 0.65
DDX55-203ENST00000421670 ZC3H4Q9UPT8 1303 aaKnown RBP19.08■□□□□ 0.64
DDX55-203ENST00000421670 F8W031 263 aaPredicted RBP19.07■□□□□ 0.64
DDX55-203ENST00000421670 IDH1O75874 414 aaKnown RBP19.07■□□□□ 0.64
DDX55-203ENST00000421670 TTF1Q15361 905 aaPredicted RBP19.07■□□□□ 0.64
DDX55-203ENST00000421670 ZGPATQ8N5A5 531 aaKnown RBP19.07■□□□□ 0.64
DDX55-203ENST00000421670 LRP2BPQ9P2M1 347 aa19.07■□□□□ 0.64
DDX55-203ENST00000421670 SDSP20132 328 aa19.06■□□□□ 0.64
DDX55-203ENST00000421670 KIAA0825Q8IV33 1275 aa19.06■□□□□ 0.64
DDX55-203ENST00000421670 CNTROBQ8N137 903 aa19.06■□□□□ 0.64
DDX55-203ENST00000421670 LDHBP07195 334 aaKnown RBP19.06■□□□□ 0.64
DDX55-203ENST00000421670 FKBP1AP62942 108 aaKnown RBP19.06■□□□□ 0.64
DDX55-203ENST00000421670 GPC2Q8N158 579 aa19.06■□□□□ 0.64
DDX55-203ENST00000421670 KBTBD3Q8NAB2 608 aa19.06■□□□□ 0.64
DDX55-203ENST00000421670 EVI5LQ96CN4 794 aa19.06■□□□□ 0.64
DDX55-203ENST00000421670 FSD1Q9BTV5 496 aa19.06■□□□□ 0.64
DDX55-203ENST00000421670 RAI14Q9P0K7 980 aa19.06■□□□□ 0.64
DDX55-203ENST00000421670 MYO3BQ8WXR4 1341 aa19.05■□□□□ 0.64
DDX55-203ENST00000421670 DDNO94850 711 aaPredicted RBP19.05■□□□□ 0.64
DDX55-203ENST00000421670 CHGBP05060 677 aa19.05■□□□□ 0.64
DDX55-203ENST00000421670 GMPSP49915 693 aaPredicted RBP19.05■□□□□ 0.64
DDX55-203ENST00000421670 BMP2KLQ5H9B9 411 aa19.05■□□□□ 0.64
DDX55-203ENST00000421670 ERICH6Q7L0X2 663 aa19.05■□□□□ 0.64
DDX55-203ENST00000421670 GMLQ99445 158 aa19.05■□□□□ 0.64
DDX55-203ENST00000421670 TTF2Q9UNY4 1162 aaKnown RBP19.05■□□□□ 0.64
DDX55-203ENST00000421670 ECM29Q5VYK3 1845 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms