RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 COPRSQ9NQ92 184 aa26.64■■□□□ 1.86
CPNE1-211ENST00000420363 RCAN3Q9UKA8 241 aa26.64■■□□□ 1.86
CPNE1-211ENST00000420363 RLBP1P12271 317 aa26.63■■□□□ 1.85
CPNE1-211ENST00000420363 PUM3Q15397 648 aaKnown RBP26.62■■□□□ 1.85
CPNE1-211ENST00000420363 KRT26Q7Z3Y9 468 aa26.62■■□□□ 1.85
CPNE1-211ENST00000420363 ITPRIPQ8IWB1 547 aa26.62■■□□□ 1.85
CPNE1-211ENST00000420363 DCPSQ96C86 337 aaKnown RBP26.62■■□□□ 1.85
CPNE1-211ENST00000420363 TTLL5Q6EMB2 1281 aa26.61■■□□□ 1.85
CPNE1-211ENST00000420363 ATG9AQ7Z3C6 839 aa26.61■■□□□ 1.85
CPNE1-211ENST00000420363 SRGAP3O43295 1099 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 CA12O43570 354 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 EGFRP00533 1210 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 USP17L8P0C7I0 530 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 HUNKP57058 714 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 KIF4BQ2VIQ3 1234 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 DLK2Q6UY11 383 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 ABHD8Q96I13 439 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 TSKSQ9UJT2 592 aa26.6■■□□□ 1.85
CPNE1-211ENST00000420363 THSD7BQ9C0I4 1608 aa26.59■■□□□ 1.85
CPNE1-211ENST00000420363 FGFR2P21802 821 aa26.59■■□□□ 1.85
CPNE1-211ENST00000420363 IL15P40933 162 aaPredicted RBP26.59■■□□□ 1.85
CPNE1-211ENST00000420363 FKBP1AP62942 108 aaKnown RBP26.59■■□□□ 1.85
CPNE1-211ENST00000420363 FBXW7Q969H0 707 aa26.59■■□□□ 1.85
CPNE1-211ENST00000420363 FAM84BQ96KN1 310 aaPredicted RBP26.59■■□□□ 1.85
CPNE1-211ENST00000420363 HIBADHP31937 336 aaKnown RBP26.58■■□□□ 1.85
CPNE1-211ENST00000420363 GTF2IP78347 998 aa26.58■■□□□ 1.85
CPNE1-211ENST00000420363 SIL1Q9H173 461 aa26.58■■□□□ 1.85
CPNE1-211ENST00000420363 ZBTB7BO15156 539 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-211ENST00000420363 IFIT1P09914 478 aaKnown RBP26.57■■□□□ 1.84
CPNE1-211ENST00000420363 FBXO33Q7Z6M2 555 aa26.57■■□□□ 1.84
CPNE1-211ENST00000420363 C2orf69Q8N8R5 385 aa26.57■■□□□ 1.84
CPNE1-211ENST00000420363 TDRD7Q8NHU6 1098 aaKnown RBP26.57■■□□□ 1.84
CPNE1-211ENST00000420363 LPIN2Q92539 896 aa26.57■■□□□ 1.84
CPNE1-211ENST00000420363 PA2G4Q9UQ80 394 aaKnown RBP26.57■■□□□ 1.84
CPNE1-211ENST00000420363 FAM205AQ6ZU69 1335 aa26.57■■□□□ 1.84
CPNE1-211ENST00000420363 SASH1O94885 1247 aa26.56■■□□□ 1.84
CPNE1-211ENST00000420363 GYG1P46976 350 aa26.56■■□□□ 1.84
CPNE1-211ENST00000420363 NOGQ13253 232 aa26.56■■□□□ 1.84
CPNE1-211ENST00000420363 CAVIN4Q5BKX8 364 aa26.56■■□□□ 1.84
CPNE1-211ENST00000420363 OGFOD1Q8N543 542 aa26.56■■□□□ 1.84
CPNE1-211ENST00000420363 GBA2Q9HCG7 927 aaPredicted RBP26.56■■□□□ 1.84
CPNE1-211ENST00000420363 MYOZ2Q9NPC6 264 aa26.56■■□□□ 1.84
CPNE1-211ENST00000420363 MYH13Q9UKX3 1938 aa26.55■■□□□ 1.84
CPNE1-211ENST00000420363 ADM5C9JUS6 153 aa26.55■■□□□ 1.84
CPNE1-211ENST00000420363 SLC5A1P13866 664 aa26.55■■□□□ 1.84
CPNE1-211ENST00000420363 SULF1Q8IWU6 871 aa26.55■■□□□ 1.84
CPNE1-211ENST00000420363 PANK1Q8TE04 598 aa26.55■■□□□ 1.84
CPNE1-211ENST00000420363 MXD3Q9BW11 206 aa26.55■■□□□ 1.84
CPNE1-211ENST00000420363 CEP126Q9P2H0 1117 aa26.55■■□□□ 1.84
CPNE1-211ENST00000420363 VPS37DQ86XT2 251 aa26.54■■□□□ 1.84
CPNE1-211ENST00000420363 RGMBQ6NW40 437 aa26.53■■□□□ 1.84
CPNE1-211ENST00000420363 HDAC9Q9UKV0 1011 aa26.53■■□□□ 1.84
CPNE1-211ENST00000420363 PNMA6EA0A0J9YXQ4 647 aa26.52■■□□□ 1.84
CPNE1-211ENST00000420363 POLA2Q14181 598 aa26.52■■□□□ 1.84
CPNE1-211ENST00000420363 CERS5Q8N5B7 392 aa26.52■■□□□ 1.84
CPNE1-211ENST00000420363 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.52■■□□□ 1.84
CPNE1-211ENST00000420363 PITPNM2Q9BZ72 1349 aa26.52■■□□□ 1.84
CPNE1-211ENST00000420363 GGA3Q9NZ52 723 aa26.52■■□□□ 1.84
CPNE1-211ENST00000420363 ECM29Q5VYK3 1845 aa26.51■■□□□ 1.83
CPNE1-211ENST00000420363 MVPQ14764 893 aaKnown RBP26.51■■□□□ 1.83
CPNE1-211ENST00000420363 ATP2B3Q16720 1220 aa26.51■■□□□ 1.83
CPNE1-211ENST00000420363 KIAA0825Q8IV33 1275 aa26.51■■□□□ 1.83
CPNE1-211ENST00000420363 SSH3Q8TE77 659 aa26.51■■□□□ 1.83
CPNE1-211ENST00000420363 CCDC102AQ96A19 550 aa26.51■■□□□ 1.83
CPNE1-211ENST00000420363 ZBTB22O15209 634 aa26.5■■□□□ 1.83
CPNE1-211ENST00000420363 SCARF1Q14162 830 aa26.5■■□□□ 1.83
CPNE1-211ENST00000420363 ZIC5Q96T25 663 aa26.5■■□□□ 1.83
CPNE1-211ENST00000420363 DDX19BQ9UMR2 479 aa26.5■■□□□ 1.83
CPNE1-211ENST00000420363 POLR2AP24928 1970 aaKnown RBP26.49■■□□□ 1.83
CPNE1-211ENST00000420363 CCDC85CA6NKD9 419 aa26.49■■□□□ 1.83
CPNE1-211ENST00000420363 ZNF157P51786 506 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-211ENST00000420363 ATP8B2P98198 1209 aa26.49■■□□□ 1.83
CPNE1-211ENST00000420363 ASTN2O75129 1339 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-211ENST00000420363 PDE3AQ14432 1141 aa26.48■■□□□ 1.83
CPNE1-211ENST00000420363 MFSD14BQ5SR56 506 aa26.48■■□□□ 1.83
CPNE1-211ENST00000420363 MTMR14Q8NCE2 650 aa26.48■■□□□ 1.83
CPNE1-211ENST00000420363 TBC1D22AQ8WUA7 517 aa26.48■■□□□ 1.83
CPNE1-211ENST00000420363 ZBED3Q96IU2 234 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-211ENST00000420363 CHMP4BQ9H444 224 aaKnown RBP26.48■■□□□ 1.83
CPNE1-211ENST00000420363 C1orf115Q9H7X2 142 aa26.48■■□□□ 1.83
CPNE1-211ENST00000420363 BCAMP50895 628 aa26.47■■□□□ 1.83
CPNE1-211ENST00000420363 ANGEL2Q5VTE6 544 aaKnown RBP26.47■■□□□ 1.83
CPNE1-211ENST00000420363 AKAP2Q9Y2D5 859 aa26.47■■□□□ 1.83
CPNE1-211ENST00000420363 FAM155AB1AL88 458 aaPredicted RBP26.46■■□□□ 1.83
CPNE1-211ENST00000420363 WNT10BO00744 389 aa26.46■■□□□ 1.83
CPNE1-211ENST00000420363 CDCA5Q96FF9 252 aa26.46■■□□□ 1.83
CPNE1-211ENST00000420363 FRAT2O75474 233 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-211ENST00000420363 G3BP1Q13283 466 aaKnown RBP eCLIP26.45■■□□□ 1.827e-8■□□□□ 11.2
CPNE1-211ENST00000420363 CEP85Q6P2H3 762 aa26.45■■□□□ 1.82
CPNE1-211ENST00000420363 JAG2Q9Y219 1238 aa26.45■■□□□ 1.82
CPNE1-211ENST00000420363 COL1A1P02452 1464 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-211ENST00000420363 KIF23Q02241 960 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-211ENST00000420363 NBPF9Q3BBW0 867 aa26.44■■□□□ 1.82
CPNE1-211ENST00000420363 COG6Q9Y2V7 657 aa26.44■■□□□ 1.82
CPNE1-211ENST00000420363 TFCP2Q12800 502 aa26.43■■□□□ 1.82
CPNE1-211ENST00000420363 YTHDC1Q96MU7 727 aaKnown RBP26.43■■□□□ 1.82
CPNE1-211ENST00000420363 MCOLN1Q9GZU1 580 aa26.43■■□□□ 1.82
CPNE1-211ENST00000420363 GNL3LQ9NVN8 582 aaKnown RBP26.43■■□□□ 1.82
CPNE1-211ENST00000420363 IQSEC3Q9UPP2 1182 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-211ENST00000420363 SUGT1Q9Y2Z0 365 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms